RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 OSBPL1AQ9BXW6 950 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 MIR1-1HGQ9H1L0 117 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 SUV39H2Q9H5I1 410 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 NOD2Q9HC29 1040 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 PARD6AQ9NPB6 346 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 MYLKQ15746 1914 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 BCLAF3A2AJT9 711 aaKnown RBP12.96□□□□□ -0.33
VEGFA-224ENST00000523873 LRRC72A6NJI9 287 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 PATE3B3GLJ2 98 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 H7C0C1 242 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 APOC4-APOC2K7ER74 178 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 ENC1O14682 589 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 SLC7A4O43246 635 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 SPINT1O43278 529 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 NEBLO76041 1014 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 APOC2P02655 101 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 IGHV4-34P06331 123 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 RETP07949 1114 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 TIMP2P16035 220 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 MAT2AP31153 395 aaKnown RBP12.96□□□□□ -0.33
VEGFA-224ENST00000523873 HSPA9P38646 679 aaKnown RBP12.96□□□□□ -0.33
VEGFA-224ENST00000523873 MPLP40238 635 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 CETN2P41208 172 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 ATP5OP48047 213 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 NR2C2P49116 596 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 IFI35P80217 286 aaPredicted RBP12.96□□□□□ -0.33
VEGFA-224ENST00000523873 NSUN2Q08J23 767 aaKnown RBP eCLIP12.96□□□□□ -0.33
VEGFA-224ENST00000523873 NIPAL4Q0D2K0 466 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 SFSWAPQ12872 951 aaKnown RBP12.96□□□□□ -0.33
VEGFA-224ENST00000523873 TRAF2Q12933 501 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 ZNF569Q5MCW4 686 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 SEL1L2Q5TEA6 688 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 TCEAL6Q6IPX3 200 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 ADAT2Q7Z6V5 191 aaKnown RBP12.96□□□□□ -0.33
VEGFA-224ENST00000523873 C17orf53Q8N3J3 647 aaPredicted RBP12.96□□□□□ -0.33
VEGFA-224ENST00000523873 TRIM58Q8NG06 486 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 OR2T34Q8NGX1 318 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 TFB1MQ8WVM0 346 aaKnown RBP12.96□□□□□ -0.33
VEGFA-224ENST00000523873 TCEAL3Q969E4 200 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 FATE1Q969F0 183 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 BIRC7Q96CA5 298 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 LOXL4Q96JB6 756 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 QKIQ96PU8 341 aaKnown RBP eCLIP12.96□□□□□ -0.33
VEGFA-224ENST00000523873 IL12RB2Q99665 862 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 HDAC8Q9BY41 377 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 CPEB1Q9BZB8 566 aaKnown RBP12.96□□□□□ -0.33
VEGFA-224ENST00000523873 EBF2Q9HAK2 575 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 FSCN3Q9NQT6 498 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 EIF2B4Q9UI10 523 aaKnown RBP12.96□□□□□ -0.33
VEGFA-224ENST00000523873 R3HDM2Q9Y2K5 976 aaKnown RBP12.96□□□□□ -0.33
VEGFA-224ENST00000523873 PCDHGC4Q9Y5F7 938 aa12.96□□□□□ -0.33
VEGFA-224ENST00000523873 F5H423 210 aaPredicted RBP12.95□□□□□ -0.34
VEGFA-224ENST00000523873 KCNK3O14649 394 aa12.95□□□□□ -0.34
VEGFA-224ENST00000523873 RNGTTO60942 597 aaKnown RBP12.95□□□□□ -0.34
VEGFA-224ENST00000523873 TJP3O95049 919 aa12.95□□□□□ -0.34
VEGFA-224ENST00000523873 PCDH8O95206 1070 aa12.95□□□□□ -0.34
VEGFA-224ENST00000523873 PTPN3P26045 913 aa12.95□□□□□ -0.34
VEGFA-224ENST00000523873 RBL1P28749 1068 aa12.95□□□□□ -0.34
VEGFA-224ENST00000523873 EIF3EP60228 445 aaKnown RBP12.95□□□□□ -0.34
VEGFA-224ENST00000523873 AP1S1P61966 158 aa12.95□□□□□ -0.34
VEGFA-224ENST00000523873 BCL2L1Q07817 233 aa12.95□□□□□ -0.34
VEGFA-224ENST00000523873 SEL1L3Q68CR1 1132 aa12.95□□□□□ -0.34
VEGFA-224ENST00000523873 ZCCHC9Q8N567 271 aaKnown RBP12.95□□□□□ -0.34
VEGFA-224ENST00000523873 PAF1Q8N7H5 531 aa12.95□□□□□ -0.34
VEGFA-224ENST00000523873 CADM4Q8NFZ8 388 aa12.95□□□□□ -0.34
VEGFA-224ENST00000523873 ARRDC2Q8TBH0 407 aa12.95□□□□□ -0.34
VEGFA-224ENST00000523873 PDCD6IPQ8WUM4 868 aaKnown RBP12.95□□□□□ -0.34
VEGFA-224ENST00000523873 RUBCNQ92622 972 aa12.95□□□□□ -0.34
VEGFA-224ENST00000523873 FOXJ1Q92949 421 aa12.95□□□□□ -0.34
VEGFA-224ENST00000523873 AGAP3Q96P47 875 aa12.95□□□□□ -0.34
VEGFA-224ENST00000523873 TUBGCP5Q96RT8 1024 aa12.95□□□□□ -0.34
VEGFA-224ENST00000523873 ORAI3Q9BRQ5 295 aa12.95□□□□□ -0.34
VEGFA-224ENST00000523873 POLR1EQ9GZS1 481 aaKnown RBP12.95□□□□□ -0.34
VEGFA-224ENST00000523873 ATP13A3Q9H7F0 1226 aa12.95□□□□□ -0.34
VEGFA-224ENST00000523873 PILRBQ9UKJ0 227 aa12.95□□□□□ -0.34
VEGFA-224ENST00000523873 EFR3BQ9Y2G0 817 aa12.95□□□□□ -0.34
VEGFA-224ENST00000523873 ATP8A1Q9Y2Q0 1164 aa12.95□□□□□ -0.34
VEGFA-224ENST00000523873 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.95□□□□□ -0.34
VEGFA-224ENST00000523873 FADS3Q9Y5Q0 445 aa12.95□□□□□ -0.34
VEGFA-224ENST00000523873 SCN8AQ9UQD0 1980 aa12.94□□□□□ -0.34
VEGFA-224ENST00000523873 A0A1W2PQU0 124 aa12.94□□□□□ -0.34
VEGFA-224ENST00000523873 TSPAN11A1L157 253 aa12.94□□□□□ -0.34
VEGFA-224ENST00000523873 C10orf142B7Z368 130 aa12.94□□□□□ -0.34
VEGFA-224ENST00000523873 TRAFD1O14545 582 aaPredicted RBP12.94□□□□□ -0.34
VEGFA-224ENST00000523873 WNT9AO14904 365 aa12.94□□□□□ -0.34
VEGFA-224ENST00000523873 MMP2P08253 660 aa12.94□□□□□ -0.34
VEGFA-224ENST00000523873 TGM1P22735 817 aa12.94□□□□□ -0.34
VEGFA-224ENST00000523873 SERPINA4P29622 427 aa12.94□□□□□ -0.34
VEGFA-224ENST00000523873 CXCR5P32302 372 aa12.94□□□□□ -0.34
VEGFA-224ENST00000523873 WASHC5Q12768 1159 aa12.94□□□□□ -0.34
VEGFA-224ENST00000523873 KLF1Q13351 362 aaPredicted RBP12.94□□□□□ -0.34
VEGFA-224ENST00000523873 GRM3Q14832 879 aa12.94□□□□□ -0.34
VEGFA-224ENST00000523873 PTPRRQ15256 657 aa12.94□□□□□ -0.34
VEGFA-224ENST00000523873 SF3A2Q15428 464 aaKnown RBP12.94□□□□□ -0.34
VEGFA-224ENST00000523873 SLC45A4Q5BKX6 768 aa12.94□□□□□ -0.34
VEGFA-224ENST00000523873 SPDYCQ5MJ68 293 aa12.94□□□□□ -0.34
VEGFA-224ENST00000523873 CFAP58Q5T655 872 aa12.94□□□□□ -0.34
VEGFA-224ENST00000523873 LAYNQ6UX15 382 aa12.94□□□□□ -0.34
VEGFA-224ENST00000523873 BZW1Q7L1Q6 419 aaKnown RBP12.94□□□□□ -0.34
VEGFA-224ENST00000523873 TTC7BQ86TV6 843 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms