RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 PPP1R16AQ96I34 528 aa12.09□□□□□ -0.47
CLN8-207ENST00000524258 ZNF641Q96N77 438 aaPredicted RBP12.09□□□□□ -0.47
CLN8-207ENST00000524258 NUDCD1Q96RS6 583 aa12.09□□□□□ -0.47
CLN8-207ENST00000524258 TUBGCP5Q96RT8 1024 aa12.09□□□□□ -0.47
CLN8-207ENST00000524258 LGMNQ99538 433 aa12.09□□□□□ -0.47
CLN8-207ENST00000524258 IL12RB2Q99665 862 aa12.09□□□□□ -0.47
CLN8-207ENST00000524258 NOD2Q9HC29 1040 aa12.09□□□□□ -0.47
CLN8-207ENST00000524258 DLL3Q9NYJ7 618 aa12.09□□□□□ -0.47
CLN8-207ENST00000524258 SAE1Q9UBE0 346 aaPredicted RBP12.09□□□□□ -0.47
CLN8-207ENST00000524258 ATP8A1Q9Y2Q0 1164 aa12.09□□□□□ -0.47
CLN8-207ENST00000524258 CABIN1Q9Y6J0 2220 aa12.09□□□□□ -0.47
CLN8-207ENST00000524258 A0A1W2PQU0 124 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 GOLGA6L6A8MZA4 724 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 APOL1O14791 398 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 BCAT2O15382 392 aaPredicted RBP12.08□□□□□ -0.48
CLN8-207ENST00000524258 FOXD2O60548 495 aaPredicted RBP12.08□□□□□ -0.48
CLN8-207ENST00000524258 CST8O60676 142 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 RNGTTO60942 597 aaKnown RBP12.08□□□□□ -0.48
CLN8-207ENST00000524258 PYGMP11217 842 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 ZFXP17010 805 aaPredicted RBP12.08□□□□□ -0.48
CLN8-207ENST00000524258 ENGP17813 658 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 MX2P20592 715 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 HSPA9P38646 679 aaKnown RBP12.08□□□□□ -0.48
CLN8-207ENST00000524258 MMP13P45452 471 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 RENBPP51606 427 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 MAXP61244 160 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 AP1S1P61966 158 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 LMNB2Q03252 620 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 RAD51Q06609 339 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 NIPAL4Q0D2K0 466 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 ZBTB17Q13105 803 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 TFDP3Q5H9I0 405 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 MARC1Q5VT66 337 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 SEL1L3Q68CR1 1132 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 AADACL2Q6P093 401 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 BBS12Q6ZW61 710 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 HORMAD1Q86X24 394 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 RFX6Q8HWS3 928 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 RGL4Q8IZJ4 473 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 TMEM145Q8NBT3 493 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 RAB7BQ96AH8 199 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 RMDN1Q96DB5 314 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 HES6Q96HZ4 224 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 CINPQ9BW66 212 aaPredicted RBP12.08□□□□□ -0.48
CLN8-207ENST00000524258 C1QTNF2Q9BXJ5 285 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 KCNF1Q9H3M0 494 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 SUSD2Q9UGT4 822 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 TPX2Q9ULW0 747 aaKnown RBP12.08□□□□□ -0.48
CLN8-207ENST00000524258 ITM2BQ9Y287 266 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 EFR3BQ9Y2G0 817 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 SPTBN2O15020 2390 aa12.08□□□□□ -0.48
CLN8-207ENST00000524258 ASCC3Q8N3C0 2202 aaKnown RBP12.07□□□□□ -0.48
CLN8-207ENST00000524258 CCDC66A2RUB6 948 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 PRR5-ARHGAP8B1AHC4 643 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 ARHGAP33O14559 1287 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 FZD6O60353 706 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 FTCDO95954 541 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 HLA-DQB2P05538 268 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 MMP2P08253 660 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 CCNB1P14635 433 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 MAT2AP31153 395 aaKnown RBP12.07□□□□□ -0.48
CLN8-207ENST00000524258 NR2C2P49116 596 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 CSNK1EP49674 416 aaKnown RBP12.07□□□□□ -0.48
CLN8-207ENST00000524258 SCNN1BP51168 640 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 COPS2P61201 443 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 RACK1P63244 317 aaKnown RBP12.07□□□□□ -0.48
CLN8-207ENST00000524258 IFI35P80217 286 aaPredicted RBP12.07□□□□□ -0.48
CLN8-207ENST00000524258 ARHGAP8P85298 464 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 TRAF2Q12933 501 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 GRM3Q14832 879 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 PRKD1Q15139 912 aaPredicted RBP12.07□□□□□ -0.48
CLN8-207ENST00000524258 UGP2Q16851 508 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 TMEM52BQ4KMG9 183 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 RALGPS1Q5JS13 557 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 LRRC73Q5JTD7 316 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 ZFYVE27Q5T4F4 411 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 FBXL19Q6PCT2 694 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 LAYNQ6UX15 382 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 B4GALNT4Q76KP1 1039 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 RABEPKQ7Z6M1 372 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 CCDC13Q8IYE1 715 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 CBARPQ8N350 705 aaPredicted RBP12.07□□□□□ -0.48
CLN8-207ENST00000524258 OR2I1PQ8NGU4 316 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 TADA1Q96BN2 335 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 RBM41Q96IZ5 413 aaKnown RBP12.07□□□□□ -0.48
CLN8-207ENST00000524258 SLC6A18Q96N87 628 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 KLF6Q99612 283 aaPredicted RBP12.07□□□□□ -0.48
CLN8-207ENST00000524258 MIR1-1HGQ9H1L0 117 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 NT5MQ9NPB1 228 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 DYRK4Q9NR20 520 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 AMACRQ9UHK6 382 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 PACSIN2Q9UNF0 486 aaPredicted RBP12.07□□□□□ -0.48
CLN8-207ENST00000524258 PPIL1Q9Y3C6 166 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 PCDHGC4Q9Y5F7 938 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 HEY1Q9Y5J3 304 aa12.07□□□□□ -0.48
CLN8-207ENST00000524258 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.06□□□□□ -0.48
CLN8-207ENST00000524258 A0A1B0GVT2 93 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 UPK3BL1B0FP48 263 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 UPK3BL2E5RIL1 263 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 KCNK1O00180 336 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms