RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 WASHC5Q12768 1159 aa13.07□□□□□ -0.32
SMPD1-202ENST00000526280 LPAL2Q16609 132 aa13.07□□□□□ -0.32
SMPD1-202ENST00000526280 TEX44Q53QW1 395 aa13.07□□□□□ -0.32
SMPD1-202ENST00000526280 FBXL19Q6PCT2 694 aa13.07□□□□□ -0.32
SMPD1-202ENST00000526280 PARS2Q7L3T8 475 aaKnown RBP13.07□□□□□ -0.32
SMPD1-202ENST00000526280 CAMK1DQ8IU85 385 aa13.07□□□□□ -0.32
SMPD1-202ENST00000526280 DEFB119Q8N690 84 aa13.07□□□□□ -0.32
SMPD1-202ENST00000526280 OR14C36Q8NHC7 312 aa13.07□□□□□ -0.32
SMPD1-202ENST00000526280 HTR3CQ8WXA8 447 aa13.07□□□□□ -0.32
SMPD1-202ENST00000526280 NKD2Q969F2 451 aaPredicted RBP13.07□□□□□ -0.32
SMPD1-202ENST00000526280 LOXL4Q96JB6 756 aa13.07□□□□□ -0.32
SMPD1-202ENST00000526280 SEMA3CQ99985 751 aa13.07□□□□□ -0.32
SMPD1-202ENST00000526280 FAM118BQ9BPY3 351 aa13.07□□□□□ -0.32
SMPD1-202ENST00000526280 SEPT10Q9P0V9 454 aa13.07□□□□□ -0.32
SMPD1-202ENST00000526280 R3HDM2Q9Y2K5 976 aaKnown RBP13.07□□□□□ -0.32
SMPD1-202ENST00000526280 ZFHX2Q9C0A1 2572 aaPredicted RBP13.06□□□□□ -0.32
SMPD1-202ENST00000526280 USP34Q70CQ2 3546 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 CEP192Q8TEP8 1941 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 UQCRHLA0A096LP55 91 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 TSPAN11A1L157 253 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 BCLAF3A2AJT9 711 aaKnown RBP13.06□□□□□ -0.32
SMPD1-202ENST00000526280 LRRC72A6NJI9 287 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 METTL12A8MUP2 240 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 TRAFD1O14545 582 aaPredicted RBP13.06□□□□□ -0.32
SMPD1-202ENST00000526280 HTRA2O43464 458 aaPredicted RBP13.06□□□□□ -0.32
SMPD1-202ENST00000526280 SOCS5O75159 536 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 ATP1A1P05023 1023 aaKnown RBP13.06□□□□□ -0.32
SMPD1-202ENST00000526280 UQCRHP07919 91 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 TIMP2P16035 220 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 RBL1P28749 1068 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 PTGER3P43115 390 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 GNG11P61952 73 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 DSC2Q02487 901 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 ITKQ08881 620 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 NIPAL4Q0D2K0 466 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 IHHQ14623 411 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 FAM182AQ5T1J6 154 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 LAIR1Q6GTX8 287 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 DARS2Q6PI48 645 aaKnown RBP13.06□□□□□ -0.32
SMPD1-202ENST00000526280 BRAT1Q6PJG6 821 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 SLC41A1Q8IVJ1 513 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 CDKL3Q8IVW4 592 aaPredicted RBP13.06□□□□□ -0.32
SMPD1-202ENST00000526280 MYRIPQ8NFW9 859 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 OR2T34Q8NGX1 318 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 ARRDC2Q8TBH0 407 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 FOXJ1Q92949 421 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 RAB7BQ96AH8 199 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 ECHDC3Q96DC8 303 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 PBKQ96KB5 322 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 TEKT5Q96M29 485 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 AGAP3Q96P47 875 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 VAT1Q99536 393 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 CEP41Q9BYV8 373 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 C6orf106Q9H6K1 298 aaPredicted RBP13.06□□□□□ -0.32
SMPD1-202ENST00000526280 C10orf88Q9H8K7 445 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 USP29Q9HBJ7 922 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 TTLL3Q9Y4R7 772 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 PCDHGC4Q9Y5F7 938 aa13.06□□□□□ -0.32
SMPD1-202ENST00000526280 TBC1D3DA0A087WVF3 549 aa13.05□□□□□ -0.32
SMPD1-202ENST00000526280 TBC1D3IA0A087WXS9 549 aa13.05□□□□□ -0.32
SMPD1-202ENST00000526280 TBC1D3EA0A087X179 549 aa13.05□□□□□ -0.32
SMPD1-202ENST00000526280 TBC1D3KA0A087X1G2 549 aa13.05□□□□□ -0.32
SMPD1-202ENST00000526280 TBC1D3FA6NER0 549 aaPredicted RBP13.05□□□□□ -0.32
SMPD1-202ENST00000526280 FAM47DPA6NHR8 397 aa13.05□□□□□ -0.32
SMPD1-202ENST00000526280 TBC1D3LB9A6J9 549 aa13.05□□□□□ -0.32
SMPD1-202ENST00000526280 AP1G1O43747 822 aa13.05□□□□□ -0.32
SMPD1-202ENST00000526280 CEP104O60308 925 aa13.05□□□□□ -0.32
SMPD1-202ENST00000526280 FGGP02679 453 aa13.05□□□□□ -0.32
SMPD1-202ENST00000526280 MMP2P08253 660 aa13.05□□□□□ -0.32
SMPD1-202ENST00000526280 TBC1D3HP0C7X1 549 aa13.05□□□□□ -0.32
SMPD1-202ENST00000526280 ABL2P42684 1182 aa13.05□□□□□ -0.32
SMPD1-202ENST00000526280 DHPSP49366 369 aaPredicted RBP13.05□□□□□ -0.32
SMPD1-202ENST00000526280 KIAA0895LQ68EN5 471 aa13.05□□□□□ -0.32
SMPD1-202ENST00000526280 TBC1D3GQ6DHY5 549 aa13.05□□□□□ -0.32
SMPD1-202ENST00000526280 TBC1D3CQ6IPX1 549 aa13.05□□□□□ -0.32
SMPD1-202ENST00000526280 ADAT2Q7Z6V5 191 aaKnown RBP13.05□□□□□ -0.32
SMPD1-202ENST00000526280 TTC7BQ86TV6 843 aa13.05□□□□□ -0.32
SMPD1-202ENST00000526280 ZSWIM9Q86XI8 627 aa13.05□□□□□ -0.32
SMPD1-202ENST00000526280 TBC1D3Q8IZP1 549 aaPredicted RBP13.05□□□□□ -0.32
SMPD1-202ENST00000526280 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.05□□□□□ -0.32
SMPD1-202ENST00000526280 SLC35B2Q8TB61 432 aa13.05□□□□□ -0.32
SMPD1-202ENST00000526280 SPOCK2Q92563 424 aa13.05□□□□□ -0.32
SMPD1-202ENST00000526280 WDR24Q96S15 920 aa13.05□□□□□ -0.32
SMPD1-202ENST00000526280 FRMD8P1Q9BZ68 369 aaPredicted RBP13.05□□□□□ -0.32
SMPD1-202ENST00000526280 SLC25A51Q9H1U9 297 aa13.05□□□□□ -0.32
SMPD1-202ENST00000526280 PREBQ9HCU5 417 aa13.05□□□□□ -0.32
SMPD1-202ENST00000526280 FADS3Q9Y5Q0 445 aa13.05□□□□□ -0.32
SMPD1-202ENST00000526280 ANKRD36A6QL64 1941 aa13.05□□□□□ -0.32
SMPD1-202ENST00000526280 OTOGLQ3ZCN5 2332 aa13.04□□□□□ -0.32
SMPD1-202ENST00000526280 A0A1W2PQ67 120 aa13.04□□□□□ -0.32
SMPD1-202ENST00000526280 AREL1O15033 823 aa13.04□□□□□ -0.32
SMPD1-202ENST00000526280 GFRA3O60609 400 aa13.04□□□□□ -0.32
SMPD1-202ENST00000526280 ZNF189O75820 626 aaPredicted RBP13.04□□□□□ -0.32
SMPD1-202ENST00000526280 EPN2O95208 641 aa13.04□□□□□ -0.32
SMPD1-202ENST00000526280 IGHV4-34P06331 123 aa13.04□□□□□ -0.32
SMPD1-202ENST00000526280 SERPINF2P08697 491 aa13.04□□□□□ -0.32
SMPD1-202ENST00000526280 CD68P34810 354 aaPredicted RBP13.04□□□□□ -0.32
SMPD1-202ENST00000526280 CCR5P51681 352 aa13.04□□□□□ -0.32
SMPD1-202ENST00000526280 SUOXP51687 545 aa13.04□□□□□ -0.32
SMPD1-202ENST00000526280 TRAF2Q12933 501 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms