RNA–Protein interactions for RNA: ENST00000530384.5

CCS-205, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,196 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-205ENST00000530384 PSKH2Q96QS6 385 aa17.27■□□□□ 0.36
CCS-205ENST00000530384 SUV39H2Q9H5I1 410 aa17.27■□□□□ 0.36
CCS-205ENST00000530384 ATP13A3Q9H7F0 1226 aa17.27■□□□□ 0.36
CCS-205ENST00000530384 GDF3Q9NR23 364 aa17.27■□□□□ 0.36
CCS-205ENST00000530384 TSPAN11A1L157 253 aa17.26■□□□□ 0.35
CCS-205ENST00000530384 H0Y8X5 98 aa17.26■□□□□ 0.35
CCS-205ENST00000530384 AREL1O15033 823 aa17.26■□□□□ 0.35
CCS-205ENST00000530384 MAFKO60675 156 aa17.26■□□□□ 0.35
CCS-205ENST00000530384 PIGNO95427 931 aa17.26■□□□□ 0.35
CCS-205ENST00000530384 PRLRP16471 622 aa17.26■□□□□ 0.35
CCS-205ENST00000530384 FECHP22830 423 aa17.26■□□□□ 0.35
CCS-205ENST00000530384 XPAP23025 273 aaPredicted RBP17.26■□□□□ 0.35
CCS-205ENST00000530384 KDELR1P24390 212 aa17.26■□□□□ 0.35
CCS-205ENST00000530384 SERPINA4P29622 427 aa17.26■□□□□ 0.35
CCS-205ENST00000530384 HADHBP55084 474 aaKnown RBP17.26■□□□□ 0.35
CCS-205ENST00000530384 NXPH1P58417 271 aa17.26■□□□□ 0.35
CCS-205ENST00000530384 AP1S1P61966 158 aa17.26■□□□□ 0.35
CCS-205ENST00000530384 PAFAH1B3Q15102 231 aaKnown RBP17.26■□□□□ 0.35
CCS-205ENST00000530384 CFAP58Q5T655 872 aa17.26■□□□□ 0.35
CCS-205ENST00000530384 LRRC38Q5VT99 294 aa17.26■□□□□ 0.35
CCS-205ENST00000530384 NCBP2-AS2Q69YL0 99 aa17.26■□□□□ 0.35
CCS-205ENST00000530384 BRAT1Q6PJG6 821 aa17.26■□□□□ 0.35
CCS-205ENST00000530384 VSIG1Q86XK7 387 aa17.26■□□□□ 0.35
CCS-205ENST00000530384 NAXDQ8IW45 347 aa17.26■□□□□ 0.35
CCS-205ENST00000530384 OXR1Q8N573 874 aa17.26■□□□□ 0.35
CCS-205ENST00000530384 PCDH19Q8TAB3 1148 aa17.26■□□□□ 0.35
CCS-205ENST00000530384 FAM174AQ8TBP5 190 aa17.26■□□□□ 0.35
CCS-205ENST00000530384 KLK6Q92876 244 aa17.26■□□□□ 0.35
CCS-205ENST00000530384 ELF4Q99607 663 aaPredicted RBP17.26■□□□□ 0.35
CCS-205ENST00000530384 SLC17A9Q9BYT1 436 aa17.26■□□□□ 0.35
CCS-205ENST00000530384 KLHL11Q9NVR0 708 aa17.26■□□□□ 0.35
CCS-205ENST00000530384 PCDHA13Q9Y5I0 950 aa17.26■□□□□ 0.35
CCS-205ENST00000530384 LAMA1P25391 3075 aa17.25■□□□□ 0.35
CCS-205ENST00000530384 LRRD1A4D1F6 860 aa17.25■□□□□ 0.35
CCS-205ENST00000530384 ZNF487B1APH4 448 aa17.25■□□□□ 0.35
CCS-205ENST00000530384 GIPC1O14908 333 aa17.25■□□□□ 0.35
CCS-205ENST00000530384 YKT6O15498 198 aa17.25■□□□□ 0.35
CCS-205ENST00000530384 FLRT2O43155 660 aa17.25■□□□□ 0.35
CCS-205ENST00000530384 MFSD11O43934 449 aa17.25■□□□□ 0.35
CCS-205ENST00000530384 SH3BP5O60239 455 aa17.25■□□□□ 0.35
CCS-205ENST00000530384 PCDHGA12O60330 932 aa17.25■□□□□ 0.35
CCS-205ENST00000530384 IPO7O95373 1038 aaKnown RBP17.25■□□□□ 0.35
CCS-205ENST00000530384 TIMP2P16035 220 aa17.25■□□□□ 0.35
CCS-205ENST00000530384 NOP2P46087 812 aaKnown RBP17.25■□□□□ 0.35
CCS-205ENST00000530384 RGRP47804 291 aa17.25■□□□□ 0.35
CCS-205ENST00000530384 SLC10A7Q0GE19 358 aa17.25■□□□□ 0.35
CCS-205ENST00000530384 ELP6Q0PNE2 266 aa17.25■□□□□ 0.35
CCS-205ENST00000530384 SGCGQ13326 291 aa17.25■□□□□ 0.35
CCS-205ENST00000530384 N4BP2L1Q5TBK1 243 aaPredicted RBP17.25■□□□□ 0.35
CCS-205ENST00000530384 DBX2Q6ZNG2 339 aa17.25■□□□□ 0.35
CCS-205ENST00000530384 ASB12Q8WXK4 309 aa17.25■□□□□ 0.35
CCS-205ENST00000530384 KLHDC7BQ96G42 594 aa17.25■□□□□ 0.35
CCS-205ENST00000530384 C1QTNF2Q9BXJ5 285 aa17.25■□□□□ 0.35
CCS-205ENST00000530384 ERVMER34-1Q9H9K5 563 aa17.25■□□□□ 0.35
CCS-205ENST00000530384 PCDHB9Q9Y5E1 797 aa17.25■□□□□ 0.35
CCS-205ENST00000530384 A0A0A6YYK5 440 aaPredicted RBP17.24■□□□□ 0.35
CCS-205ENST00000530384 A0A1B0GTQ1 180 aa17.24■□□□□ 0.35
CCS-205ENST00000530384 KCNK3O14649 394 aa17.24■□□□□ 0.35
CCS-205ENST00000530384 SPINT1O43278 529 aa17.24■□□□□ 0.35
CCS-205ENST00000530384 SPOPO43791 374 aa17.24■□□□□ 0.35
CCS-205ENST00000530384 BUB1BO60566 1050 aaPredicted RBP17.24■□□□□ 0.35
CCS-205ENST00000530384 NDUFA10O95299 355 aa17.24■□□□□ 0.35
CCS-205ENST00000530384 PEX11BO96011 259 aa17.24■□□□□ 0.35
CCS-205ENST00000530384 CDC25BP30305 580 aa17.24■□□□□ 0.35
CCS-205ENST00000530384 GARSP41250 739 aaKnown RBP17.24■□□□□ 0.35
CCS-205ENST00000530384 ARRB1P49407 418 aaPredicted RBP17.24■□□□□ 0.35
CCS-205ENST00000530384 SCNN1BP51168 640 aa17.24■□□□□ 0.35
CCS-205ENST00000530384 BCL2L1Q07817 233 aa17.24■□□□□ 0.35
CCS-205ENST00000530384 GALNT2Q10471 571 aa17.24■□□□□ 0.35
CCS-205ENST00000530384 UGP2Q16851 508 aa17.24■□□□□ 0.35
CCS-205ENST00000530384 ODF2Q5BJF6 829 aa17.24■□□□□ 0.35
CCS-205ENST00000530384 MARC1Q5VT66 337 aa17.24■□□□□ 0.35
CCS-205ENST00000530384 TIGD7Q6NT04 549 aaPredicted RBP17.24■□□□□ 0.35
CCS-205ENST00000530384 CAMK1DQ8IU85 385 aa17.24■□□□□ 0.35
CCS-205ENST00000530384 RHOT1Q8IXI2 618 aa17.24■□□□□ 0.35
CCS-205ENST00000530384 CXorf40AQ8TE69 158 aa17.24■□□□□ 0.35
CCS-205ENST00000530384 SETD7Q8WTS6 366 aaKnown RBP17.24■□□□□ 0.35
CCS-205ENST00000530384 RAPGEF5Q92565 580 aa17.24■□□□□ 0.35
CCS-205ENST00000530384 MYOCQ99972 504 aa17.24■□□□□ 0.35
CCS-205ENST00000530384 FZD3Q9NPG1 666 aa17.24■□□□□ 0.35
CCS-205ENST00000530384 DDX56Q9NY93 547 aaKnown RBP17.24■□□□□ 0.35
CCS-205ENST00000530384 IMPACTQ9P2X3 320 aa17.24■□□□□ 0.35
CCS-205ENST00000530384 GGT7Q9UJ14 662 aa17.24■□□□□ 0.35
CCS-205ENST00000530384 ITM2BQ9Y287 266 aa17.24■□□□□ 0.35
CCS-205ENST00000530384 CA5BQ9Y2D0 317 aa17.24■□□□□ 0.35
CCS-205ENST00000530384 HS3ST3A1Q9Y663 406 aa17.24■□□□□ 0.35
CCS-205ENST00000530384 EPN1Q9Y6I3 576 aaPredicted RBP17.24■□□□□ 0.35
CCS-205ENST00000530384 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.23■□□□□ 0.35
CCS-205ENST00000530384 IGLON5A6NGN9 336 aa17.23■□□□□ 0.35
CCS-205ENST00000530384 SOWAHDA6NJG2 315 aa17.23■□□□□ 0.35
CCS-205ENST00000530384 A6NNZ2 444 aa17.23■□□□□ 0.35
CCS-205ENST00000530384 MUSKO15146 869 aa17.23■□□□□ 0.35
CCS-205ENST00000530384 PAK4O96013 591 aaPredicted RBP17.23■□□□□ 0.35
CCS-205ENST00000530384 THEGLP0DJG4 465 aa17.23■□□□□ 0.35
CCS-205ENST00000530384 MX2P20592 715 aa17.23■□□□□ 0.35
CCS-205ENST00000530384 COMTP21964 271 aa17.23■□□□□ 0.35
CCS-205ENST00000530384 MMP13P45452 471 aa17.23■□□□□ 0.35
CCS-205ENST00000530384 FGL2Q14314 439 aa17.23■□□□□ 0.35
CCS-205ENST00000530384 IFI16Q16666 785 aaKnown RBP17.23■□□□□ 0.35
CCS-205ENST00000530384 INAVAQ3KP66 663 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms