RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 RASA4O43374 803 aa22.66■■□□□ 1.22
TRAPPC4-208ENST00000527680 CCDC172P0C7W6 258 aa22.66■■□□□ 1.22
TRAPPC4-208ENST00000527680 ITIH2P19823 946 aa22.66■■□□□ 1.22
TRAPPC4-208ENST00000527680 RPL7AP62424 266 aaKnown RBP22.66■■□□□ 1.22
TRAPPC4-208ENST00000527680 MYL5Q02045 173 aa22.66■■□□□ 1.22
TRAPPC4-208ENST00000527680 C1QBPQ07021 282 aaKnown RBP22.66■■□□□ 1.22
TRAPPC4-208ENST00000527680 EIF2B5Q13144 721 aaKnown RBP22.66■■□□□ 1.22
TRAPPC4-208ENST00000527680 C1orf61Q13536 156 aa22.66■■□□□ 1.22
TRAPPC4-208ENST00000527680 PRRT3Q5FWE3 981 aa22.66■■□□□ 1.22
TRAPPC4-208ENST00000527680 TPRG1LQ5T0D9 272 aa22.66■■□□□ 1.22
TRAPPC4-208ENST00000527680 CDCP2Q5VXM1 449 aa22.66■■□□□ 1.22
TRAPPC4-208ENST00000527680 LSMEM2Q8N112 164 aa22.66■■□□□ 1.22
TRAPPC4-208ENST00000527680 GLMNQ92990 594 aa22.66■■□□□ 1.22
TRAPPC4-208ENST00000527680 NAF1Q96HR8 494 aaKnown RBP22.66■■□□□ 1.22
TRAPPC4-208ENST00000527680 UBL7Q96S82 380 aaPredicted RBP22.66■■□□□ 1.22
TRAPPC4-208ENST00000527680 LGMNQ99538 433 aa22.66■■□□□ 1.22
TRAPPC4-208ENST00000527680 WRAP53Q9BUR4 548 aaKnown RBP22.66■■□□□ 1.22
TRAPPC4-208ENST00000527680 SLC13A1Q9BZW2 595 aa22.66■■□□□ 1.22
TRAPPC4-208ENST00000527680 KLC2Q9H0B6 622 aa22.66■■□□□ 1.22
TRAPPC4-208ENST00000527680 NOL6Q9H6R4 1146 aaKnown RBP22.66■■□□□ 1.22
TRAPPC4-208ENST00000527680 SALL4Q9UJQ4 1053 aa22.66■■□□□ 1.22
TRAPPC4-208ENST00000527680 FZD10Q9ULW2 581 aa22.66■■□□□ 1.22
TRAPPC4-208ENST00000527680 IGSF10Q6WRI0 2623 aa22.65■■□□□ 1.22
TRAPPC4-208ENST00000527680 LY6G6EA0A0G2JKS1 128 aa22.65■■□□□ 1.22
TRAPPC4-208ENST00000527680 TIMP2P16035 220 aa22.65■■□□□ 1.22
TRAPPC4-208ENST00000527680 ADKP55263 362 aaKnown RBP22.65■■□□□ 1.22
TRAPPC4-208ENST00000527680 GABREP78334 506 aa22.65■■□□□ 1.22
TRAPPC4-208ENST00000527680 SERINC3Q13530 473 aa22.65■■□□□ 1.22
TRAPPC4-208ENST00000527680 KLHL40Q2TBA0 621 aa22.65■■□□□ 1.22
TRAPPC4-208ENST00000527680 CLEC17AQ6ZS10 378 aa22.65■■□□□ 1.22
TRAPPC4-208ENST00000527680 MON1BQ7L1V2 547 aa22.65■■□□□ 1.22
TRAPPC4-208ENST00000527680 EFL1Q7Z2Z2 1120 aaKnown RBP22.65■■□□□ 1.22
TRAPPC4-208ENST00000527680 FCRL3Q96P31 734 aaPredicted RBP22.65■■□□□ 1.22
TRAPPC4-208ENST00000527680 CNPY3Q9BT09 278 aa22.65■■□□□ 1.22
TRAPPC4-208ENST00000527680 PRORYQ9H606 182 aa22.65■■□□□ 1.22
TRAPPC4-208ENST00000527680 APOBEC3BQ9UH17 382 aaKnown RBP22.65■■□□□ 1.22
TRAPPC4-208ENST00000527680 U3KQA8 63 aa22.65■■□□□ 1.22
TRAPPC4-208ENST00000527680 TPP1O14773 563 aa22.64■■□□□ 1.21
TRAPPC4-208ENST00000527680 ANXA6P08133 673 aa22.64■■□□□ 1.21
TRAPPC4-208ENST00000527680 TNFAIP3P21580 790 aa22.64■■□□□ 1.21
TRAPPC4-208ENST00000527680 EIF4A3P38919 411 aaKnown RBP22.64■■□□□ 1.21
TRAPPC4-208ENST00000527680 RPIAP49247 311 aa22.64■■□□□ 1.21
TRAPPC4-208ENST00000527680 YPEL5P62699 121 aa22.64■■□□□ 1.21
TRAPPC4-208ENST00000527680 NR0B2Q15466 257 aa22.64■■□□□ 1.21
TRAPPC4-208ENST00000527680 PARP15Q460N3 678 aa22.64■■□□□ 1.21
TRAPPC4-208ENST00000527680 CFAP58Q5T655 872 aa22.64■■□□□ 1.21
TRAPPC4-208ENST00000527680 ACAD10Q6JQN1 1059 aa22.64■■□□□ 1.21
TRAPPC4-208ENST00000527680 GUSBP11Q6P575 273 aa22.64■■□□□ 1.21
TRAPPC4-208ENST00000527680 RBFAQ8N0V3 343 aa22.64■■□□□ 1.21
TRAPPC4-208ENST00000527680 EXOC2Q96KP1 924 aa22.64■■□□□ 1.21
TRAPPC4-208ENST00000527680 ZNF578Q96N58 590 aaPredicted RBP22.64■■□□□ 1.21
TRAPPC4-208ENST00000527680 TCEAL2Q9H3H9 227 aaPredicted RBP22.64■■□□□ 1.21
TRAPPC4-208ENST00000527680 MBNL1Q9NR56 388 aaKnown RBP22.64■■□□□ 1.21
TRAPPC4-208ENST00000527680 DONSONQ9NYP3 566 aa22.64■■□□□ 1.21
TRAPPC4-208ENST00000527680 DKK3Q9UBP4 350 aa22.64■■□□□ 1.21
TRAPPC4-208ENST00000527680 DOLKQ9UPQ8 538 aa22.64■■□□□ 1.21
TRAPPC4-208ENST00000527680 MFHAS1Q9Y4C4 1052 aa22.64■■□□□ 1.21
TRAPPC4-208ENST00000527680 MUSKO15146 869 aa22.63■■□□□ 1.21
TRAPPC4-208ENST00000527680 INSIG1O15503 277 aa22.63■■□□□ 1.21
TRAPPC4-208ENST00000527680 TGM2P21980 687 aa22.63■■□□□ 1.21
TRAPPC4-208ENST00000527680 IGFALSP35858 605 aa22.63■■□□□ 1.21
TRAPPC4-208ENST00000527680 ANP32AP39687 249 aaKnown RBP22.63■■□□□ 1.21
TRAPPC4-208ENST00000527680 AIF1P55008 147 aa22.63■■□□□ 1.21
TRAPPC4-208ENST00000527680 TPI1P60174 286 aa22.63■■□□□ 1.21
TRAPPC4-208ENST00000527680 PPARDQ03181 441 aa22.63■■□□□ 1.21
TRAPPC4-208ENST00000527680 CYTH1Q15438 398 aa22.63■■□□□ 1.21
TRAPPC4-208ENST00000527680 STX1AQ16623 288 aa22.63■■□□□ 1.21
TRAPPC4-208ENST00000527680 CRTC1Q6UUV9 634 aa22.63■■□□□ 1.21
TRAPPC4-208ENST00000527680 RBM43Q6ZSC3 357 aaKnown RBP22.63■■□□□ 1.21
TRAPPC4-208ENST00000527680 PHACTR4Q8IZ21 702 aa22.63■■□□□ 1.21
TRAPPC4-208ENST00000527680 ZNF248Q8NDW4 579 aa22.63■■□□□ 1.21
TRAPPC4-208ENST00000527680 GBP4Q96PP9 640 aa22.63■■□□□ 1.21
TRAPPC4-208ENST00000527680 ERGIC2Q96RQ1 377 aa22.63■■□□□ 1.21
TRAPPC4-208ENST00000527680 CPEB1Q9BZB8 566 aaKnown RBP22.63■■□□□ 1.21
TRAPPC4-208ENST00000527680 POLR1BQ9H9Y6 1135 aa22.63■■□□□ 1.21
TRAPPC4-208ENST00000527680 UBA2Q9UBT2 640 aaPredicted RBP22.63■■□□□ 1.21
TRAPPC4-208ENST00000527680 LOC400499M0QZD8 3231 aa22.62■■□□□ 1.21
TRAPPC4-208ENST00000527680 WASH4PA8MWX3 477 aa22.62■■□□□ 1.21
TRAPPC4-208ENST00000527680 TMCO5BA8MYB1 307 aa22.62■■□□□ 1.21
TRAPPC4-208ENST00000527680 FGF10O15520 208 aaPredicted RBP22.62■■□□□ 1.21
TRAPPC4-208ENST00000527680 GCATO75600 419 aa22.62■■□□□ 1.21
TRAPPC4-208ENST00000527680 PIGNO95427 931 aa22.62■■□□□ 1.21
TRAPPC4-208ENST00000527680 FERP16591 822 aa22.62■■□□□ 1.21
TRAPPC4-208ENST00000527680 LSSP48449 732 aa22.62■■□□□ 1.21
TRAPPC4-208ENST00000527680 PCBP4P57723 403 aaKnown RBP22.62■■□□□ 1.21
TRAPPC4-208ENST00000527680 ELP6Q0PNE2 266 aa22.62■■□□□ 1.21
TRAPPC4-208ENST00000527680 GPR155Q7Z3F1 870 aa22.62■■□□□ 1.21
TRAPPC4-208ENST00000527680 DNAAF5Q86Y56 855 aa22.62■■□□□ 1.21
TRAPPC4-208ENST00000527680 SPACA3Q8IXA5 215 aa22.62■■□□□ 1.21
TRAPPC4-208ENST00000527680 MCOLN2Q8IZK6 566 aa22.62■■□□□ 1.21
TRAPPC4-208ENST00000527680 UMODL1-AS1Q8N2C9 162 aa22.62■■□□□ 1.21
TRAPPC4-208ENST00000527680 PAF1Q8N7H5 531 aa22.62■■□□□ 1.21
TRAPPC4-208ENST00000527680 TPCN2Q8NHX9 752 aa22.62■■□□□ 1.21
TRAPPC4-208ENST00000527680 VOPP1Q96AW1 172 aa22.62■■□□□ 1.21
TRAPPC4-208ENST00000527680 SUV39H2Q9H5I1 410 aa22.62■■□□□ 1.21
TRAPPC4-208ENST00000527680 COQ6Q9Y2Z9 468 aa22.62■■□□□ 1.21
TRAPPC4-208ENST00000527680 TCRBV5S1A1TA0A578 114 aa22.61■■□□□ 1.21
TRAPPC4-208ENST00000527680 EME2A4GXA9 379 aaPredicted RBP22.61■■□□□ 1.21
TRAPPC4-208ENST00000527680 LRRC10BA6NIK2 292 aa22.61■■□□□ 1.21
TRAPPC4-208ENST00000527680 TOR1BO14657 336 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms