RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 CATSPERBQ9H7T0 1116 aa12.81□□□□□ -0.36
TOP1MT-217ENST00000523417 IPO11Q9UI26 975 aaKnown RBP12.81□□□□□ -0.36
TOP1MT-217ENST00000523417 CHD5Q8TDI0 1954 aa12.81□□□□□ -0.36
TOP1MT-217ENST00000523417 TRPM6Q9BX84 2022 aa12.81□□□□□ -0.36
TOP1MT-217ENST00000523417 FAM170AA1A519 330 aa12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 TSPAN11A1L157 253 aa12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 CFAP69A5D8W1 941 aa12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 RASA4BC9J798 803 aa12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 NEMP1O14524 444 aa12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 FFAR2O15552 330 aa12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 CCP110O43303 1012 aa12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 RASA4O43374 803 aa12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 BRINP1O60477 761 aa12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 TMCC1O94876 653 aa12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 FERP16591 822 aa12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 JUNDP17535 347 aa12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 CDK11BP21127 795 aaKnown RBP12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 NDST2P52849 883 aa12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 RPL7AP62424 266 aaKnown RBP12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 CYTH1Q15438 398 aa12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 ZNF542PQ5EBM4 170 aa12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 TPRG1LQ5T0D9 272 aa12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 DNAJC24Q6P3W2 148 aa12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 TMC6Q7Z403 805 aa12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 RYBPQ8N488 228 aaPredicted RBP12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 OR6K2Q8NGY2 324 aa12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 HIC2Q96JB3 615 aa12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 ZNF641Q96N77 438 aaPredicted RBP12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 BBC3Q96PG8 261 aaPredicted RBP12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 DEPDC7Q96QD5 511 aa12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 C1QTNF7Q9BXJ2 289 aa12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 KLC2Q9H0B6 622 aa12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 LRRC19Q9H756 370 aa12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 SPASTQ9UBP0 616 aa12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 GGT7Q9UJ14 662 aa12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 IGSF10Q6WRI0 2623 aa12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 NBEAQ8NFP9 2946 aa12.8□□□□□ -0.36
TOP1MT-217ENST00000523417 LMO7DNF2Z398 122 aa12.79□□□□□ -0.36
TOP1MT-217ENST00000523417 MMP20O60882 483 aa12.79□□□□□ -0.36
TOP1MT-217ENST00000523417 TM7SF2O76062 418 aa12.79□□□□□ -0.36
TOP1MT-217ENST00000523417 IGSF6O95976 241 aa12.79□□□□□ -0.36
TOP1MT-217ENST00000523417 GZMAP12544 262 aa12.79□□□□□ -0.36
TOP1MT-217ENST00000523417 ITPKBP27987 946 aa12.79□□□□□ -0.36
TOP1MT-217ENST00000523417 HCAR3P49019 387 aa12.79□□□□□ -0.36
TOP1MT-217ENST00000523417 ERVPABLB-1P60509 514 aa12.79□□□□□ -0.36
TOP1MT-217ENST00000523417 RHOAP61586 193 aa12.79□□□□□ -0.36
TOP1MT-217ENST00000523417 NSUN2Q08J23 767 aaKnown RBP eCLIP12.79□□□□□ -0.36
TOP1MT-217ENST00000523417 ELP6Q0PNE2 266 aa12.79□□□□□ -0.36
TOP1MT-217ENST00000523417 MAMLD1Q13495 774 aa12.79□□□□□ -0.36
TOP1MT-217ENST00000523417 STX1AQ16623 288 aa12.79□□□□□ -0.36
TOP1MT-217ENST00000523417 ATXN7L2Q5T6C5 722 aaPredicted RBP12.79□□□□□ -0.36
TOP1MT-217ENST00000523417 PLEKHA7Q6IQ23 1121 aa12.79□□□□□ -0.36
TOP1MT-217ENST00000523417 SCYL2Q6P3W7 929 aa12.79□□□□□ -0.36
TOP1MT-217ENST00000523417 LVRNQ6Q4G3 990 aa12.79□□□□□ -0.36
TOP1MT-217ENST00000523417 KDM7AQ6ZMT4 941 aa12.79□□□□□ -0.36
TOP1MT-217ENST00000523417 PSTKQ8IV42 348 aaKnown RBP12.79□□□□□ -0.36
TOP1MT-217ENST00000523417 TP53I13Q8NBR0 393 aaPredicted RBP12.79□□□□□ -0.36
TOP1MT-217ENST00000523417 WDR48Q8TAF3 677 aa12.79□□□□□ -0.36
TOP1MT-217ENST00000523417 HMCESQ96FZ2 354 aa12.79□□□□□ -0.36
TOP1MT-217ENST00000523417 TUBGCP5Q96RT8 1024 aa12.79□□□□□ -0.36
TOP1MT-217ENST00000523417 UBL7Q96S82 380 aaPredicted RBP12.79□□□□□ -0.36
TOP1MT-217ENST00000523417 ABCG4Q9H172 646 aa12.79□□□□□ -0.36
TOP1MT-217ENST00000523417 SUV39H2Q9H5I1 410 aa12.79□□□□□ -0.36
TOP1MT-217ENST00000523417 CAAP1Q9H8G2 361 aa12.79□□□□□ -0.36
TOP1MT-217ENST00000523417 PDFQ9HBH1 243 aa12.79□□□□□ -0.36
TOP1MT-217ENST00000523417 LHX3Q9UBR4 397 aa12.79□□□□□ -0.36
TOP1MT-217ENST00000523417 BAHCC1Q9P281 2608 aa12.79□□□□□ -0.36
TOP1MT-217ENST00000523417 PRAMEF11O60813 436 aa12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 GCATO75600 419 aa12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 TCEA3O75764 348 aa12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 NEBLO76041 1014 aa12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 ATP1A3P13637 1013 aa12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 DESP17661 470 aa12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 EIF4A3P38919 411 aaKnown RBP12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 RPIAP49247 311 aa12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 ZNF135P52742 658 aaPredicted RBP12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 UGP2Q16851 508 aa12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 ISXQ2M1V0 245 aa12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 ERMARDQ5T6L9 678 aa12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 AFMIDQ63HM1 303 aa12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 DCUN1D2Q6PH85 259 aa12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 BRAT1Q6PJG6 821 aa12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 LEKR1Q6ZMV7 388 aa12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 MACC1Q6ZN28 852 aa12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 DNAAF5Q86Y56 855 aa12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 ARFGAP1Q8N6T3 406 aa12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 IFI44Q8TCB0 444 aa12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 CXorf40AQ8TE69 158 aa12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 FNIP1Q8TF40 1166 aa12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 GLMNQ92990 594 aa12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 PCMTD1Q96MG8 357 aaPredicted RBP12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 DCBLD2Q96PD2 775 aa12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 MCEEQ96PE7 176 aa12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 GBP4Q96PP9 640 aa12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 IL12RB2Q99665 862 aa12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 POLR1BQ9H9Y6 1135 aa12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 MBNL1Q9NR56 388 aaKnown RBP12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 PARVAQ9NVD7 372 aa12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 AIPL1Q9NZN9 384 aa12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 PNMA8BQ9ULN7 279 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms