RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 CEP85LQ5SZL2 805 aa12.52□□□□□ -0.41
PABPC1-219ENST00000522387 IZUMO3Q5VZ72 239 aa12.52□□□□□ -0.41
PABPC1-219ENST00000522387 ZNF852Q6ZMS4 543 aa12.52□□□□□ -0.41
PABPC1-219ENST00000522387 NUDT18Q6ZVK8 323 aa12.52□□□□□ -0.41
PABPC1-219ENST00000522387 SPATS2Q86XZ4 545 aaKnown RBP12.52□□□□□ -0.41
PABPC1-219ENST00000522387 CAMK1DQ8IU85 385 aa12.52□□□□□ -0.41
PABPC1-219ENST00000522387 BBS5Q8N3I7 341 aa12.52□□□□□ -0.41
PABPC1-219ENST00000522387 TEX26Q8N6G2 289 aa12.52□□□□□ -0.41
PABPC1-219ENST00000522387 FBXO25Q8TCJ0 367 aa12.52□□□□□ -0.41
PABPC1-219ENST00000522387 UCMAQ8WVF2 138 aa12.52□□□□□ -0.41
PABPC1-219ENST00000522387 PTPRN2Q92932 1015 aa12.52□□□□□ -0.41
PABPC1-219ENST00000522387 SCUBE2Q9NQ36 999 aa12.52□□□□□ -0.41
PABPC1-219ENST00000522387 PAK5Q9P286 719 aa12.52□□□□□ -0.41
PABPC1-219ENST00000522387 ATP8A1Q9Y2Q0 1164 aa12.52□□□□□ -0.41
PABPC1-219ENST00000522387 KLF8O95600 359 aaPredicted RBP12.51□□□□□ -0.41
PABPC1-219ENST00000522387 PRKCGP05129 697 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 IVDP26440 423 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 CHRNA4P43681 627 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 CCNHP51946 323 aaPredicted RBP12.51□□□□□ -0.41
PABPC1-219ENST00000522387 ITGA8P53708 1063 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 DHX9Q08211 1270 aaKnown RBP12.51□□□□□ -0.41
PABPC1-219ENST00000522387 CUL1Q13616 776 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 PTK6Q13882 451 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 DMC1Q14565 340 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 KIAA1211LQ6NV74 962 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 PRPF39Q86UA1 669 aaKnown RBP12.51□□□□□ -0.41
PABPC1-219ENST00000522387 SLC25A41Q8N5S1 370 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 IL17RCQ8NAC3 791 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 OR2A12Q8NGT7 310 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 WFIKKN2Q8TEU8 576 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 FRS2Q8WU20 508 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 RTP4Q96DX8 246 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 UHRF1Q96T88 793 aaPredicted RBP12.51□□□□□ -0.41
PABPC1-219ENST00000522387 GBA3Q9H227 469 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 C2orf42Q9NWW7 574 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 CHKBQ9Y259 395 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 STON1Q9Y6Q2 735 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 SDK1Q7Z5N4 2213 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 ANKRD36A6QL64 1941 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 CCDC78A2IDD5 438 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 FAM170BA6NMN3 283 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 PLK4O00444 970 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 SIN3BO75182 1162 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 BANF1O75531 89 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 AGTP01019 485 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 DCNP07585 359 aaKnown RBP12.51□□□□□ -0.41
PABPC1-219ENST00000522387 MMP2P08253 660 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 PDHA1P08559 390 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 PIRTP0C851 137 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 MDH1P40925 334 aaKnown RBP12.51□□□□□ -0.41
PABPC1-219ENST00000522387 ZNF33AQ06730 810 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 CCINQ13939 588 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 GALNT3Q14435 633 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 FBXW10Q5XX13 1052 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 DUPD1Q68J44 220 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 STK40Q8N2I9 435 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 OTUD6BQ8N6M0 293 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 OR2AP1Q8NGE2 309 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 ARRDC2Q8TBH0 407 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 ZNF473Q8WTR7 871 aaKnown RBP12.51□□□□□ -0.41
PABPC1-219ENST00000522387 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.51□□□□□ -0.412e-6■■■■■ 54.4
PABPC1-219ENST00000522387 CPT1BQ92523 772 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 ZNF599Q96NL3 588 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 VAT1Q99536 393 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 MGME1Q9BQP7 344 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 MLPHQ9BV36 600 aaPredicted RBP12.51□□□□□ -0.41
PABPC1-219ENST00000522387 FSD1LQ9BXM9 530 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 TMBIM4Q9HC24 238 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 TRHDEQ9UKU6 1024 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 COL4A2P08572 1712 aa12.51□□□□□ -0.41
PABPC1-219ENST00000522387 GOLGA6L10A6NI86 522 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 BHMG1C9JSJ3 638 aaPredicted RBP12.5□□□□□ -0.41
PABPC1-219ENST00000522387 TMEM63AO94886 807 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 SLC4A1P02730 911 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 UGT2B4P06133 528 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 CTSLP07711 333 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 TPH1P17752 444 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 RECQLP46063 649 aaPredicted RBP12.5□□□□□ -0.41
PABPC1-219ENST00000522387 GEMIN4P57678 1058 aaKnown RBP12.5□□□□□ -0.41
PABPC1-219ENST00000522387 CRADDP78560 199 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 EIF4HQ15056 248 aaKnown RBP12.5□□□□□ -0.41
PABPC1-219ENST00000522387 SMAD1Q15797 465 aaKnown RBP12.5□□□□□ -0.41
PABPC1-219ENST00000522387 PREPLQ4J6C6 727 aaPredicted RBP12.5□□□□□ -0.41
PABPC1-219ENST00000522387 ARSIQ5FYB1 569 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 TJAP1Q5JTD0 557 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 LRIG3Q6UXM1 1119 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 MICALCLQ6ZW33 695 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 MMAAQ8IVH4 418 aaKnown RBP12.5□□□□□ -0.41
PABPC1-219ENST00000522387 UHMK1Q8TAS1 419 aaKnown RBP12.5□□□□□ -0.41
PABPC1-219ENST00000522387 SLCO2A1Q92959 643 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 RUNDC3BQ96NL0 473 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 FMO2Q99518 471 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 RAB17Q9H0T7 212 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 LMAN1LQ9HAT1 526 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 THAP10Q9P2Z0 257 aaPredicted RBP12.5□□□□□ -0.41
PABPC1-219ENST00000522387 SARDHQ9UL12 918 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 SLC8A2Q9UPR5 921 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 CAPN7Q9Y6W3 813 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 TP73O15350 636 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 ADAM23O75077 832 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms