RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 PIAS2O75928 621 aa13.57□□□□□ -0.24
CAPN1-207ENST00000527189 ALPPL2P10696 532 aa13.57□□□□□ -0.24
CAPN1-207ENST00000527189 ABL2P42684 1182 aa13.57□□□□□ -0.24
CAPN1-207ENST00000527189 CSNK1DP48730 415 aa13.57□□□□□ -0.24
CAPN1-207ENST00000527189 CYTH1Q15438 398 aa13.57□□□□□ -0.24
CAPN1-207ENST00000527189 KLHL40Q2TBA0 621 aa13.57□□□□□ -0.24
CAPN1-207ENST00000527189 CCDC157Q569K6 752 aa13.57□□□□□ -0.24
CAPN1-207ENST00000527189 ATXN7L2Q5T6C5 722 aaPredicted RBP13.57□□□□□ -0.24
CAPN1-207ENST00000527189 LEKR1Q6ZMV7 388 aa13.57□□□□□ -0.24
CAPN1-207ENST00000527189 DNAAF5Q86Y56 855 aa13.57□□□□□ -0.24
CAPN1-207ENST00000527189 SLC22A18ASQ8N1D0 253 aa13.57□□□□□ -0.24
CAPN1-207ENST00000527189 ARFGAP1Q8N6T3 406 aa13.57□□□□□ -0.24
CAPN1-207ENST00000527189 RFFLQ8WZ73 363 aa13.57□□□□□ -0.24
CAPN1-207ENST00000527189 SYN2Q92777 582 aaPredicted RBP13.57□□□□□ -0.24
CAPN1-207ENST00000527189 IQCDQ96DY2 449 aa13.57□□□□□ -0.24
CAPN1-207ENST00000527189 ZNF641Q96N77 438 aaPredicted RBP13.57□□□□□ -0.24
CAPN1-207ENST00000527189 DUSP23Q9BVJ7 150 aa13.57□□□□□ -0.24
CAPN1-207ENST00000527189 C1QTNF7Q9BXJ2 289 aa13.57□□□□□ -0.24
CAPN1-207ENST00000527189 KLC2Q9H0B6 622 aa13.57□□□□□ -0.24
CAPN1-207ENST00000527189 ISCUQ9H1K1 167 aa13.57□□□□□ -0.24
CAPN1-207ENST00000527189 DHX35Q9H5Z1 703 aaKnown RBP13.57□□□□□ -0.24
CAPN1-207ENST00000527189 USP29Q9HBJ7 922 aa13.57□□□□□ -0.24
CAPN1-207ENST00000527189 UBA2Q9UBT2 640 aaPredicted RBP13.57□□□□□ -0.24
CAPN1-207ENST00000527189 CNOT8Q9UFF9 292 aaKnown RBP13.57□□□□□ -0.24
CAPN1-207ENST00000527189 CSNK1G3Q9Y6M4 447 aa13.57□□□□□ -0.24
CAPN1-207ENST00000527189 GOLGA4Q13439 2230 aaKnown RBP13.56□□□□□ -0.24
CAPN1-207ENST00000527189 A0A1W2PQJ5 194 aa13.56□□□□□ -0.24
CAPN1-207ENST00000527189 H3BM21 787 aa13.56□□□□□ -0.24
CAPN1-207ENST00000527189 DDX3XO00571 662 aaKnown RBP eCLIP13.56□□□□□ -0.243e-11■■■■■ 33.2
CAPN1-207ENST00000527189 TRIM38O00635 465 aa13.56□□□□□ -0.24
CAPN1-207ENST00000527189 SCAMP1O15126 338 aa13.56□□□□□ -0.24
CAPN1-207ENST00000527189 RAD51BO15315 384 aa13.56□□□□□ -0.24
CAPN1-207ENST00000527189 DAPK3O43293 454 aa13.56□□□□□ -0.24
CAPN1-207ENST00000527189 SIGLEC6O43699 453 aa13.56□□□□□ -0.24
CAPN1-207ENST00000527189 PRPSAP2O60256 369 aa13.56□□□□□ -0.24
CAPN1-207ENST00000527189 PRAMEF11O60813 436 aa13.56□□□□□ -0.24
CAPN1-207ENST00000527189 SDC3O75056 442 aa13.56□□□□□ -0.24
CAPN1-207ENST00000527189 TM7SF2O76062 418 aa13.56□□□□□ -0.24
CAPN1-207ENST00000527189 CSF2P04141 144 aa13.56□□□□□ -0.24
CAPN1-207ENST00000527189 MIPP30301 263 aa13.56□□□□□ -0.24
CAPN1-207ENST00000527189 PCK1P35558 622 aa13.56□□□□□ -0.24
CAPN1-207ENST00000527189 PFN3P60673 137 aa13.56□□□□□ -0.24
CAPN1-207ENST00000527189 YPEL5P62699 121 aa13.56□□□□□ -0.24
CAPN1-207ENST00000527189 NSUN2Q08J23 767 aaKnown RBP eCLIP13.56□□□□□ -0.24
CAPN1-207ENST00000527189 ELP6Q0PNE2 266 aa13.56□□□□□ -0.24
CAPN1-207ENST00000527189 PTK2BQ14289 1009 aa13.56□□□□□ -0.24
CAPN1-207ENST00000527189 FZD2Q14332 565 aa13.56□□□□□ -0.24
CAPN1-207ENST00000527189 PTAR1Q7Z6K3 402 aaPredicted RBP13.56□□□□□ -0.24
CAPN1-207ENST00000527189 PARGQ86W56 976 aa13.56□□□□□ -0.24
CAPN1-207ENST00000527189 LZTR1Q8N653 840 aa13.56□□□□□ -0.24
CAPN1-207ENST00000527189 FAM181AQ8N9Y4 354 aa13.56□□□□□ -0.24
CAPN1-207ENST00000527189 CENPTQ96BT3 561 aa13.56□□□□□ -0.24
CAPN1-207ENST00000527189 TUBGCP5Q96RT8 1024 aa13.56□□□□□ -0.24
CAPN1-207ENST00000527189 PDFQ9HBH1 243 aa13.56□□□□□ -0.24
CAPN1-207ENST00000527189 EVA1BQ9NVM1 165 aa13.56□□□□□ -0.24
CAPN1-207ENST00000527189 NLGN3Q9NZ94 848 aa13.56□□□□□ -0.24
CAPN1-207ENST00000527189 IPO11Q9UI26 975 aaKnown RBP13.56□□□□□ -0.24
CAPN1-207ENST00000527189 FAM149AA5PLN7 773 aa13.55□□□□□ -0.24
CAPN1-207ENST00000527189 SPINT1O43278 529 aa13.55□□□□□ -0.24
CAPN1-207ENST00000527189 GIMD1P0DJR0 217 aa13.55□□□□□ -0.24
CAPN1-207ENST00000527189 CKMT1AP12532 417 aa13.55□□□□□ -0.24
CAPN1-207ENST00000527189 NME1P15531 152 aaKnown RBP13.55□□□□□ -0.24
CAPN1-207ENST00000527189 TIMP2P16035 220 aa13.55□□□□□ -0.24
CAPN1-207ENST00000527189 PAPOLAP51003 745 aaKnown RBP13.55□□□□□ -0.24
CAPN1-207ENST00000527189 DUSP3P51452 185 aaPredicted RBP13.55□□□□□ -0.24
CAPN1-207ENST00000527189 RFTN1Q14699 578 aaPredicted RBP13.55□□□□□ -0.24
CAPN1-207ENST00000527189 TMEM52BQ4KMG9 183 aa13.55□□□□□ -0.24
CAPN1-207ENST00000527189 BOLA3Q53S33 107 aa13.55□□□□□ -0.24
CAPN1-207ENST00000527189 AFMIDQ63HM1 303 aa13.55□□□□□ -0.24
CAPN1-207ENST00000527189 E4F1Q66K89 784 aaPredicted RBP13.55□□□□□ -0.24
CAPN1-207ENST00000527189 BRAT1Q6PJG6 821 aa13.55□□□□□ -0.24
CAPN1-207ENST00000527189 RFX8Q6ZV50 586 aa13.55□□□□□ -0.24
CAPN1-207ENST00000527189 VPS36Q86VN1 386 aa13.55□□□□□ -0.24
CAPN1-207ENST00000527189 MDM1Q8TC05 714 aa13.55□□□□□ -0.24
CAPN1-207ENST00000527189 CXorf40AQ8TE69 158 aa13.55□□□□□ -0.24
CAPN1-207ENST00000527189 BTN2A2Q8WVV5 523 aa13.55□□□□□ -0.24
CAPN1-207ENST00000527189 ZNF653Q96CK0 615 aa13.55□□□□□ -0.24
CAPN1-207ENST00000527189 TBATAQ96M53 351 aa13.55□□□□□ -0.24
CAPN1-207ENST00000527189 SNRNP25Q9BV90 132 aaKnown RBP13.55□□□□□ -0.24
CAPN1-207ENST00000527189 SLC39A8Q9C0K1 460 aa13.55□□□□□ -0.24
CAPN1-207ENST00000527189 NRSN2Q9GZP1 204 aa13.55□□□□□ -0.24
CAPN1-207ENST00000527189 SUV39H2Q9H5I1 410 aa13.55□□□□□ -0.24
CAPN1-207ENST00000527189 UCKL1Q9NWZ5 548 aa13.55□□□□□ -0.24
CAPN1-207ENST00000527189 DNAJC28Q9NX36 388 aa13.55□□□□□ -0.24
CAPN1-207ENST00000527189 NCKIPSDQ9NZQ3 722 aa13.55□□□□□ -0.24
CAPN1-207ENST00000527189 LHX3Q9UBR4 397 aa13.55□□□□□ -0.24
CAPN1-207ENST00000527189 PCSK1NQ9UHG2 260 aa13.55□□□□□ -0.24
CAPN1-207ENST00000527189 UNC79Q9P2D8 2635 aa13.54□□□□□ -0.24
CAPN1-207ENST00000527189 TSPAN11A1L157 253 aa13.54□□□□□ -0.24
CAPN1-207ENST00000527189 CFAP69A5D8W1 941 aa13.54□□□□□ -0.24
CAPN1-207ENST00000527189 CYSRT1A8MQ03 144 aa13.54□□□□□ -0.24
CAPN1-207ENST00000527189 J3KR12 359 aa13.54□□□□□ -0.24
CAPN1-207ENST00000527189 ATMINO43313 823 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-207ENST00000527189 LRCH4O75427 683 aa13.54□□□□□ -0.24
CAPN1-207ENST00000527189 GP1BAP07359 652 aa13.54□□□□□ -0.24
CAPN1-207ENST00000527189 SKILP12757 684 aa13.54□□□□□ -0.24
CAPN1-207ENST00000527189 ERCC2P18074 760 aa13.54□□□□□ -0.24
CAPN1-207ENST00000527189 XPAP23025 273 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-207ENST00000527189 PBX1P40424 430 aa13.54□□□□□ -0.24
CAPN1-207ENST00000527189 UBASH3AP57075 661 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms