RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 AASDHQ4L235 1098 aaPredicted RBP12.7□□□□□ -0.38
VEGFA-225ENST00000523950 SETMARQ53H47 684 aaPredicted RBP12.7□□□□□ -0.38
VEGFA-225ENST00000523950 CFAP58Q5T655 872 aa12.7□□□□□ -0.38
VEGFA-225ENST00000523950 PEX26Q7Z412 305 aa12.7□□□□□ -0.38
VEGFA-225ENST00000523950 CCDC50Q8IVM0 306 aa12.7□□□□□ -0.38
VEGFA-225ENST00000523950 CCDC13Q8IYE1 715 aa12.7□□□□□ -0.38
VEGFA-225ENST00000523950 ZCCHC9Q8N567 271 aaKnown RBP12.7□□□□□ -0.38
VEGFA-225ENST00000523950 UBL4BQ8N7F7 174 aa12.7□□□□□ -0.38
VEGFA-225ENST00000523950 C1orf216Q8TAB5 229 aa12.7□□□□□ -0.38
VEGFA-225ENST00000523950 NETO1Q8TDF5 533 aa12.7□□□□□ -0.38
VEGFA-225ENST00000523950 SPOCK2Q92563 424 aa12.7□□□□□ -0.38
VEGFA-225ENST00000523950 KRT35Q92764 455 aa12.7□□□□□ -0.38
VEGFA-225ENST00000523950 OLFM3Q96PB7 478 aa12.7□□□□□ -0.38
VEGFA-225ENST00000523950 ORAI3Q9BRQ5 295 aa12.7□□□□□ -0.38
VEGFA-225ENST00000523950 MIR1-1HGQ9H1L0 117 aa12.7□□□□□ -0.38
VEGFA-225ENST00000523950 EIF2B4Q9UI10 523 aaKnown RBP12.7□□□□□ -0.38
VEGFA-225ENST00000523950 HEY1Q9Y5J3 304 aa12.7□□□□□ -0.38
VEGFA-225ENST00000523950 FADS3Q9Y5Q0 445 aa12.7□□□□□ -0.38
VEGFA-225ENST00000523950 PIEZO1Q92508 2521 aa12.7□□□□□ -0.38
VEGFA-225ENST00000523950 SDK1Q7Z5N4 2213 aa12.69□□□□□ -0.38
VEGFA-225ENST00000523950 LNP1A1A4G5 178 aa12.69□□□□□ -0.38
VEGFA-225ENST00000523950 RNF103O00237 685 aa12.69□□□□□ -0.38
VEGFA-225ENST00000523950 PLK4O00444 970 aa12.69□□□□□ -0.38
VEGFA-225ENST00000523950 INSIG1O15503 277 aa12.69□□□□□ -0.38
VEGFA-225ENST00000523950 CST8O60676 142 aa12.69□□□□□ -0.38
VEGFA-225ENST00000523950 RNGTTO60942 597 aaKnown RBP12.69□□□□□ -0.38
VEGFA-225ENST00000523950 NEBLO76041 1014 aa12.69□□□□□ -0.38
VEGFA-225ENST00000523950 CFIP05156 583 aa12.69□□□□□ -0.38
VEGFA-225ENST00000523950 MAOBP27338 520 aa12.69□□□□□ -0.38
VEGFA-225ENST00000523950 RGRP47804 291 aa12.69□□□□□ -0.38
VEGFA-225ENST00000523950 GRIA4P48058 902 aa12.69□□□□□ -0.38
VEGFA-225ENST00000523950 MARCKSL1P49006 195 aa12.69□□□□□ -0.38
VEGFA-225ENST00000523950 PEX5P50542 639 aa12.69□□□□□ -0.38
VEGFA-225ENST00000523950 SCNN1BP51168 640 aa12.69□□□□□ -0.38
VEGFA-225ENST00000523950 AFF3P51826 1226 aaKnown RBP12.69□□□□□ -0.38
VEGFA-225ENST00000523950 POLR2LP62875 67 aaKnown RBP12.69□□□□□ -0.38
VEGFA-225ENST00000523950 RPS21P63220 83 aaKnown RBP12.69□□□□□ -0.38
VEGFA-225ENST00000523950 RACK1P63244 317 aaKnown RBP12.69□□□□□ -0.38
VEGFA-225ENST00000523950 ELP6Q0PNE2 266 aa12.69□□□□□ -0.38
VEGFA-225ENST00000523950 SLC10A2Q12908 348 aaPredicted RBP12.69□□□□□ -0.38
VEGFA-225ENST00000523950 SLC45A4Q5BKX6 768 aa12.69□□□□□ -0.38
VEGFA-225ENST00000523950 ALG1LQ6GMV1 187 aa12.69□□□□□ -0.38
VEGFA-225ENST00000523950 HORMAD1Q86X24 394 aa12.69□□□□□ -0.38
VEGFA-225ENST00000523950 CCNYQ8ND76 341 aa12.69□□□□□ -0.38
VEGFA-225ENST00000523950 SKA1Q96BD8 255 aa12.69□□□□□ -0.38
VEGFA-225ENST00000523950 ECHDC3Q96DC8 303 aa12.69□□□□□ -0.38
VEGFA-225ENST00000523950 PDLIM2Q96JY6 352 aa12.69□□□□□ -0.38
VEGFA-225ENST00000523950 EDEM2Q9BV94 578 aa12.69□□□□□ -0.38
VEGFA-225ENST00000523950 POLR1EQ9GZS1 481 aaKnown RBP12.69□□□□□ -0.38
VEGFA-225ENST00000523950 TM9SF3Q9HD45 589 aa12.69□□□□□ -0.38
VEGFA-225ENST00000523950 SCUBE2Q9NQ36 999 aa12.69□□□□□ -0.38
VEGFA-225ENST00000523950 TRIM10Q9UDY6 481 aa12.69□□□□□ -0.38
VEGFA-225ENST00000523950 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.69□□□□□ -0.38
VEGFA-225ENST00000523950 ZFHX2Q9C0A1 2572 aaPredicted RBP12.68□□□□□ -0.38
VEGFA-225ENST00000523950 A0A1W2PQU0 124 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 PATE3B3GLJ2 98 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 AREL1O15033 823 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 MUSKO15146 869 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 MTSS1O43312 755 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 ZNF189O75820 626 aaPredicted RBP12.68□□□□□ -0.38
VEGFA-225ENST00000523950 PCDH8O95206 1070 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 MAP3K6O95382 1288 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 PIGNO95427 931 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 KRT10P13645 584 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 CCNB1P14635 433 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 XPAP23025 273 aaPredicted RBP12.68□□□□□ -0.38
VEGFA-225ENST00000523950 NFKBIAP25963 317 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 ABL2P42684 1182 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 PPP2CBP62714 309 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 DYNLT1P63172 113 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 PPP2CAP67775 309 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 IRX4P78413 519 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 IFI35P80217 286 aaPredicted RBP12.68□□□□□ -0.38
VEGFA-225ENST00000523950 TMEM259Q4ZIN3 620 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 KAZNQ674X7 775 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 TCEAL6Q6IPX3 200 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 NAPEPLDQ6IQ20 393 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 IL27RAQ6UWB1 636 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 BBS12Q6ZW61 710 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 TTC7BQ86TV6 843 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 FAM174AQ8TBP5 190 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 ASB12Q8WXK4 309 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 P3H4Q92791 437 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 TCEAL3Q969E4 200 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 FEM1CQ96JP0 617 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 ALS2CR12Q96Q35 445 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 SMOC1Q9H4F8 434 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 NT5MQ9NPB1 228 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 RBM22Q9NW64 420 aaKnown RBP eCLIP12.68□□□□□ -0.384e-11■■■■□ 26.1
VEGFA-225ENST00000523950 CAPN6Q9Y6Q1 641 aa12.68□□□□□ -0.38
VEGFA-225ENST00000523950 RIF1Q5UIP0 2472 aaKnown RBP12.67□□□□□ -0.38
VEGFA-225ENST00000523950 A0A0U1RQJ8 604 aa12.67□□□□□ -0.38
VEGFA-225ENST00000523950 CFAP69A5D8W1 941 aa12.67□□□□□ -0.38
VEGFA-225ENST00000523950 UPK3BL1B0FP48 263 aa12.67□□□□□ -0.38
VEGFA-225ENST00000523950 HACD1B0YJ81 288 aa12.67□□□□□ -0.38
VEGFA-225ENST00000523950 UPK3BL2E5RIL1 263 aa12.67□□□□□ -0.38
VEGFA-225ENST00000523950 PRAMEF26H0Y7S4 382 aa12.67□□□□□ -0.38
VEGFA-225ENST00000523950 APOC4-APOC2K7ER74 178 aa12.67□□□□□ -0.38
VEGFA-225ENST00000523950 NEMP1O14524 444 aa12.67□□□□□ -0.38
VEGFA-225ENST00000523950 TRAFD1O14545 582 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms