RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 TPRG1LQ5T0D9 272 aa18.91■□□□□ 0.62
SPIDR-220ENST00000522900 PTAR1Q7Z6K3 402 aaPredicted RBP18.91■□□□□ 0.62
SPIDR-220ENST00000522900 TSEN2Q8NCE0 465 aaKnown RBP18.91■□□□□ 0.62
SPIDR-220ENST00000522900 ZCCHC14Q8WYQ9 949 aaKnown RBP18.91■□□□□ 0.62
SPIDR-220ENST00000522900 HSPH1Q92598 858 aa18.91■□□□□ 0.62
SPIDR-220ENST00000522900 ZWILCHQ9H900 591 aa18.91■□□□□ 0.62
SPIDR-220ENST00000522900 GPR27Q9NS67 375 aa18.91■□□□□ 0.62
SPIDR-220ENST00000522900 ETNK2Q9NVF9 386 aa18.91■□□□□ 0.62
SPIDR-220ENST00000522900 DKK3Q9UBP4 350 aa18.91■□□□□ 0.62
SPIDR-220ENST00000522900 TP53BP1Q12888 1972 aaPredicted RBP18.91■□□□□ 0.62
SPIDR-220ENST00000522900 CYP1A2P05177 515 aa18.9■□□□□ 0.62
SPIDR-220ENST00000522900 GIMD1P0DJR0 217 aa18.9■□□□□ 0.62
SPIDR-220ENST00000522900 RARAP10276 462 aa18.9■□□□□ 0.62
SPIDR-220ENST00000522900 PTMSP20962 102 aa18.9■□□□□ 0.62
SPIDR-220ENST00000522900 AMPD1P23109 780 aa18.9■□□□□ 0.62
SPIDR-220ENST00000522900 ACADVLP49748 655 aa18.9■□□□□ 0.62
SPIDR-220ENST00000522900 FZD2Q14332 565 aa18.9■□□□□ 0.62
SPIDR-220ENST00000522900 ACAP1Q15027 740 aa18.9■□□□□ 0.62
SPIDR-220ENST00000522900 SMAD1Q15797 465 aaKnown RBP18.9■□□□□ 0.62
SPIDR-220ENST00000522900 BOLA3Q53S33 107 aa18.9■□□□□ 0.62
SPIDR-220ENST00000522900 CCDC122Q5T0U0 273 aa18.9■□□□□ 0.62
SPIDR-220ENST00000522900 ALKBH5Q6P6C2 394 aaKnown RBP18.9■□□□□ 0.62
SPIDR-220ENST00000522900 KYAT3Q6YP21 454 aaKnown RBP18.9■□□□□ 0.62
SPIDR-220ENST00000522900 ZSWIM9Q86XI8 627 aa18.9■□□□□ 0.62
SPIDR-220ENST00000522900 CAMK1DQ8IU85 385 aa18.9■□□□□ 0.62
SPIDR-220ENST00000522900 ASB12Q8WXK4 309 aa18.9■□□□□ 0.62
SPIDR-220ENST00000522900 CENPTQ96BT3 561 aa18.9■□□□□ 0.62
SPIDR-220ENST00000522900 NCAPGQ9BPX3 1015 aa18.9■□□□□ 0.62
SPIDR-220ENST00000522900 WRAP53Q9BUR4 548 aaKnown RBP18.9■□□□□ 0.62
SPIDR-220ENST00000522900 NUP85Q9BW27 656 aa18.9■□□□□ 0.62
SPIDR-220ENST00000522900 SUV39H2Q9H5I1 410 aa18.9■□□□□ 0.62
SPIDR-220ENST00000522900 ZZEF1O43149 2961 aa18.9■□□□□ 0.62
SPIDR-220ENST00000522900 SRRM3A6NNA2 597 aaPredicted RBP18.89■□□□□ 0.61
SPIDR-220ENST00000522900 FPGTO14772 594 aa18.89■□□□□ 0.61
SPIDR-220ENST00000522900 MUSKO15146 869 aa18.89■□□□□ 0.61
SPIDR-220ENST00000522900 SIGLEC6O43699 453 aa18.89■□□□□ 0.61
SPIDR-220ENST00000522900 PALMO75781 387 aa18.89■□□□□ 0.61
SPIDR-220ENST00000522900 PIAS2O75928 621 aa18.89■□□□□ 0.61
SPIDR-220ENST00000522900 SEMG2Q02383 582 aa18.89■□□□□ 0.61
SPIDR-220ENST00000522900 PIGHQ14442 188 aaPredicted RBP18.89■□□□□ 0.61
SPIDR-220ENST00000522900 DPYSL2Q16555 572 aa18.89■□□□□ 0.61
SPIDR-220ENST00000522900 PROX2Q3B8N5 592 aa18.89■□□□□ 0.61
SPIDR-220ENST00000522900 POLNQ7Z5Q5 900 aa18.89■□□□□ 0.61
SPIDR-220ENST00000522900 SRLQ86TD4 932 aa18.89■□□□□ 0.61
SPIDR-220ENST00000522900 VPS36Q86VN1 386 aa18.89■□□□□ 0.61
SPIDR-220ENST00000522900 CPNE8Q86YQ8 564 aa18.89■□□□□ 0.61
SPIDR-220ENST00000522900 FAM174AQ8TBP5 190 aa18.89■□□□□ 0.61
SPIDR-220ENST00000522900 IQCDQ96DY2 449 aa18.89■□□□□ 0.61
SPIDR-220ENST00000522900 NSMCE3Q96MG7 304 aa18.89■□□□□ 0.61
SPIDR-220ENST00000522900 MBNL1Q9NR56 388 aaKnown RBP18.89■□□□□ 0.61
SPIDR-220ENST00000522900 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.89■□□□□ 0.61
SPIDR-220ENST00000522900 DNAJC28Q9NX36 388 aa18.89■□□□□ 0.61
SPIDR-220ENST00000522900 KLF15Q9UIH9 416 aa18.89■□□□□ 0.61
SPIDR-220ENST00000522900 ANAPC7Q9UJX3 599 aa18.89■□□□□ 0.61
SPIDR-220ENST00000522900 NENFQ9UMX5 172 aa18.89■□□□□ 0.61
SPIDR-220ENST00000522900 PCDHGA1Q9Y5H4 931 aa18.89■□□□□ 0.61
SPIDR-220ENST00000522900 PLXNB3Q9ULL4 1909 aa18.88■□□□□ 0.61
SPIDR-220ENST00000522900 SPTY2D1-AS1A0A0U1RR47 76 aa18.88■□□□□ 0.61
SPIDR-220ENST00000522900 H3BRJ5 948 aa18.88■□□□□ 0.61
SPIDR-220ENST00000522900 FFAR2O15552 330 aa18.88■□□□□ 0.61
SPIDR-220ENST00000522900 RFPL3O75679 317 aa18.88■□□□□ 0.61
SPIDR-220ENST00000522900 PRKCGP05129 697 aa18.88■□□□□ 0.61
SPIDR-220ENST00000522900 CKMT2P17540 419 aa18.88■□□□□ 0.61
SPIDR-220ENST00000522900 EIF4A3P38919 411 aaKnown RBP18.88■□□□□ 0.61
SPIDR-220ENST00000522900 PFN3P60673 137 aa18.88■□□□□ 0.61
SPIDR-220ENST00000522900 CAMK2BQ13554 666 aa18.88■□□□□ 0.61
SPIDR-220ENST00000522900 PDE1CQ14123 709 aaPredicted RBP18.88■□□□□ 0.61
SPIDR-220ENST00000522900 SKOR2Q2VWA4 1001 aaPredicted RBP18.88■□□□□ 0.61
SPIDR-220ENST00000522900 ZSCAN30Q86W11 494 aa18.88■□□□□ 0.61
SPIDR-220ENST00000522900 DCP2Q8IU60 420 aaKnown RBP18.88■□□□□ 0.61
SPIDR-220ENST00000522900 GALNT15Q8N3T1 639 aa18.88■□□□□ 0.61
SPIDR-220ENST00000522900 NIPA2Q8N8Q9 360 aa18.88■□□□□ 0.61
SPIDR-220ENST00000522900 CXorf40AQ8TE69 158 aa18.88■□□□□ 0.61
SPIDR-220ENST00000522900 CSPG4P5Q96PW8 444 aa18.88■□□□□ 0.61
SPIDR-220ENST00000522900 SP110Q9HB58 689 aa18.88■□□□□ 0.61
SPIDR-220ENST00000522900 PCDH18Q9HCL0 1135 aa18.88■□□□□ 0.61
SPIDR-220ENST00000522900 PCDH12Q9NPG4 1184 aa18.88■□□□□ 0.61
SPIDR-220ENST00000522900 IP6K2Q9UHH9 426 aa18.88■□□□□ 0.61
SPIDR-220ENST00000522900 IPO11Q9UI26 975 aaKnown RBP18.88■□□□□ 0.61
SPIDR-220ENST00000522900 COQ6Q9Y2Z9 468 aa18.88■□□□□ 0.61
SPIDR-220ENST00000522900 COL5A1P20908 1838 aaPredicted RBP18.88■□□□□ 0.61
SPIDR-220ENST00000522900 ASPMQ8IZT6 3477 aa18.87■□□□□ 0.61
SPIDR-220ENST00000522900 TSPAN11A1L157 253 aa18.87■□□□□ 0.61
SPIDR-220ENST00000522900 TTC24A2A3L6 582 aaPredicted RBP18.87■□□□□ 0.61
SPIDR-220ENST00000522900 TM7SF2O76062 418 aa18.87■□□□□ 0.61
SPIDR-220ENST00000522900 MYF5P13349 255 aa18.87■□□□□ 0.61
SPIDR-220ENST00000522900 XPAP23025 273 aaPredicted RBP18.87■□□□□ 0.61
SPIDR-220ENST00000522900 HNRNPH3P31942 346 aaKnown RBP18.87■□□□□ 0.61
SPIDR-220ENST00000522900 IGFALSP35858 605 aa18.87■□□□□ 0.61
SPIDR-220ENST00000522900 RABIFP47224 123 aa18.87■□□□□ 0.61
SPIDR-220ENST00000522900 CSNK1DP48730 415 aa18.87■□□□□ 0.61
SPIDR-220ENST00000522900 ZNF135P52742 658 aaPredicted RBP18.87■□□□□ 0.61
SPIDR-220ENST00000522900 CACNA1BQ00975 2339 aa18.87■□□□□ 0.61
SPIDR-220ENST00000522900 SLC25A11Q02978 314 aaKnown RBP18.87■□□□□ 0.61
SPIDR-220ENST00000522900 IL10RBQ08334 325 aa18.87■□□□□ 0.61
SPIDR-220ENST00000522900 SLC10A7Q0GE19 358 aa18.87■□□□□ 0.61
SPIDR-220ENST00000522900 EIF2B5Q13144 721 aaKnown RBP18.87■□□□□ 0.61
SPIDR-220ENST00000522900 ZNF211Q13398 564 aaPredicted RBP18.87■□□□□ 0.61
SPIDR-220ENST00000522900 UGP2Q16851 508 aa18.87■□□□□ 0.61
SPIDR-220ENST00000522900 TMEM52BQ4KMG9 183 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms