RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 LRRC57Q8N9N7 239 aa12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 CCDC112Q8NEF3 446 aa12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 KRT35Q92764 455 aa12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 FEM1CQ96JP0 617 aa12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 ZDHHC5Q9C0B5 715 aa12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 TMEM9BQ9NQ34 198 aa12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 DLL3Q9NYJ7 618 aa12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 CDV3Q9UKY7 258 aaKnown RBP12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 ZFR2Q9UPR6 939 aaKnown RBP12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 DMTF1Q9Y222 760 aa12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 ADGRG1Q9Y653 693 aa12.82□□□□□ -0.36
CCDC90B-216ENST00000529856 PLXNA2O75051 1894 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 CACNA1EQ15878 2313 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 TSPAN11A1L157 253 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 GRID2IPA4D2P6 1211 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 C4orf47A7E2U8 309 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 AREL1O15033 823 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 ARHGAP6O43182 974 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 TSPAN6O43657 245 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 CR2P20023 1033 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 MAT2AP31153 395 aaKnown RBP12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 CTNNA1P35221 906 aaKnown RBP12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 ABL2P42684 1182 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 MMP13P45452 471 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 MAPK8P45983 427 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 ID4P47928 161 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 GRIA4P48058 902 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 MARCKSL1P49006 195 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 SUOXP51687 545 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 AP1S1P61966 158 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 BNC1Q01954 994 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 TFDP2Q14188 446 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 TEAD4Q15561 434 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 ZNF284Q2VY69 593 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 SETMARQ53H47 684 aaPredicted RBP12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 EXD1Q8NHP7 514 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 LRRN4Q8WUT4 740 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 MAML1Q92585 1016 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 HDAC11Q96DB2 347 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 SERAC1Q96JX3 654 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 NSMCE3Q96MG7 304 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 SLC6A18Q96N87 628 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 ZNF830Q96NB3 372 aaPredicted RBP12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 NUDCD1Q96RS6 583 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 MGME1Q9BQP7 344 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 RTKNQ9BST9 563 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 ATP13A3Q9H7F0 1226 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 TRIM10Q9UDY6 481 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 PCDHA3Q9Y5H8 950 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 HEY1Q9Y5J3 304 aa12.81□□□□□ -0.36
CCDC90B-216ENST00000529856 CEP250Q9BV73 2442 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 TRPM6Q9BX84 2022 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 A0A1B0GVT2 93 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 A0A1W2PR77 199 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 MACROD2A1Z1Q3 448 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 TTC24A2A3L6 582 aaPredicted RBP12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 TM4SF5O14894 197 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 WNT9AO14904 365 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 VILLO15195 856 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 SPINT1O43278 529 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 GJB3O75712 270 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 KRT10P13645 584 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 CCNB1P14635 433 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 ITIH2P19823 946 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 CTNNA2P26232 953 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 SERPINA4P29622 427 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 PEX5P50542 639 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 ATXN3P54252 364 aaPredicted RBP12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 RPS21P63220 83 aaKnown RBP12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 BCL2L1Q07817 233 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 PPIDQ08752 370 aaKnown RBP12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 GRIK2Q13002 908 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 PUM1Q14671 1186 aaKnown RBP eCLIP12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 PDK1Q15118 436 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 UGP2Q16851 508 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 TMEM259Q4ZIN3 620 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 TFDP3Q5H9I0 405 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 RALGPS1Q5JS13 557 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 SEL1L3Q68CR1 1132 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 NAPEPLDQ6IQ20 393 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 KIAA1161Q6NSJ0 714 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 BRAT1Q6PJG6 821 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 NPNTQ6UXI9 565 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 NT5DC3Q86UY8 548 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 ZSCAN30Q86W11 494 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 CCDC13Q8IYE1 715 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 RNF10Q8N5U6 811 aaKnown RBP12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 CCNYQ8ND76 341 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 KLK6Q92876 244 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 ECHDC3Q96DC8 303 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 RBM41Q96IZ5 413 aaKnown RBP12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 LGMNQ99538 433 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 GTPBP2Q9BX10 602 aaKnown RBP12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 SLC17A9Q9BYT1 436 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 NOD2Q9HC29 1040 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 NT5MQ9NPB1 228 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 SCUBE2Q9NQ36 999 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms