RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 TADA1Q96BN2 335 aa19.24■□□□□ 0.67
SMPD1-205ENST00000531303 TBL1YQ9BQ87 522 aa19.24■□□□□ 0.67
SMPD1-205ENST00000531303 ATP13A3Q9H7F0 1226 aa19.24■□□□□ 0.67
SMPD1-205ENST00000531303 LMAN1LQ9HAT1 526 aa19.24■□□□□ 0.67
SMPD1-205ENST00000531303 EIF2B3Q9NR50 452 aaKnown RBP19.24■□□□□ 0.67
SMPD1-205ENST00000531303 VPS45Q9NRW7 570 aa19.24■□□□□ 0.67
SMPD1-205ENST00000531303 SHOC2Q9UQ13 582 aa19.24■□□□□ 0.67
SMPD1-205ENST00000531303 KANSL1LA0AUZ9 987 aa19.23■□□□□ 0.67
SMPD1-205ENST00000531303 FAM170BA6NMN3 283 aa19.23■□□□□ 0.67
SMPD1-205ENST00000531303 ERI2A8K979 691 aaKnown RBP19.23■□□□□ 0.67
SMPD1-205ENST00000531303 NPC1O15118 1278 aa19.23■□□□□ 0.67
SMPD1-205ENST00000531303 SYNCRIPO60506 623 aaKnown RBP19.23■□□□□ 0.67
SMPD1-205ENST00000531303 ADAM23O75077 832 aa19.23■□□□□ 0.67
SMPD1-205ENST00000531303 UGT2B4P06133 528 aa19.23■□□□□ 0.67
SMPD1-205ENST00000531303 MAGEA6P43360 314 aa19.23■□□□□ 0.67
SMPD1-205ENST00000531303 CHRNA4P43681 627 aa19.23■□□□□ 0.67
SMPD1-205ENST00000531303 TNNT3P45378 269 aaPredicted RBP19.23■□□□□ 0.67
SMPD1-205ENST00000531303 STARD6P59095 220 aa19.23■□□□□ 0.67
SMPD1-205ENST00000531303 MRPS21P82921 87 aaKnown RBP19.23■□□□□ 0.67
SMPD1-205ENST00000531303 GALNT3Q14435 633 aa19.23■□□□□ 0.67
SMPD1-205ENST00000531303 FBXO43Q4G163 708 aa19.23■□□□□ 0.67
SMPD1-205ENST00000531303 RALGPS1Q5JS13 557 aa19.23■□□□□ 0.67
SMPD1-205ENST00000531303 Q6ZS52 159 aa19.23■□□□□ 0.67
SMPD1-205ENST00000531303 HOOK3Q86VS8 718 aa19.23■□□□□ 0.67
SMPD1-205ENST00000531303 PLPP6Q8IY26 295 aa19.23■□□□□ 0.67
SMPD1-205ENST00000531303 OR52K1Q8NGK4 314 aa19.23■□□□□ 0.67
SMPD1-205ENST00000531303 TBC1D17Q9HA65 648 aa19.23■□□□□ 0.67
SMPD1-205ENST00000531303 LTB4R2Q9NPC1 389 aa19.23■□□□□ 0.67
SMPD1-205ENST00000531303 PRSS16Q9NQE7 514 aa19.23■□□□□ 0.67
SMPD1-205ENST00000531303 ZDHHC18Q9NUE0 388 aa19.23■□□□□ 0.67
SMPD1-205ENST00000531303 POLR3BQ9NW08 1133 aaPredicted RBP19.23■□□□□ 0.67
SMPD1-205ENST00000531303 IL36AQ9UHA7 158 aa19.23■□□□□ 0.67
SMPD1-205ENST00000531303 NCOR1O75376 2440 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.22■□□□□ 0.67
SMPD1-205ENST00000531303 NDC80O14777 642 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 AVILO75366 819 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 LEFTY1O75610 366 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 CTSLP07711 333 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 MYBL2P10244 700 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 CHRNB1P11230 501 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 SERPINA4P29622 427 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 ZXDAP98168 799 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 CAV1Q03135 178 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 CDK18Q07002 472 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 ENPP2Q13822 863 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 CCNI2Q6ZMN8 369 aaPredicted RBP19.22■□□□□ 0.67
SMPD1-205ENST00000531303 CCDC25Q86WR0 208 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 CACUL1Q86Y37 369 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 DNAAF3Q8N9W5 541 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 KCNV2Q8TDN2 545 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 OR8D1Q8WZ84 308 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 TDRD1Q9BXT4 1180 aaKnown RBP19.22■□□□□ 0.67
SMPD1-205ENST00000531303 PCDHB9Q9Y5E1 797 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 WASF2Q9Y6W5 498 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 CKAP5Q14008 2032 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 SUN1O94901 812 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 PDHA1P08559 390 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 HOXB2P14652 356 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 TPH1P17752 444 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 ECHS1P30084 290 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 ADRA1AP35348 466 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 SESN2P58004 480 aaPredicted RBP19.22■□□□□ 0.67
SMPD1-205ENST00000531303 SARNPP82979 210 aaKnown RBP19.22■□□□□ 0.67
SMPD1-205ENST00000531303 CDK16Q00536 496 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 HP1BP3Q5SSJ5 553 aaPredicted RBP19.22■□□□□ 0.67
SMPD1-205ENST00000531303 FNBP1LQ5T0N5 605 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 DENND2CQ68D51 928 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 NAPEPLDQ6IQ20 393 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 KIAA1211LQ6NV74 962 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 PKN3Q6P5Z2 889 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 GDPD4Q6W3E5 623 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 TRMT11Q7Z4G4 463 aaKnown RBP19.22■□□□□ 0.67
SMPD1-205ENST00000531303 KLHDC8BQ8IXV7 354 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 MCUQ8NE86 351 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 LPCAT1Q8NF37 534 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 FEM1CQ96JP0 617 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 KLHL32Q96NJ5 620 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 TUBGCP5Q96RT8 1024 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 UHRF1Q96T88 793 aaPredicted RBP19.22■□□□□ 0.67
SMPD1-205ENST00000531303 FAM129BQ96TA1 746 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 CPEB1Q9BZB8 566 aaKnown RBP19.22■□□□□ 0.67
SMPD1-205ENST00000531303 SUV39H2Q9H5I1 410 aa19.22■□□□□ 0.67
SMPD1-205ENST00000531303 MTRF1LQ9UGC7 380 aaKnown RBP19.22■□□□□ 0.67
SMPD1-205ENST00000531303 TRIOO75962 3097 aa19.21■□□□□ 0.67
SMPD1-205ENST00000531303 UQCRHLA0A096LP55 91 aa19.21■□□□□ 0.67
SMPD1-205ENST00000531303 BANF1O75531 89 aa19.21■□□□□ 0.67
SMPD1-205ENST00000531303 IL1BP01584 269 aa19.21■□□□□ 0.67
SMPD1-205ENST00000531303 UQCRHP07919 91 aa19.21■□□□□ 0.67
SMPD1-205ENST00000531303 COL9A1P20849 921 aa19.21■□□□□ 0.67
SMPD1-205ENST00000531303 CA4P22748 312 aa19.21■□□□□ 0.67
SMPD1-205ENST00000531303 LRRC32Q14392 662 aa19.21■□□□□ 0.67
SMPD1-205ENST00000531303 ELAVL3Q14576 367 aaKnown RBP19.21■□□□□ 0.67
SMPD1-205ENST00000531303 STARD3Q14849 445 aa19.21■□□□□ 0.67
SMPD1-205ENST00000531303 SIRPB2Q5JXA9 342 aa19.21■□□□□ 0.67
SMPD1-205ENST00000531303 CFAP58Q5T655 872 aa19.21■□□□□ 0.67
SMPD1-205ENST00000531303 ARMC12Q5T9G4 340 aa19.21■□□□□ 0.67
SMPD1-205ENST00000531303 WDR93Q6P2C0 686 aa19.21■□□□□ 0.67
SMPD1-205ENST00000531303 RANBP10Q6VN20 620 aa19.21■□□□□ 0.67
SMPD1-205ENST00000531303 ZNF534Q76KX8 674 aa19.21■□□□□ 0.67
SMPD1-205ENST00000531303 LINC00523Q86TU6 105 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms