RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 TTC7BQ86TV6 843 aa8.05□□□□□ -1.12
NSMCE2-213ENST00000523824 ZFAND4Q86XD8 727 aa8.05□□□□□ -1.12
NSMCE2-213ENST00000523824 GKN2Q86XP6 184 aa8.05□□□□□ -1.12
NSMCE2-213ENST00000523824 PLPP6Q8IY26 295 aa8.05□□□□□ -1.12
NSMCE2-213ENST00000523824 ZNF683Q8IZ20 524 aa8.05□□□□□ -1.12
NSMCE2-213ENST00000523824 Q8N9G6 341 aaPredicted RBP8.05□□□□□ -1.12
NSMCE2-213ENST00000523824 KYQ8NBH2 561 aa8.05□□□□□ -1.12
NSMCE2-213ENST00000523824 ZNF397Q8NF99 534 aaPredicted RBP8.05□□□□□ -1.12
NSMCE2-213ENST00000523824 OR6K2Q8NGY2 324 aa8.05□□□□□ -1.12
NSMCE2-213ENST00000523824 PCDH19Q8TAB3 1148 aa8.05□□□□□ -1.12
NSMCE2-213ENST00000523824 CXorf40AQ8TE69 158 aa8.05□□□□□ -1.12
NSMCE2-213ENST00000523824 TSACCQ96A04 125 aaPredicted RBP8.05□□□□□ -1.12
NSMCE2-213ENST00000523824 ISG20Q96AZ6 181 aaKnown RBP8.05□□□□□ -1.12
NSMCE2-213ENST00000523824 TMEM159Q96B96 161 aa8.05□□□□□ -1.12
NSMCE2-213ENST00000523824 FAM81BQ96LP2 452 aa8.05□□□□□ -1.12
NSMCE2-213ENST00000523824 KLHL32Q96NJ5 620 aa8.05□□□□□ -1.12
NSMCE2-213ENST00000523824 NPY6RQ99463 290 aa8.05□□□□□ -1.12
NSMCE2-213ENST00000523824 EDEM3Q9BZQ6 932 aa8.05□□□□□ -1.12
NSMCE2-213ENST00000523824 ANLNQ9NQW6 1124 aa8.05□□□□□ -1.12
NSMCE2-213ENST00000523824 MBNL1Q9NR56 388 aaKnown RBP8.05□□□□□ -1.12
NSMCE2-213ENST00000523824 TMEM51Q9NW97 253 aa8.05□□□□□ -1.12
NSMCE2-213ENST00000523824 GEMIN8Q9NWZ8 242 aaKnown RBP8.05□□□□□ -1.12
NSMCE2-213ENST00000523824 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.05□□□□□ -1.12
NSMCE2-213ENST00000523824 HOOK1Q9UJC3 728 aaKnown RBP8.05□□□□□ -1.12
NSMCE2-213ENST00000523824 PNMA8BQ9ULN7 279 aaPredicted RBP8.05□□□□□ -1.12
NSMCE2-213ENST00000523824 STAP1Q9ULZ2 295 aa8.05□□□□□ -1.12
NSMCE2-213ENST00000523824 PCDHGA4Q9Y5G9 962 aa8.05□□□□□ -1.12
NSMCE2-213ENST00000523824 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.05□□□□□ -1.12
NSMCE2-213ENST00000523824 ATP6V1DQ9Y5K8 247 aa8.05□□□□□ -1.12
NSMCE2-213ENST00000523824 TRPM6Q9BX84 2022 aa8.05□□□□□ -1.12
NSMCE2-213ENST00000523824 COL27A1Q8IZC6 1860 aaPredicted RBP8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 LRRK2Q5S007 2527 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 IGLV3-10A0A075B6K4 115 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 A0A1W2PQC6 194 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 A0A1W2PQM1 296 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 GOLGA6L4A6NEF3 574 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 TMEM110-MUSTN1A8MSY1 372 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 I6L893 689 aaPredicted RBP8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 RASGRP1O95267 797 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 POP4O95707 220 aaKnown RBP8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 UGT2B4P06133 528 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 GP1BBP13224 206 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 TFE3P19532 575 aaPredicted RBP8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 HTR1BP28222 390 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 KRT9P35527 623 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 PPP1R2P41236 205 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 PEX5P50542 639 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 SNRPD1P62314 119 aaKnown RBP8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 ARF5P84085 180 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 MORC3Q14149 939 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 CLCA4Q14CN2 919 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 KIF26BQ2KJY2 2108 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 KLHL40Q2TBA0 621 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 MYLK3Q32MK0 819 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 LRRC73Q5JTD7 316 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 TMEM164Q5U3C3 297 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 OTUD1Q5VV17 481 aaPredicted RBP8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 GJB7Q6PEY0 223 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 PTRH1Q86Y79 214 aaKnown RBP8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 ZDHHC17Q8IUH5 632 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 CCNJLQ8IV13 435 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 TRIM59Q8IWR1 403 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 DRC7Q8IY82 874 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 FMR1NBQ8N0W7 255 aaPredicted RBP8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 C1orf131Q8NDD1 294 aaKnown RBP8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 OR2AP1Q8NGE2 309 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 USP7Q93009 1102 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 PGAP3Q96FM1 320 aaPredicted RBP8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 HAPLN3Q96S86 360 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 TBCBQ99426 244 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 CMKLR1Q99788 373 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 EPAS1Q99814 870 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 OSBPL1AQ9BXW6 950 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 ZYG11BQ9C0D3 744 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 GDPD2Q9HCC8 539 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 TMPRSS4Q9NRS4 437 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 PLSCR2Q9NRY7 297 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 AKAP7Q9P0M2 348 aaPredicted RBP8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 HPCAL4Q9UM19 191 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 PCDHGC3Q9UN70 934 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 ACTL7AQ9Y615 435 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 RP1P56715 2156 aa8.04□□□□□ -1.12
NSMCE2-213ENST00000523824 AHCTF1Q8WYP5 2266 aa8.03□□□□□ -1.12
NSMCE2-213ENST00000523824 BICDL2A1A5D9 508 aa8.03□□□□□ -1.12
NSMCE2-213ENST00000523824 BECN2A8MW95 431 aa8.03□□□□□ -1.12
NSMCE2-213ENST00000523824 AREL1O15033 823 aa8.03□□□□□ -1.12
NSMCE2-213ENST00000523824 CD160O95971 181 aa8.03□□□□□ -1.12
NSMCE2-213ENST00000523824 GSRP00390 522 aa8.03□□□□□ -1.12
NSMCE2-213ENST00000523824 TNFP01375 233 aa8.03□□□□□ -1.12
NSMCE2-213ENST00000523824 WT1P19544 449 aaPredicted RBP8.03□□□□□ -1.12
NSMCE2-213ENST00000523824 ITIH2P19823 946 aa8.03□□□□□ -1.12
NSMCE2-213ENST00000523824 CD82P27701 267 aa8.03□□□□□ -1.12
NSMCE2-213ENST00000523824 ACVRL1P37023 503 aa8.03□□□□□ -1.12
NSMCE2-213ENST00000523824 ETFBP38117 255 aa8.03□□□□□ -1.12
NSMCE2-213ENST00000523824 ETV5P41161 510 aa8.03□□□□□ -1.12
NSMCE2-213ENST00000523824 GEMIN4P57678 1058 aaKnown RBP8.03□□□□□ -1.12
NSMCE2-213ENST00000523824 PTK2Q05397 1052 aa8.03□□□□□ -1.12
NSMCE2-213ENST00000523824 RAD51Q06609 339 aa8.03□□□□□ -1.12
NSMCE2-213ENST00000523824 ZFP36L1Q07352 338 aaKnown RBP8.03□□□□□ -1.12
NSMCE2-213ENST00000523824 ARHGEF7Q14155 803 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms