RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 ERVH48-1M5A8F1 160 aa18.67■□□□□ 0.58
SSSCA1-206ENST00000531405 TPP1O14773 563 aa18.67■□□□□ 0.58
SSSCA1-206ENST00000531405 BUB1O43683 1085 aa18.67■□□□□ 0.58
SSSCA1-206ENST00000531405 TMCC1O94876 653 aa18.67■□□□□ 0.58
SSSCA1-206ENST00000531405 POP4O95707 220 aaKnown RBP18.67■□□□□ 0.58
SSSCA1-206ENST00000531405 PLEKP08567 350 aaPredicted RBP18.67■□□□□ 0.58
SSSCA1-206ENST00000531405 ERCC5P28715 1186 aaPredicted RBP18.67■□□□□ 0.58
SSSCA1-206ENST00000531405 HDAC4P56524 1084 aa18.67■□□□□ 0.58
SSSCA1-206ENST00000531405 CDR2Q01850 454 aa18.67■□□□□ 0.58
SSSCA1-206ENST00000531405 C1QBPQ07021 282 aaKnown RBP18.67■□□□□ 0.58
SSSCA1-206ENST00000531405 TCEA2Q15560 299 aa18.67■□□□□ 0.58
SSSCA1-206ENST00000531405 TAF1BQ53T94 588 aaPredicted RBP18.67■□□□□ 0.58
SSSCA1-206ENST00000531405 TCP11X2Q5H9J9 407 aa18.67■□□□□ 0.58
SSSCA1-206ENST00000531405 FOXR1Q6PIV2 292 aa18.67■□□□□ 0.58
SSSCA1-206ENST00000531405 GDPD4Q6W3E5 623 aa18.67■□□□□ 0.58
SSSCA1-206ENST00000531405 ZNF605Q86T29 641 aa18.67■□□□□ 0.58
SSSCA1-206ENST00000531405 TTC7BQ86TV6 843 aa18.67■□□□□ 0.58
SSSCA1-206ENST00000531405 FAM172AQ8WUF8 416 aa18.67■□□□□ 0.58
SSSCA1-206ENST00000531405 BTN2A2Q8WVV5 523 aa18.67■□□□□ 0.58
SSSCA1-206ENST00000531405 WRAP53Q9BUR4 548 aaKnown RBP18.67■□□□□ 0.58
SSSCA1-206ENST00000531405 OSBPL1AQ9BXW6 950 aa18.67■□□□□ 0.58
SSSCA1-206ENST00000531405 KLC2Q9H0B6 622 aa18.67■□□□□ 0.58
SSSCA1-206ENST00000531405 NOL6Q9H6R4 1146 aaKnown RBP18.67■□□□□ 0.58
SSSCA1-206ENST00000531405 ARHGEF17Q96PE2 2063 aaPredicted RBP18.66■□□□□ 0.58
SSSCA1-206ENST00000531405 KDELR3O43731 214 aa18.66■□□□□ 0.58
SSSCA1-206ENST00000531405 CELA2BP08218 269 aaPredicted RBP18.66■□□□□ 0.58
SSSCA1-206ENST00000531405 PTPN9P43378 593 aa18.66■□□□□ 0.58
SSSCA1-206ENST00000531405 UCNP55089 124 aa18.66■□□□□ 0.58
SSSCA1-206ENST00000531405 PTK2BQ14289 1009 aa18.66■□□□□ 0.58
SSSCA1-206ENST00000531405 FAXCQ5TGI0 409 aa18.66■□□□□ 0.58
SSSCA1-206ENST00000531405 RBM44Q6ZP01 1051 aaKnown RBP18.66■□□□□ 0.58
SSSCA1-206ENST00000531405 STRADAQ7RTN6 431 aa18.66■□□□□ 0.58
SSSCA1-206ENST00000531405 ZNF677Q86XU0 584 aa18.66■□□□□ 0.58
SSSCA1-206ENST00000531405 PYROXD2Q8N2H3 581 aa18.66■□□□□ 0.58
SSSCA1-206ENST00000531405 CENPIQ92674 756 aaPredicted RBP18.66■□□□□ 0.58
SSSCA1-206ENST00000531405 ARHGEF26Q96DR7 871 aa18.66■□□□□ 0.58
SSSCA1-206ENST00000531405 PRR11Q96HE9 360 aaPredicted RBP18.66■□□□□ 0.58
SSSCA1-206ENST00000531405 EPAS1Q99814 870 aa18.66■□□□□ 0.58
SSSCA1-206ENST00000531405 CLPBQ9H078 707 aa18.66■□□□□ 0.58
SSSCA1-206ENST00000531405 SYNDIG1Q9H7V2 258 aa18.66■□□□□ 0.58
SSSCA1-206ENST00000531405 LMO7DNF2Z398 122 aa18.65■□□□□ 0.58
SSSCA1-206ENST00000531405 EPHB6O15197 1021 aa18.65■□□□□ 0.58
SSSCA1-206ENST00000531405 INSIG1O15503 277 aa18.65■□□□□ 0.58
SSSCA1-206ENST00000531405 TM7SF2O76062 418 aa18.65■□□□□ 0.58
SSSCA1-206ENST00000531405 TSHRP16473 764 aa18.65■□□□□ 0.58
SSSCA1-206ENST00000531405 RBMS1P29558 406 aaKnown RBP18.65■□□□□ 0.58
SSSCA1-206ENST00000531405 EIF4A3P38919 411 aaKnown RBP18.65■□□□□ 0.58
SSSCA1-206ENST00000531405 POLR2FP61218 127 aaKnown RBP18.65■□□□□ 0.58
SSSCA1-206ENST00000531405 PTP4A2Q12974 167 aa18.65■□□□□ 0.58
SSSCA1-206ENST00000531405 KLHL40Q2TBA0 621 aa18.65■□□□□ 0.58
SSSCA1-206ENST00000531405 C6orf132Q5T0Z8 1188 aa18.65■□□□□ 0.58
SSSCA1-206ENST00000531405 MACC1Q6ZN28 852 aa18.65■□□□□ 0.58
SSSCA1-206ENST00000531405 TP53I13Q8NBR0 393 aaPredicted RBP18.65■□□□□ 0.58
SSSCA1-206ENST00000531405 CXorf40AQ8TE69 158 aa18.65■□□□□ 0.58
SSSCA1-206ENST00000531405 GDAP1L1Q96MZ0 367 aa18.65■□□□□ 0.58
SSSCA1-206ENST00000531405 SLC46A1Q96NT5 459 aa18.65■□□□□ 0.58
SSSCA1-206ENST00000531405 CCDC3Q9BQI4 270 aa18.65■□□□□ 0.58
SSSCA1-206ENST00000531405 SLC13A1Q9BZW2 595 aa18.65■□□□□ 0.58
SSSCA1-206ENST00000531405 TTYH3Q9C0H2 523 aa18.65■□□□□ 0.58
SSSCA1-206ENST00000531405 VPS16Q9H269 839 aa18.65■□□□□ 0.58
SSSCA1-206ENST00000531405 RETREG1Q9H6L5 497 aa18.65■□□□□ 0.58
SSSCA1-206ENST00000531405 NLRC4Q9NPP4 1024 aa18.65■□□□□ 0.58
SSSCA1-206ENST00000531405 FAM207AQ9NSI2 230 aaPredicted RBP18.65■□□□□ 0.58
SSSCA1-206ENST00000531405 DACH1Q9UI36 760 aa18.65■□□□□ 0.58
SSSCA1-206ENST00000531405 COQ6Q9Y2Z9 468 aa18.65■□□□□ 0.58
SSSCA1-206ENST00000531405 MYO18BQ8IUG5 2567 aa18.64■□□□□ 0.57
SSSCA1-206ENST00000531405 YY2O15391 372 aa18.64■□□□□ 0.57
SSSCA1-206ENST00000531405 ANXA6P08133 673 aa18.64■□□□□ 0.57
SSSCA1-206ENST00000531405 TIMP2P16035 220 aa18.64■□□□□ 0.57
SSSCA1-206ENST00000531405 EEF1GP26641 437 aaKnown RBP18.64■□□□□ 0.57
SSSCA1-206ENST00000531405 RFC1P35251 1148 aaPredicted RBP18.64■□□□□ 0.57
SSSCA1-206ENST00000531405 SOX5P35711 763 aa18.64■□□□□ 0.57
SSSCA1-206ENST00000531405 RPIAP49247 311 aa18.64■□□□□ 0.57
SSSCA1-206ENST00000531405 PDX1P52945 283 aa18.64■□□□□ 0.57
SSSCA1-206ENST00000531405 JAM2P57087 298 aa18.64■□□□□ 0.57
SSSCA1-206ENST00000531405 RHOAP61586 193 aa18.64■□□□□ 0.57
SSSCA1-206ENST00000531405 RHDQ02161 417 aa18.64■□□□□ 0.57
SSSCA1-206ENST00000531405 IRF4Q15306 451 aa18.64■□□□□ 0.57
SSSCA1-206ENST00000531405 IGF2-ASQ6U949 168 aa18.64■□□□□ 0.57
SSSCA1-206ENST00000531405 NYAP1Q6ZVC0 841 aa18.64■□□□□ 0.57
SSSCA1-206ENST00000531405 TPCN2Q8NHX9 752 aa18.64■□□□□ 0.57
SSSCA1-206ENST00000531405 GLMNQ92990 594 aa18.64■□□□□ 0.57
SSSCA1-206ENST00000531405 EXOC2Q96KP1 924 aa18.64■□□□□ 0.57
SSSCA1-206ENST00000531405 PCDHB18PQ96TA0 734 aa18.64■□□□□ 0.57
SSSCA1-206ENST00000531405 DPH1Q9BZG8 443 aa18.64■□□□□ 0.57
SSSCA1-206ENST00000531405 SEMA4CQ9C0C4 833 aa18.64■□□□□ 0.57
SSSCA1-206ENST00000531405 AHCTF1Q8WYP5 2266 aa18.63■□□□□ 0.57
SSSCA1-206ENST00000531405 ZSCAN5CA6NGD5 496 aaPredicted RBP18.63■□□□□ 0.57
SSSCA1-206ENST00000531405 TCEA3O75764 348 aa18.63■□□□□ 0.57
SSSCA1-206ENST00000531405 PIGNO95427 931 aa18.63■□□□□ 0.57
SSSCA1-206ENST00000531405 IGSF6O95976 241 aa18.63■□□□□ 0.57
SSSCA1-206ENST00000531405 KRT3P12035 628 aa18.63■□□□□ 0.57
SSSCA1-206ENST00000531405 UNGP13051 313 aaPredicted RBP18.63■□□□□ 0.57
SSSCA1-206ENST00000531405 EPHB2P29323 1055 aa18.63■□□□□ 0.57
SSSCA1-206ENST00000531405 YPEL5P62699 121 aa18.63■□□□□ 0.57
SSSCA1-206ENST00000531405 SKOR1P84550 965 aa18.63■□□□□ 0.57
SSSCA1-206ENST00000531405 PPARDQ03181 441 aa18.63■□□□□ 0.57
SSSCA1-206ENST00000531405 VAC14Q08AM6 782 aa18.63■□□□□ 0.57
SSSCA1-206ENST00000531405 LY6DQ14210 128 aa18.63■□□□□ 0.57
SSSCA1-206ENST00000531405 RTL3Q8N8U3 475 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms