RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 FAM131BQ86XD5 332 aa7.22□□□□□ -1.25
ITGB1-218ENST00000528877 MMAAQ8IVH4 418 aaKnown RBP7.22□□□□□ -1.25
ITGB1-218ENST00000528877 STK40Q8N2I9 435 aa7.22□□□□□ -1.25
ITGB1-218ENST00000528877 HDDC3Q8N4P3 179 aa7.22□□□□□ -1.25
ITGB1-218ENST00000528877 EMC1Q8N766 993 aa7.22□□□□□ -1.25
ITGB1-218ENST00000528877 JOSD2Q8TAC2 188 aa7.22□□□□□ -1.25
ITGB1-218ENST00000528877 SLC30A5Q8TAD4 765 aa7.22□□□□□ -1.25
ITGB1-218ENST00000528877 OR8D1Q8WZ84 308 aa7.22□□□□□ -1.25
ITGB1-218ENST00000528877 RPL10LQ96L21 214 aaKnown RBP7.22□□□□□ -1.25
ITGB1-218ENST00000528877 AGPAT1Q99943 283 aa7.22□□□□□ -1.25
ITGB1-218ENST00000528877 C11orf70Q9BRQ4 267 aa7.22□□□□□ -1.25
ITGB1-218ENST00000528877 GTPBP2Q9BX10 602 aaKnown RBP7.22□□□□□ -1.25
ITGB1-218ENST00000528877 ZYG11BQ9C0D3 744 aa7.22□□□□□ -1.25
ITGB1-218ENST00000528877 CEP44Q9C0F1 390 aa7.22□□□□□ -1.25
ITGB1-218ENST00000528877 OSBPL2Q9H1P3 480 aa7.22□□□□□ -1.25
ITGB1-218ENST00000528877 SLC32A1Q9H598 525 aa7.22□□□□□ -1.25
ITGB1-218ENST00000528877 TM9SF3Q9HD45 589 aa7.22□□□□□ -1.25
ITGB1-218ENST00000528877 FSCN3Q9NQT6 498 aa7.22□□□□□ -1.25
ITGB1-218ENST00000528877 FBXL12Q9NXK8 326 aa7.22□□□□□ -1.25
ITGB1-218ENST00000528877 ADAM22Q9P0K1 906 aa7.22□□□□□ -1.25
ITGB1-218ENST00000528877 EIF2B4Q9UI10 523 aaKnown RBP7.22□□□□□ -1.25
ITGB1-218ENST00000528877 ANGPTL2Q9UKU9 493 aa7.22□□□□□ -1.25
ITGB1-218ENST00000528877 PPM1HQ9ULR3 514 aa7.22□□□□□ -1.25
ITGB1-218ENST00000528877 NCKAP1Q9Y2A7 1128 aa7.22□□□□□ -1.25
ITGB1-218ENST00000528877 HIF3AQ9Y2N7 669 aa7.22□□□□□ -1.25
ITGB1-218ENST00000528877 SLCO1B1Q9Y6L6 691 aa7.22□□□□□ -1.25
ITGB1-218ENST00000528877 COL5A1P20908 1838 aaPredicted RBP7.22□□□□□ -1.25
ITGB1-218ENST00000528877 NUMA1Q14980 2115 aa7.21□□□□□ -1.25
ITGB1-218ENST00000528877 SIGLEC16A6NMB1 481 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 SMTNL1A8MU46 457 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 C1QTNF3-AMACRE9PGA6 284 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 GIPC1O14908 333 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 VILLO15195 856 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 PCDHGA12O60330 932 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 ZNF821O75541 412 aaPredicted RBP7.21□□□□□ -1.26
ITGB1-218ENST00000528877 ZMPSTE24O75844 475 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 TRIM16O95361 564 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 KRT3P12035 628 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 CDK11BP21127 795 aaKnown RBP7.21□□□□□ -1.26
ITGB1-218ENST00000528877 SLC8A1P32418 973 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 HTR7P34969 479 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 RFC1P35251 1148 aaPredicted RBP7.21□□□□□ -1.26
ITGB1-218ENST00000528877 PRKCIP41743 596 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 CTSKP43235 329 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 ZNF165P49910 485 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 SERPINH1P50454 418 aaKnown RBP7.21□□□□□ -1.26
ITGB1-218ENST00000528877 ZNF143P52747 638 aaPredicted RBP7.21□□□□□ -1.26
ITGB1-218ENST00000528877 GALCP54803 685 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 GEMIN4P57678 1058 aaKnown RBP7.21□□□□□ -1.26
ITGB1-218ENST00000528877 RACK1P63244 317 aaKnown RBP7.21□□□□□ -1.26
ITGB1-218ENST00000528877 IQCB1Q15051 598 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 DLG2Q15700 870 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 ZNF423Q2M1K9 1284 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 C15orf59Q2T9L4 293 aaPredicted RBP7.21□□□□□ -1.26
ITGB1-218ENST00000528877 ARL13BQ3SXY8 428 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 FAM46CQ5VWP2 391 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 CAVIN1Q6NZI2 390 aaKnown RBP7.21□□□□□ -1.26
ITGB1-218ENST00000528877 DNAJC24Q6P3W2 148 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 C22orf39Q6P5X5 142 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 NCEH1Q6PIU2 408 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 IRF2BP2Q7Z5L9 587 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 TFAP2DQ7Z6R9 452 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 NAXDQ8IW45 347 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 DEFB124Q8NES8 71 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 TMIEQ8NEW7 156 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 OR2A12Q8NGT7 310 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 UBASH3BQ8TF42 649 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 FAM172AQ8WUF8 416 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 RXFP2Q8WXD0 754 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 UTP4Q969X6 686 aaKnown RBP7.21□□□□□ -1.26
ITGB1-218ENST00000528877 ISG20Q96AZ6 181 aaKnown RBP7.21□□□□□ -1.26
ITGB1-218ENST00000528877 FAM46AQ96IP4 442 aaKnown RBP7.21□□□□□ -1.26
ITGB1-218ENST00000528877 VCPIP1Q96JH7 1222 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 CCDC114Q96M63 670 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 TCF12Q99081 682 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 OMDQ99983 421 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 ACE2Q9BYF1 805 aaPredicted RBP7.21□□□□□ -1.26
ITGB1-218ENST00000528877 EDEM3Q9BZQ6 932 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 SIK2Q9H0K1 926 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 PREBQ9HCU5 417 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 TMEM248Q9NWD8 314 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 AIPL1Q9NZN9 384 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 MPP6Q9NZW5 540 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 OR12D3Q9UGF7 316 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 RAXQ9Y2V3 346 aa7.21□□□□□ -1.26
ITGB1-218ENST00000528877 ANKRD11Q6UB99 2663 aaPredicted RBP7.21□□□□□ -1.26
ITGB1-218ENST00000528877 DSPP15924 2871 aaKnown RBP7.2□□□□□ -1.26
ITGB1-218ENST00000528877 PLXNA2O75051 1894 aa7.2□□□□□ -1.26
ITGB1-218ENST00000528877 A0A0D9SEW6 157 aa7.2□□□□□ -1.26
ITGB1-218ENST00000528877 A0A1B0GVT2 93 aa7.2□□□□□ -1.26
ITGB1-218ENST00000528877 A0A1W2PQJ5 194 aa7.2□□□□□ -1.26
ITGB1-218ENST00000528877 A0A1W2PR77 199 aa7.2□□□□□ -1.26
ITGB1-218ENST00000528877 FAM221BA6H8Z2 402 aa7.2□□□□□ -1.26
ITGB1-218ENST00000528877 LRRC53A6NM62 1247 aa7.2□□□□□ -1.26
ITGB1-218ENST00000528877 WASH4PA8MWX3 477 aa7.2□□□□□ -1.26
ITGB1-218ENST00000528877 EIF3CLB5ME19 914 aaKnown RBP7.2□□□□□ -1.26
ITGB1-218ENST00000528877 YKT6O15498 198 aa7.2□□□□□ -1.26
ITGB1-218ENST00000528877 DDX3YO15523 660 aaKnown RBP7.2□□□□□ -1.26
ITGB1-218ENST00000528877 FLRT2O43155 660 aa7.2□□□□□ -1.26
ITGB1-218ENST00000528877 TEX33O43247 280 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms