RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 NPNTQ6UXI9 565 aa18.06■□□□□ 0.48
CLK4-211ENST00000522556 B4GALNT4Q76KP1 1039 aa18.06■□□□□ 0.48
CLK4-211ENST00000522556 ADAT2Q7Z6V5 191 aaKnown RBP18.06■□□□□ 0.48
CLK4-211ENST00000522556 PRPF39Q86UA1 669 aaKnown RBP18.06■□□□□ 0.48
CLK4-211ENST00000522556 TPCN2Q8NHX9 752 aa18.06■□□□□ 0.48
CLK4-211ENST00000522556 KRT35Q92764 455 aa18.06■□□□□ 0.48
CLK4-211ENST00000522556 RNF157Q96PX1 679 aa18.06■□□□□ 0.48
CLK4-211ENST00000522556 OSBPL1AQ9BXW6 950 aa18.06■□□□□ 0.48
CLK4-211ENST00000522556 CPEB1Q9BZB8 566 aaKnown RBP18.06■□□□□ 0.48
CLK4-211ENST00000522556 DNAAF2Q9NVR5 837 aaKnown RBP18.06■□□□□ 0.48
CLK4-211ENST00000522556 LCMT1Q9UIC8 334 aa18.06■□□□□ 0.48
CLK4-211ENST00000522556 ALG6Q9Y672 507 aa18.06■□□□□ 0.48
CLK4-211ENST00000522556 CACNA1AO00555 2505 aa18.06■□□□□ 0.48
CLK4-211ENST00000522556 VILLO15195 856 aa18.05■□□□□ 0.48
CLK4-211ENST00000522556 OPHN1O60890 802 aa18.05■□□□□ 0.48
CLK4-211ENST00000522556 CR2P20023 1033 aa18.05■□□□□ 0.48
CLK4-211ENST00000522556 SDHBP21912 280 aa18.05■□□□□ 0.48
CLK4-211ENST00000522556 CD38P28907 300 aa18.05■□□□□ 0.48
CLK4-211ENST00000522556 GARSP41250 739 aaKnown RBP18.05■□□□□ 0.48
CLK4-211ENST00000522556 FAM193AP78312 1265 aa18.05■□□□□ 0.48
CLK4-211ENST00000522556 IHHQ14623 411 aa18.05■□□□□ 0.48
CLK4-211ENST00000522556 TEAD4Q15561 434 aa18.05■□□□□ 0.48
CLK4-211ENST00000522556 PSAPL1Q6NUJ1 521 aa18.05■□□□□ 0.48
CLK4-211ENST00000522556 SPATS2Q86XZ4 545 aaKnown RBP18.05■□□□□ 0.48
CLK4-211ENST00000522556 TMEM145Q8NBT3 493 aa18.05■□□□□ 0.48
CLK4-211ENST00000522556 PSKH2Q96QS6 385 aa18.05■□□□□ 0.48
CLK4-211ENST00000522556 DTLQ9NZJ0 730 aa18.05■□□□□ 0.48
CLK4-211ENST00000522556 SEPT3Q9UH03 358 aa18.05■□□□□ 0.48
CLK4-211ENST00000522556 CNOT1A5YKK6 2376 aaKnown RBP18.04■□□□□ 0.48
CLK4-211ENST00000522556 A0A0A6YYK5 440 aaPredicted RBP18.04■□□□□ 0.48
CLK4-211ENST00000522556 TSPAN11A1L157 253 aa18.04■□□□□ 0.48
CLK4-211ENST00000522556 IGLON5A6NGN9 336 aa18.04■□□□□ 0.48
CLK4-211ENST00000522556 AP1G1O43747 822 aa18.04■□□□□ 0.48
CLK4-211ENST00000522556 SCNN1BP51168 640 aa18.04■□□□□ 0.48
CLK4-211ENST00000522556 NOVA1P51513 510 aaKnown RBP18.04■□□□□ 0.48
CLK4-211ENST00000522556 RAD51Q06609 339 aa18.04■□□□□ 0.48
CLK4-211ENST00000522556 ADCY2Q08462 1091 aa18.04■□□□□ 0.48
CLK4-211ENST00000522556 ZNF235Q14590 738 aa18.04■□□□□ 0.48
CLK4-211ENST00000522556 RFTN1Q14699 578 aaPredicted RBP18.04■□□□□ 0.48
CLK4-211ENST00000522556 PTPRRQ15256 657 aa18.04■□□□□ 0.48
CLK4-211ENST00000522556 SHBQ15464 509 aa18.04■□□□□ 0.48
CLK4-211ENST00000522556 SETMARQ53H47 684 aaPredicted RBP18.04■□□□□ 0.48
CLK4-211ENST00000522556 GCNT7Q6ZNI0 430 aa18.04■□□□□ 0.48
CLK4-211ENST00000522556 PIP4P1Q86T03 277 aa18.04■□□□□ 0.48
CLK4-211ENST00000522556 RHOT1Q8IXI2 618 aa18.04■□□□□ 0.48
CLK4-211ENST00000522556 ZNF599Q96NL3 588 aa18.04■□□□□ 0.48
CLK4-211ENST00000522556 MGME1Q9BQP7 344 aa18.04■□□□□ 0.48
CLK4-211ENST00000522556 WRAP53Q9BUR4 548 aaKnown RBP18.04■□□□□ 0.48
CLK4-211ENST00000522556 SUV39H2Q9H5I1 410 aa18.04■□□□□ 0.48
CLK4-211ENST00000522556 IMPACTQ9P2X3 320 aa18.04■□□□□ 0.48
CLK4-211ENST00000522556 DKK3Q9UBP4 350 aa18.04■□□□□ 0.48
CLK4-211ENST00000522556 TRAFD1O14545 582 aaPredicted RBP18.03■□□□□ 0.48
CLK4-211ENST00000522556 MMP20O60882 483 aa18.03■□□□□ 0.48
CLK4-211ENST00000522556 KCNK5O95279 499 aa18.03■□□□□ 0.48
CLK4-211ENST00000522556 KRT10P13645 584 aa18.03■□□□□ 0.48
CLK4-211ENST00000522556 SLC1A1P43005 524 aa18.03■□□□□ 0.48
CLK4-211ENST00000522556 MMP13P45452 471 aa18.03■□□□□ 0.48
CLK4-211ENST00000522556 CSNK1DP48730 415 aa18.03■□□□□ 0.48
CLK4-211ENST00000522556 VAV2P52735 878 aa18.03■□□□□ 0.48
CLK4-211ENST00000522556 C21orf59P57076 290 aa18.03■□□□□ 0.48
CLK4-211ENST00000522556 NXPH1P58417 271 aa18.03■□□□□ 0.48
CLK4-211ENST00000522556 DYNLT1P63172 113 aa18.03■□□□□ 0.48
CLK4-211ENST00000522556 LRRC38Q5VT99 294 aa18.03■□□□□ 0.48
CLK4-211ENST00000522556 SLC9A4Q6AI14 798 aa18.03■□□□□ 0.48
CLK4-211ENST00000522556 C11orf63Q6NUN7 778 aa18.03■□□□□ 0.48
CLK4-211ENST00000522556 NEK5Q6P3R8 708 aa18.03■□□□□ 0.48
CLK4-211ENST00000522556 TTC7BQ86TV6 843 aa18.03■□□□□ 0.48
CLK4-211ENST00000522556 MAP7D3Q8IWC1 876 aa18.03■□□□□ 0.48
CLK4-211ENST00000522556 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.03■□□□□ 0.48
CLK4-211ENST00000522556 LGMNQ99538 433 aa18.03■□□□□ 0.48
CLK4-211ENST00000522556 KLF6Q99612 283 aaPredicted RBP18.03■□□□□ 0.48
CLK4-211ENST00000522556 ZDHHC5Q9C0B5 715 aa18.03■□□□□ 0.48
CLK4-211ENST00000522556 NOD2Q9HC29 1040 aa18.03■□□□□ 0.48
CLK4-211ENST00000522556 NT5MQ9NPB1 228 aa18.03■□□□□ 0.48
CLK4-211ENST00000522556 PCDH12Q9NPG4 1184 aa18.03■□□□□ 0.48
CLK4-211ENST00000522556 TM7SF3Q9NS93 570 aa18.03■□□□□ 0.48
CLK4-211ENST00000522556 DMTF1Q9Y222 760 aa18.03■□□□□ 0.48
CLK4-211ENST00000522556 BTBD3Q9Y2F9 522 aa18.03■□□□□ 0.48
CLK4-211ENST00000522556 COQ6Q9Y2Z9 468 aa18.03■□□□□ 0.48
CLK4-211ENST00000522556 HEY1Q9Y5J3 304 aa18.03■□□□□ 0.48
CLK4-211ENST00000522556 POM121BA6NF01 834 aa18.02■□□□□ 0.48
CLK4-211ENST00000522556 UPK3BL1B0FP48 263 aa18.02■□□□□ 0.48
CLK4-211ENST00000522556 UPK3BL2E5RIL1 263 aa18.02■□□□□ 0.48
CLK4-211ENST00000522556 SH3BP5O60239 455 aa18.02■□□□□ 0.48
CLK4-211ENST00000522556 CER1O95813 267 aa18.02■□□□□ 0.48
CLK4-211ENST00000522556 PAK4O96013 591 aaPredicted RBP18.02■□□□□ 0.48
CLK4-211ENST00000522556 HNRNPA2B1P22626 353 aaKnown RBP18.02■□□□□ 0.48
CLK4-211ENST00000522556 CDKN2BP42772 138 aa18.02■□□□□ 0.48
CLK4-211ENST00000522556 TRAF2Q12933 501 aa18.02■□□□□ 0.48
CLK4-211ENST00000522556 RALGDSQ12967 914 aa18.02■□□□□ 0.48
CLK4-211ENST00000522556 ZNF423Q2M1K9 1284 aa18.02■□□□□ 0.48
CLK4-211ENST00000522556 TPRG1LQ5T0D9 272 aa18.02■□□□□ 0.48
CLK4-211ENST00000522556 KIAA1161Q6NSJ0 714 aa18.02■□□□□ 0.48
CLK4-211ENST00000522556 RFX6Q8HWS3 928 aa18.02■□□□□ 0.48
CLK4-211ENST00000522556 SLC22A18ASQ8N1D0 253 aa18.02■□□□□ 0.48
CLK4-211ENST00000522556 TEX26Q8N6G2 289 aa18.02■□□□□ 0.48
CLK4-211ENST00000522556 OR13H1Q8NG92 308 aa18.02■□□□□ 0.48
CLK4-211ENST00000522556 MAML1Q92585 1016 aa18.02■□□□□ 0.48
CLK4-211ENST00000522556 RAB7BQ96AH8 199 aa18.02■□□□□ 0.48
CLK4-211ENST00000522556 ECHDC3Q96DC8 303 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms