RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 TSPAN6O43657 245 aa17.45■□□□□ 0.38
LMX1B-203ENST00000526117 APOC2P02655 101 aa17.45■□□□□ 0.38
LMX1B-203ENST00000526117 KRT10P13645 584 aa17.45■□□□□ 0.38
LMX1B-203ENST00000526117 LMNB2Q03252 620 aa17.45■□□□□ 0.38
LMX1B-203ENST00000526117 PRKD1Q15139 912 aaPredicted RBP17.45■□□□□ 0.38
LMX1B-203ENST00000526117 POM121L1PQ3SYA9 428 aa17.45■□□□□ 0.38
LMX1B-203ENST00000526117 TMEM259Q4ZIN3 620 aa17.45■□□□□ 0.38
LMX1B-203ENST00000526117 KIAA1161Q6NSJ0 714 aa17.45■□□□□ 0.38
LMX1B-203ENST00000526117 DEFB119Q8N690 84 aa17.45■□□□□ 0.38
LMX1B-203ENST00000526117 TRIM58Q8NG06 486 aa17.45■□□□□ 0.38
LMX1B-203ENST00000526117 P3H4Q92791 437 aa17.45■□□□□ 0.38
LMX1B-203ENST00000526117 ALS2CR12Q96Q35 445 aa17.45■□□□□ 0.38
LMX1B-203ENST00000526117 OSBPL8Q9BZF1 889 aa17.45■□□□□ 0.38
LMX1B-203ENST00000526117 POLR1EQ9GZS1 481 aaKnown RBP17.45■□□□□ 0.38
LMX1B-203ENST00000526117 TBC1D3DA0A087WVF3 549 aa17.44■□□□□ 0.38
LMX1B-203ENST00000526117 TBC1D3IA0A087WXS9 549 aa17.44■□□□□ 0.38
LMX1B-203ENST00000526117 TBC1D3EA0A087X179 549 aa17.44■□□□□ 0.38
LMX1B-203ENST00000526117 TBC1D3KA0A087X1G2 549 aa17.44■□□□□ 0.38
LMX1B-203ENST00000526117 TBC1D3FA6NER0 549 aaPredicted RBP17.44■□□□□ 0.38
LMX1B-203ENST00000526117 HACD1B0YJ81 288 aa17.44■□□□□ 0.38
LMX1B-203ENST00000526117 TBC1D3LB9A6J9 549 aa17.44■□□□□ 0.38
LMX1B-203ENST00000526117 KHNYNO15037 678 aaKnown RBP17.44■□□□□ 0.38
LMX1B-203ENST00000526117 MTSS1O43312 755 aa17.44■□□□□ 0.38
LMX1B-203ENST00000526117 HTRA2O43464 458 aaPredicted RBP17.44■□□□□ 0.38
LMX1B-203ENST00000526117 RNGTTO60942 597 aaKnown RBP17.44■□□□□ 0.38
LMX1B-203ENST00000526117 ZNF189O75820 626 aaPredicted RBP17.44■□□□□ 0.38
LMX1B-203ENST00000526117 FSBPO95073 299 aa17.44■□□□□ 0.38
LMX1B-203ENST00000526117 MAP3K6O95382 1288 aa17.44■□□□□ 0.38
LMX1B-203ENST00000526117 FTCDO95954 541 aa17.44■□□□□ 0.38
LMX1B-203ENST00000526117 TBC1D3HP0C7X1 549 aa17.44■□□□□ 0.38
LMX1B-203ENST00000526117 SCNN1BP51168 640 aa17.44■□□□□ 0.38
LMX1B-203ENST00000526117 LIMK1P53667 647 aa17.44■□□□□ 0.38
LMX1B-203ENST00000526117 ARHGAP8P85298 464 aa17.44■□□□□ 0.38
LMX1B-203ENST00000526117 BCL2L1Q07817 233 aa17.44■□□□□ 0.38
LMX1B-203ENST00000526117 ADCY2Q08462 1091 aa17.44■□□□□ 0.38
LMX1B-203ENST00000526117 XRCC4Q13426 336 aa17.44■□□□□ 0.38
LMX1B-203ENST00000526117 TBC1D3GQ6DHY5 549 aa17.44■□□□□ 0.38
LMX1B-203ENST00000526117 TBC1D3CQ6IPX1 549 aa17.44■□□□□ 0.38
LMX1B-203ENST00000526117 HORMAD1Q86X24 394 aa17.44■□□□□ 0.38
LMX1B-203ENST00000526117 RGL4Q8IZJ4 473 aa17.44■□□□□ 0.38
LMX1B-203ENST00000526117 TBC1D3Q8IZP1 549 aaPredicted RBP17.44■□□□□ 0.38
LMX1B-203ENST00000526117 CCNYQ8ND76 341 aa17.44■□□□□ 0.38
LMX1B-203ENST00000526117 ASB12Q8WXK4 309 aa17.44■□□□□ 0.38
LMX1B-203ENST00000526117 LGMNQ99538 433 aa17.44■□□□□ 0.38
LMX1B-203ENST00000526117 ZDHHC5Q9C0B5 715 aa17.44■□□□□ 0.38
LMX1B-203ENST00000526117 EIF2B4Q9UI10 523 aaKnown RBP17.44■□□□□ 0.38
LMX1B-203ENST00000526117 SLC6A14Q9UN76 642 aa17.44■□□□□ 0.38
LMX1B-203ENST00000526117 ATP8A1Q9Y2Q0 1164 aa17.44■□□□□ 0.38
LMX1B-203ENST00000526117 NUMA1Q14980 2115 aa17.44■□□□□ 0.38
LMX1B-203ENST00000526117 EP300Q09472 2414 aaPredicted RBP17.43■□□□□ 0.38
LMX1B-203ENST00000526117 PCDH15Q96QU1 1955 aa17.43■□□□□ 0.38
LMX1B-203ENST00000526117 BCAT2O15382 392 aaPredicted RBP17.43■□□□□ 0.38
LMX1B-203ENST00000526117 SPINT1O43278 529 aa17.43■□□□□ 0.38
LMX1B-203ENST00000526117 TJP3O95049 919 aa17.43■□□□□ 0.38
LMX1B-203ENST00000526117 PIGNO95427 931 aa17.43■□□□□ 0.38
LMX1B-203ENST00000526117 PYGMP11217 842 aa17.43■□□□□ 0.38
LMX1B-203ENST00000526117 PECAM1P16284 738 aaPredicted RBP17.43■□□□□ 0.38
LMX1B-203ENST00000526117 ABL2P42684 1182 aa17.43■□□□□ 0.38
LMX1B-203ENST00000526117 GRIA4P48058 902 aa17.43■□□□□ 0.38
LMX1B-203ENST00000526117 AFF3P51826 1226 aaKnown RBP17.43■□□□□ 0.38
LMX1B-203ENST00000526117 PPP2CBP62714 309 aa17.43■□□□□ 0.38
LMX1B-203ENST00000526117 POLR2LP62875 67 aaKnown RBP17.43■□□□□ 0.38
LMX1B-203ENST00000526117 DYNLT1P63172 113 aa17.43■□□□□ 0.38
LMX1B-203ENST00000526117 RPS21P63220 83 aaKnown RBP17.43■□□□□ 0.38
LMX1B-203ENST00000526117 RACK1P63244 317 aaKnown RBP17.43■□□□□ 0.38
LMX1B-203ENST00000526117 PPP2CAP67775 309 aa17.43■□□□□ 0.38
LMX1B-203ENST00000526117 ELP6Q0PNE2 266 aa17.43■□□□□ 0.38
LMX1B-203ENST00000526117 SLC14A2Q15849 920 aa17.43■□□□□ 0.38
LMX1B-203ENST00000526117 UGP2Q16851 508 aa17.43■□□□□ 0.38
LMX1B-203ENST00000526117 SETMARQ53H47 684 aaPredicted RBP17.43■□□□□ 0.38
LMX1B-203ENST00000526117 TRIM61Q5EBN2 209 aa17.43■□□□□ 0.38
LMX1B-203ENST00000526117 MEI1Q5TIA1 1274 aa17.43■□□□□ 0.38
LMX1B-203ENST00000526117 KAZNQ674X7 775 aa17.43■□□□□ 0.38
LMX1B-203ENST00000526117 NPNTQ6UXI9 565 aa17.43■□□□□ 0.38
LMX1B-203ENST00000526117 PRPF39Q86UA1 669 aaKnown RBP17.43■□□□□ 0.38
LMX1B-203ENST00000526117 TFB1MQ8WVM0 346 aaKnown RBP17.43■□□□□ 0.38
LMX1B-203ENST00000526117 NUSAP1Q9BXS6 441 aaKnown RBP17.43■□□□□ 0.38
LMX1B-203ENST00000526117 KCNF1Q9H3M0 494 aa17.43■□□□□ 0.38
LMX1B-203ENST00000526117 NOD2Q9HC29 1040 aa17.43■□□□□ 0.38
LMX1B-203ENST00000526117 NT5MQ9NPB1 228 aa17.43■□□□□ 0.38
LMX1B-203ENST00000526117 SCUBE2Q9NQ36 999 aa17.43■□□□□ 0.38
LMX1B-203ENST00000526117 RBM22Q9NW64 420 aaKnown RBP eCLIP17.43■□□□□ 0.38
LMX1B-203ENST00000526117 ATXN2Q99700 1313 aaKnown RBP17.43■□□□□ 0.38
LMX1B-203ENST00000526117 LNP1A1A4G5 178 aa17.42■□□□□ 0.38
LMX1B-203ENST00000526117 CFAP69A5D8W1 941 aa17.42■□□□□ 0.38
LMX1B-203ENST00000526117 FAM47DPA6NHR8 397 aa17.42■□□□□ 0.38
LMX1B-203ENST00000526117 UPK3BL1B0FP48 263 aa17.42■□□□□ 0.38
LMX1B-203ENST00000526117 UPK3BL2E5RIL1 263 aa17.42■□□□□ 0.38
LMX1B-203ENST00000526117 TIMP2P16035 220 aa17.42■□□□□ 0.38
LMX1B-203ENST00000526117 NOMO1Q15155 1222 aa17.42■□□□□ 0.38
LMX1B-203ENST00000526117 ZNF284Q2VY69 593 aa17.42■□□□□ 0.38
LMX1B-203ENST00000526117 CAMK1DQ8IU85 385 aa17.42■□□□□ 0.38
LMX1B-203ENST00000526117 C12orf50Q8NA57 414 aaPredicted RBP17.42■□□□□ 0.38
LMX1B-203ENST00000526117 FAM174AQ8TBP5 190 aa17.42■□□□□ 0.38
LMX1B-203ENST00000526117 FEM1CQ96JP0 617 aa17.42■□□□□ 0.38
LMX1B-203ENST00000526117 NSMCE3Q96MG7 304 aa17.42■□□□□ 0.38
LMX1B-203ENST00000526117 QKIQ96PU8 341 aaKnown RBP eCLIP17.42■□□□□ 0.38
LMX1B-203ENST00000526117 VAT1Q99536 393 aa17.42■□□□□ 0.38
LMX1B-203ENST00000526117 EBF2Q9HAK2 575 aa17.42■□□□□ 0.38
LMX1B-203ENST00000526117 TM9SF3Q9HD45 589 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms