RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 FAM133AQ8N9E0 248 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 TRPV1Q8NER1 839 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 GPRC5AQ8NFJ5 357 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 CRYGNQ8WXF5 182 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 LRTOMTQ8WZ04 291 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 TRIB2Q92519 343 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 RRP36Q96EU6 259 aaKnown RBP3.28□□□□□ -1.88
CSDE1-208ENST00000524652 P2RY11Q96G91 374 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 APIPQ96GX9 242 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 ZSCAN31Q96LW9 406 aaPredicted RBP3.28□□□□□ -1.88
CSDE1-208ENST00000524652 FCRL5Q96RD9 977 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 TAAR1Q96RJ0 339 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 LZTS2Q9BRK4 669 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 LLPHQ9BRT6 129 aaKnown RBP3.28□□□□□ -1.88
CSDE1-208ENST00000524652 TEX13BQ9BXU2 312 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 ZMYND12Q9H0C1 365 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 ACAD9Q9H845 621 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 SEMA4BQ9NPR2 832 aaPredicted RBP3.28□□□□□ -1.88
CSDE1-208ENST00000524652 ARL8BQ9NVJ2 186 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 CYP39A1Q9NYL5 469 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 ORC3Q9UBD5 711 aaPredicted RBP3.28□□□□□ -1.88
CSDE1-208ENST00000524652 OGDHLQ9ULD0 1010 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 PRUNE2Q8WUY3 3088 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 XIRP2A4UGR9 3374 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 PTPRSQ13332 1948 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 CHD9Q3L8U1 2897 aa3.28□□□□□ -1.88
CSDE1-208ENST00000524652 IGLV5-39A0A0G2JS06 123 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 CCDC196A0A1B0GTZ2 297 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 ESYT2A0FGR8 921 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 SMCO2A6NFE2 343 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 C2CD4BA6NLJ0 364 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 BTBD18B2RXH4 712 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 RRHO14718 337 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 TNPO2O14787 897 aaKnown RBP3.27□□□□□ -1.89
CSDE1-208ENST00000524652 CPLX1O14810 134 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 SLC25A27O95847 323 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 SNAI1O95863 264 aaPredicted RBP3.27□□□□□ -1.89
CSDE1-208ENST00000524652 MBPP02686 304 aaPredicted RBP3.27□□□□□ -1.89
CSDE1-208ENST00000524652 MMP1P03956 469 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 TMIGD3P0DMS9 266 aaPredicted RBP3.27□□□□□ -1.89
CSDE1-208ENST00000524652 MYF5P13349 255 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 BTF3P20290 206 aaKnown RBP3.27□□□□□ -1.89
CSDE1-208ENST00000524652 TNFRSF1BP20333 461 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 CYP2B6P20813 491 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 SYT1P21579 422 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 CALML3P27482 149 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 NTSR1P30989 418 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 MAPK4P31152 587 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 HTR7P34969 479 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 CARSP49589 748 aaKnown RBP3.27□□□□□ -1.89
CSDE1-208ENST00000524652 MCM2P49736 904 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 NAPAP54920 295 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 SLC12A2P55011 1212 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 KRTAP10-7P60409 375 aaPredicted RBP3.27□□□□□ -1.89
CSDE1-208ENST00000524652 WDR5P61964 334 aaKnown RBP3.27□□□□□ -1.89
CSDE1-208ENST00000524652 DNASE1L3Q13609 305 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 PGM5Q15124 567 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 PRAMEF19Q5SWL8 479 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 MANEALQ5VSG8 457 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 WDR78Q5VTH9 848 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 JAKMIP3Q5VZ66 844 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 NXNQ6DKJ4 435 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 FAM173BQ6P4H8 233 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 CLEC9AQ6UXN8 241 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 FAM57BQ71RH2 274 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 SRGAP1Q7Z6B7 1085 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 SESTD1Q86VW0 696 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 HSCBQ8IWL3 235 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 PELI3Q8N2H9 469 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 ACRBPQ8NEB7 543 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 MBD3L2Q8NHZ7 208 aaPredicted RBP3.27□□□□□ -1.89
CSDE1-208ENST00000524652 GJA10Q969M2 543 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 NLRP4Q96MN2 994 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 TM2D2Q9BX73 214 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 MROH8Q9H579 483 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 RIC8AQ9NPQ8 531 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 PXMP2Q9NR77 195 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 VPS45Q9NRW7 570 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 SEC63Q9UGP8 760 aaKnown RBP3.27□□□□□ -1.89
CSDE1-208ENST00000524652 ITGB1BP2Q9UKP3 347 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 MTMR6Q9Y217 621 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 TRIM17Q9Y577 477 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 LTBP2Q14767 1821 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 GPR179Q6PRD1 2367 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 C5orf42Q9H799 3197 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 TRIP11Q15643 1979 aa3.27□□□□□ -1.89
CSDE1-208ENST00000524652 TET1Q8NFU7 2136 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 GBF1Q92538 1859 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 TANC1Q9C0D5 1861 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 USP9XQ93008 2570 aaPredicted RBP3.26□□□□□ -1.89
CSDE1-208ENST00000524652 PFASO15067 1338 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 NAV2Q8IVL1 2488 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 IGLV3-22A0A075B6J6 115 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.26□□□□□ -1.89
CSDE1-208ENST00000524652 SLC15A5A6NIM6 579 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 A6NNZ2 444 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 FAM86B1E9PN63 330 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 TLX3O43711 291 aaPredicted RBP3.26□□□□□ -1.89
CSDE1-208ENST00000524652 STRNO43815 780 aa3.26□□□□□ -1.89
CSDE1-208ENST00000524652 SLC37A4O43826 429 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms