RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 ALFQ53S48 1182 aa15.49■□□□□ 0.07
USH1C-207ENST00000527720 ACAD11Q709F0 780 aa15.49■□□□□ 0.07
USH1C-207ENST00000527720 PIWIL4Q7Z3Z4 852 aaKnown RBP15.49■□□□□ 0.07
USH1C-207ENST00000527720 SETD3Q86TU7 594 aaPredicted RBP15.49■□□□□ 0.07
USH1C-207ENST00000527720 PHTF2Q8N3S3 785 aa15.49■□□□□ 0.07
USH1C-207ENST00000527720 GPATCH11Q8N954 259 aa15.49■□□□□ 0.07
USH1C-207ENST00000527720 SLC43A3Q8NBI5 491 aa15.49■□□□□ 0.07
USH1C-207ENST00000527720 CCDC126Q96EE4 140 aa15.49■□□□□ 0.07
USH1C-207ENST00000527720 ATXN3LQ9H3M9 355 aa15.49■□□□□ 0.07
USH1C-207ENST00000527720 MARCH2Q9P0N8 246 aa15.49■□□□□ 0.07
USH1C-207ENST00000527720 ABT1Q9ULW3 272 aaKnown RBP15.49■□□□□ 0.07
USH1C-207ENST00000527720 E9PBE3 544 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 SLC7A4O43246 635 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 KLHL41O60662 606 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 CNTN5O94779 1100 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 MMP2P08253 660 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 HAPLN1P10915 354 aaPredicted RBP15.48■□□□□ 0.07
USH1C-207ENST00000527720 FGFR3P22607 806 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 CD86P42081 329 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 MAPKAPK2P49137 400 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 KPNA1P52294 538 aaPredicted RBP15.48■□□□□ 0.07
USH1C-207ENST00000527720 SP3Q02447 781 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 ITKQ08881 620 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 DLG1Q12959 904 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 BLMHQ13867 455 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 FAM83EQ2M2I3 478 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 FBXL22Q6P050 247 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 FAM43BQ6ZT52 329 aaPredicted RBP15.48■□□□□ 0.07
USH1C-207ENST00000527720 ADGRG6Q86SQ4 1221 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 CPSF7Q8N684 471 aaKnown RBP15.48■□□□□ 0.07
USH1C-207ENST00000527720 DTX3LQ8TDB6 740 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 SCG3Q8WXD2 468 aaKnown RBP15.48■□□□□ 0.07
USH1C-207ENST00000527720 JADE3Q92613 823 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 OR52B2Q96RD2 323 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 OMDQ99983 421 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 MAN1C1Q9NR34 630 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 NCKIPSDQ9NZQ3 722 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 MROH6A6NGR9 719 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 GRID2O43424 1007 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 THRAP10827 490 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 ANPEPP15144 967 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 ATP5F1P24539 256 aaPredicted RBP15.48■□□□□ 0.07
USH1C-207ENST00000527720 LAMB3Q13751 1172 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 BTG3Q14201 252 aaPredicted RBP15.48■□□□□ 0.07
USH1C-207ENST00000527720 AGAP9Q5VTM2 703 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 FAM171A1Q5VUB5 890 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 KDELC2Q7Z4H8 507 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 LSMEM2Q8N112 164 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 SLC25A41Q8N5S1 370 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 ATAD1Q8NBU5 361 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 PEX13Q92968 403 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 PABPC5Q96DU9 382 aaKnown RBP15.48■□□□□ 0.07
USH1C-207ENST00000527720 MFSD1Q9H3U5 465 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 CDH22Q9UJ99 828 aa15.48■□□□□ 0.07
USH1C-207ENST00000527720 MAP3K7O43318 606 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 RAMP2O60895 175 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 ITGAXP20702 1163 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 PBX3P40426 434 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 CAP1Q01518 475 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 GPR17Q13304 367 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 ZNF460Q14592 562 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 POLD3Q15054 466 aaPredicted RBP15.47■□□□□ 0.07
USH1C-207ENST00000527720 FRMD7Q6ZUT3 714 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 ABI1Q8IZP0 508 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 C2orf15Q8WU43 125 aaKnown RBP15.47■□□□□ 0.07
USH1C-207ENST00000527720 HEXDCQ8WVB3 486 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 IGSF8Q969P0 613 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 PSMG2Q969U7 264 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 RETREG1Q9H6L5 497 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 ZDHHC2Q9UIJ5 367 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 CDYLQ9Y232 598 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 SSX2IPQ9Y2D8 614 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 LRCH1Q9Y2L9 728 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 LOC285095A0A1B0GVY8 99 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 HOXD10P28358 340 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 DSC2Q02487 901 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 TAF10Q12962 218 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 SERINC3Q13530 473 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 CUL3Q13618 768 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 LSM12Q3MHD2 195 aaKnown RBP15.47■□□□□ 0.07
USH1C-207ENST00000527720 RALGPS1Q5JS13 557 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 C10orf120Q5SQS8 335 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 RAP1GAP2Q684P5 730 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 TRIM68Q6AZZ1 485 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 KLC3Q6P597 504 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 CNSTQ6PJW8 725 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 OR13J1Q8NGT2 312 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 ARRDC2Q8TBH0 407 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 AGR3Q8TD06 166 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 KLHL5Q96PQ7 755 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 IGSF5Q9NSI5 407 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 MRGBPQ9NV56 204 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 SRRDQ9UH36 339 aa15.47■□□□□ 0.07
USH1C-207ENST00000527720 MTMR11A4FU01 709 aa15.46■□□□□ 0.07
USH1C-207ENST00000527720 RGSL1A5PLK6 1076 aa15.46■□□□□ 0.07
USH1C-207ENST00000527720 TRPC5OSA6NMA1 111 aa15.46■□□□□ 0.07
USH1C-207ENST00000527720 RBP1P09455 135 aa15.46■□□□□ 0.07
USH1C-207ENST00000527720 PPARGP37231 505 aaPredicted RBP15.46■□□□□ 0.07
USH1C-207ENST00000527720 SLC26A3P40879 764 aa15.46■□□□□ 0.07
USH1C-207ENST00000527720 MAXP61244 160 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms