RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 CACTINQ8WUQ7 758 aaKnown RBP3.35□□□□□ -1.87
CSDE1-209ENST00000525132 HDAC2Q92769 488 aaKnown RBP3.35□□□□□ -1.87
CSDE1-209ENST00000525132 USP13Q92995 863 aaPredicted RBP3.35□□□□□ -1.87
CSDE1-209ENST00000525132 ZNF566Q969W8 418 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 ZNF503Q96F45 646 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 MSANTD3Q96H12 275 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 PRR11Q96HE9 360 aaPredicted RBP3.35□□□□□ -1.87
CSDE1-209ENST00000525132 CNDP2Q96KP4 475 aaKnown RBP3.35□□□□□ -1.87
CSDE1-209ENST00000525132 CNOT6LQ96LI5 555 aaKnown RBP3.35□□□□□ -1.87
CSDE1-209ENST00000525132 ZNF512Q96ME7 567 aaPredicted RBP3.35□□□□□ -1.87
CSDE1-209ENST00000525132 ADI1Q9BV57 179 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 APOL6Q9BWW8 343 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 SORBS1Q9BX66 1292 aaKnown RBP3.35□□□□□ -1.87
CSDE1-209ENST00000525132 SLC29A3Q9BZD2 475 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.35□□□□□ -1.87
CSDE1-209ENST00000525132 LIME1Q9H400 295 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 DNAJC18Q9H819 358 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 RASSF1Q9NS23 344 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 LRFN1Q9P244 771 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 GRHPRQ9UBQ7 328 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 MYRFQ9Y2G1 1151 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 WBP11Q9Y2W2 641 aaKnown RBP3.35□□□□□ -1.87
CSDE1-209ENST00000525132 EPN1Q9Y6I3 576 aaPredicted RBP3.35□□□□□ -1.87
CSDE1-209ENST00000525132 DIDO1Q9BTC0 2240 aaKnown RBP3.35□□□□□ -1.87
CSDE1-209ENST00000525132 GOLGA6L3A6NEY3 463 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 LRRC14BA6NHZ5 514 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 ASB14A6NK59 587 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 ISM1B1AKI9 464 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 F8W8V4 182 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 C19orf84I3L1E1 186 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 RNF103O00237 685 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 MUSKO15146 869 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 AP5Z1O43299 807 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 HOXA3O43365 443 aaPredicted RBP3.34□□□□□ -1.87
CSDE1-209ENST00000525132 PLA2G6O60733 806 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 GASTP01350 101 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 BRAFP15056 766 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 GYPEP15421 78 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 ALOX15P16050 662 aaPredicted RBP3.34□□□□□ -1.87
CSDE1-209ENST00000525132 PSMC3P17980 439 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 EIF2S2P20042 333 aaKnown RBP3.34□□□□□ -1.87
CSDE1-209ENST00000525132 RRM1P23921 792 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 ZFP36P26651 326 aaKnown RBP3.34□□□□□ -1.87
CSDE1-209ENST00000525132 SLC7A1P30825 629 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 SLC5A2P31639 672 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 ELF1P32519 619 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 ALDH9A1P49189 494 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 SCNN1GP51170 649 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 HK3P52790 923 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 ITGA8P53708 1063 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 SUMO3P55854 103 aaPredicted RBP3.34□□□□□ -1.87
CSDE1-209ENST00000525132 NKX6-1P78426 367 aaPredicted RBP3.34□□□□□ -1.87
CSDE1-209ENST00000525132 FOLH1Q04609 750 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 TOB2Q14106 344 aaPredicted RBP3.34□□□□□ -1.87
CSDE1-209ENST00000525132 NOMO1Q15155 1222 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 CCDC96Q2M329 555 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 FAM214AQ32MH5 1076 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 ZACNQ401N2 412 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 USH1GQ495M9 461 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 MANEAQ5SRI9 462 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 FKBP15Q5T1M5 1219 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 CRIP3Q6Q6R5 217 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 C16orf54Q6UWD8 224 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 RNF207Q6ZRF8 634 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 Q6ZRM9 215 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 RFX8Q6ZV50 586 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 ZNF572Q7Z3I7 529 aaPredicted RBP3.34□□□□□ -1.87
CSDE1-209ENST00000525132 TBC1D1Q86TI0 1168 aaPredicted RBP3.34□□□□□ -1.87
CSDE1-209ENST00000525132 ELOA2Q8IYF1 753 aaPredicted RBP3.34□□□□□ -1.87
CSDE1-209ENST00000525132 COLGALT2Q8IYK4 626 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 CACNA2D3Q8IZS8 1091 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 TXLNBQ8N3L3 684 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 SH2D3CQ8N5H7 860 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 C3orf20Q8ND61 904 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 GPR156Q8NFN8 814 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 RPLP0P6Q8NHW5 317 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 ZNF480Q8WV37 535 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 ATP6V0A1Q93050 837 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 MTFMTQ96DP5 389 aaKnown RBP3.34□□□□□ -1.87
CSDE1-209ENST00000525132 SLC35A4Q96G79 324 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 CEP95Q96GE4 821 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 RANBP9Q96S59 729 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 RMDN3Q96TC7 470 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 FAM167BQ9BTA0 163 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 COLEC11Q9BWP8 271 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 TMEM120AQ9BXJ8 343 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 MAGEH1Q9H213 219 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 C12orf65Q9H3J6 166 aaKnown RBP3.34□□□□□ -1.87
CSDE1-209ENST00000525132 UNC45AQ9H3U1 944 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 BCO1Q9HAY6 547 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 OBP2BQ9NPH6 170 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 LMBRD1Q9NUN5 540 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 BLOC1S4Q9NUP1 217 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 PNPOQ9NVS9 261 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 FAM30AQ9NZY2 134 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 CPNE7Q9UBL6 633 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 PCDHA3Q9Y5H8 950 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 RAD50Q92878 1312 aa3.34□□□□□ -1.87
CSDE1-209ENST00000525132 ANKUB1A6NFN9 424 aa3.33□□□□□ -1.88
CSDE1-209ENST00000525132 MARCH11A6NNE9 402 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms