RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 INSIG1O15503 277 aa16.01■□□□□ 0.15
CLN8-205ENST00000520991 PRPSAP2O60256 369 aa16.01■□□□□ 0.15
CLN8-205ENST00000520991 MMP20O60882 483 aa16.01■□□□□ 0.15
CLN8-205ENST00000520991 TM7SF2O76062 418 aa16.01■□□□□ 0.15
CLN8-205ENST00000520991 PIGNO95427 931 aa16.01■□□□□ 0.15
CLN8-205ENST00000520991 CSF2P04141 144 aa16.01■□□□□ 0.15
CLN8-205ENST00000520991 GZMAP12544 262 aa16.01■□□□□ 0.15
CLN8-205ENST00000520991 NME1P15531 152 aaKnown RBP16.01■□□□□ 0.15
CLN8-205ENST00000520991 PRKCIP41743 596 aa16.01■□□□□ 0.15
CLN8-205ENST00000520991 THOP1P52888 689 aa16.01■□□□□ 0.15
CLN8-205ENST00000520991 GRM3Q14832 879 aa16.01■□□□□ 0.15
CLN8-205ENST00000520991 CYTH1Q15438 398 aa16.01■□□□□ 0.15
CLN8-205ENST00000520991 CA9Q16790 459 aa16.01■□□□□ 0.15
CLN8-205ENST00000520991 CFAP58Q5T655 872 aa16.01■□□□□ 0.15
CLN8-205ENST00000520991 E4F1Q66K89 784 aaPredicted RBP16.01■□□□□ 0.15
CLN8-205ENST00000520991 ZNF548Q8NEK5 533 aaPredicted RBP16.01■□□□□ 0.15
CLN8-205ENST00000520991 VOPP1Q96AW1 172 aa16.01■□□□□ 0.15
CLN8-205ENST00000520991 TRIM11Q96F44 468 aa16.01■□□□□ 0.15
CLN8-205ENST00000520991 NAP1L5Q96NT1 182 aaPredicted RBP16.01■□□□□ 0.15
CLN8-205ENST00000520991 WRAP53Q9BUR4 548 aaKnown RBP16.01■□□□□ 0.15
CLN8-205ENST00000520991 SNRNP25Q9BV90 132 aaKnown RBP16.01■□□□□ 0.15
CLN8-205ENST00000520991 CNOT8Q9UFF9 292 aaKnown RBP16.01■□□□□ 0.15
CLN8-205ENST00000520991 CLCA2Q9UQC9 943 aa16.01■□□□□ 0.15
CLN8-205ENST00000520991 AK5Q9Y6K8 562 aa16.01■□□□□ 0.15
CLN8-205ENST00000520991 SCINQ9Y6U3 715 aa16.01■□□□□ 0.15
CLN8-205ENST00000520991 ITPR1Q14643 2758 aa16.01■□□□□ 0.15
CLN8-205ENST00000520991 ARID1BQ8NFD5 2236 aaPredicted RBP16.01■□□□□ 0.15
CLN8-205ENST00000520991 TDRD6O60522 2096 aaKnown RBP16.01■□□□□ 0.15
CLN8-205ENST00000520991 APC2O95996 2303 aa16■□□□□ 0.15
CLN8-205ENST00000520991 J3KR12 359 aa16■□□□□ 0.15
CLN8-205ENST00000520991 PRAMEF11O60813 436 aa16■□□□□ 0.15
CLN8-205ENST00000520991 NEBLO76041 1014 aa16■□□□□ 0.15
CLN8-205ENST00000520991 CKMT1AP12532 417 aa16■□□□□ 0.15
CLN8-205ENST00000520991 TIMP2P16035 220 aa16■□□□□ 0.15
CLN8-205ENST00000520991 JUNDP17535 347 aa16■□□□□ 0.15
CLN8-205ENST00000520991 SUOXP51687 545 aa16■□□□□ 0.15
CLN8-205ENST00000520991 PFN3P60673 137 aa16■□□□□ 0.15
CLN8-205ENST00000520991 TPM4P67936 248 aa16■□□□□ 0.15
CLN8-205ENST00000520991 INSM1Q01101 510 aaPredicted RBP16■□□□□ 0.15
CLN8-205ENST00000520991 PTK2BQ14289 1009 aa16■□□□□ 0.15
CLN8-205ENST00000520991 COL28A1Q2UY09 1125 aa16■□□□□ 0.15
CLN8-205ENST00000520991 PPP6R3Q5H9R7 873 aaPredicted RBP16■□□□□ 0.15
CLN8-205ENST00000520991 KDM7AQ6ZMT4 941 aa16■□□□□ 0.15
CLN8-205ENST00000520991 RFX8Q6ZV50 586 aa16■□□□□ 0.15
CLN8-205ENST00000520991 FNIP1Q8TF40 1166 aa16■□□□□ 0.15
CLN8-205ENST00000520991 HNRNPLLQ8WVV9 542 aaKnown RBP16■□□□□ 0.15
CLN8-205ENST00000520991 RFFLQ8WZ73 363 aa16■□□□□ 0.15
CLN8-205ENST00000520991 APOLD1Q96LR9 279 aa16■□□□□ 0.15
CLN8-205ENST00000520991 PEBP4Q96S96 227 aa16■□□□□ 0.15
CLN8-205ENST00000520991 KCTD15Q96SI1 283 aaPredicted RBP16■□□□□ 0.15
CLN8-205ENST00000520991 CPEB1Q9BZB8 566 aaKnown RBP16■□□□□ 0.15
CLN8-205ENST00000520991 TRIM7Q9C029 511 aa16■□□□□ 0.15
CLN8-205ENST00000520991 SLC39A8Q9C0K1 460 aa16■□□□□ 0.15
CLN8-205ENST00000520991 PDFQ9HBH1 243 aa16■□□□□ 0.15
CLN8-205ENST00000520991 MYO1AQ9UBC5 1043 aa16■□□□□ 0.15
CLN8-205ENST00000520991 ACACAQ13085 2346 aa16■□□□□ 0.15
CLN8-205ENST00000520991 ZFYVE26Q68DK2 2539 aa16■□□□□ 0.15
CLN8-205ENST00000520991 K7ESM1 405 aa15.99■□□□□ 0.15
CLN8-205ENST00000520991 DDX3XO00571 662 aaKnown RBP eCLIP15.99■□□□□ 0.155e-9■■■■□ 23.9
CLN8-205ENST00000520991 AQP9O43315 295 aa15.99■□□□□ 0.15
CLN8-205ENST00000520991 PALMO75781 387 aa15.99■□□□□ 0.15
CLN8-205ENST00000520991 GIMD1P0DJR0 217 aa15.99■□□□□ 0.15
CLN8-205ENST00000520991 SKILP12757 684 aa15.99■□□□□ 0.15
CLN8-205ENST00000520991 ITIH2P19823 946 aa15.99■□□□□ 0.15
CLN8-205ENST00000520991 MIPP30301 263 aa15.99■□□□□ 0.15
CLN8-205ENST00000520991 IGFALSP35858 605 aa15.99■□□□□ 0.15
CLN8-205ENST00000520991 PAPOLAP51003 745 aaKnown RBP15.99■□□□□ 0.15
CLN8-205ENST00000520991 DUSP3P51452 185 aaPredicted RBP15.99■□□□□ 0.15
CLN8-205ENST00000520991 SEMG2Q02383 582 aa15.99■□□□□ 0.15
CLN8-205ENST00000520991 ELP6Q0PNE2 266 aa15.99■□□□□ 0.15
CLN8-205ENST00000520991 KLHL40Q2TBA0 621 aa15.99■□□□□ 0.15
CLN8-205ENST00000520991 TDRD12Q587J7 1177 aaKnown RBP15.99■□□□□ 0.15
CLN8-205ENST00000520991 TPRG1LQ5T0D9 272 aa15.99■□□□□ 0.15
CLN8-205ENST00000520991 ARFGAP1Q8N6T3 406 aa15.99■□□□□ 0.15
CLN8-205ENST00000520991 LMX1AQ8TE12 382 aa15.99■□□□□ 0.15
CLN8-205ENST00000520991 BTN2A2Q8WVV5 523 aa15.99■□□□□ 0.15
CLN8-205ENST00000520991 CENPTQ96BT3 561 aa15.99■□□□□ 0.15
CLN8-205ENST00000520991 DCBLD2Q96PD2 775 aa15.99■□□□□ 0.15
CLN8-205ENST00000520991 EDEM3Q9BZQ6 932 aa15.99■□□□□ 0.15
CLN8-205ENST00000520991 NRSN2Q9GZP1 204 aa15.99■□□□□ 0.15
CLN8-205ENST00000520991 SUV39H2Q9H5I1 410 aa15.99■□□□□ 0.15
CLN8-205ENST00000520991 SP110Q9HB58 689 aa15.99■□□□□ 0.15
CLN8-205ENST00000520991 USP29Q9HBJ7 922 aa15.99■□□□□ 0.15
CLN8-205ENST00000520991 MRPL47Q9HD33 250 aaKnown RBP15.99■□□□□ 0.15
CLN8-205ENST00000520991 CSNK1G3Q9Y6M4 447 aa15.99■□□□□ 0.15
CLN8-205ENST00000520991 DFFAO00273 331 aa15.98■□□□□ 0.15
CLN8-205ENST00000520991 MT-CO3P00414 261 aa15.98■□□□□ 0.15
CLN8-205ENST00000520991 MYBL1P10243 752 aa15.98■□□□□ 0.15
CLN8-205ENST00000520991 MYF5P13349 255 aa15.98■□□□□ 0.15
CLN8-205ENST00000520991 ERCC2P18074 760 aa15.98■□□□□ 0.15
CLN8-205ENST00000520991 YPEL5P62699 121 aa15.98■□□□□ 0.15
CLN8-205ENST00000520991 IQCB1Q15051 598 aa15.98■□□□□ 0.15
CLN8-205ENST00000520991 ZCCHC8Q6NZY4 707 aaKnown RBP15.98■□□□□ 0.15
CLN8-205ENST00000520991 ERAP2Q6P179 960 aa15.98■□□□□ 0.15
CLN8-205ENST00000520991 PSTKQ8IV42 348 aaKnown RBP15.98■□□□□ 0.15
CLN8-205ENST00000520991 CACTIN-AS1Q8N1I8 211 aa15.98■□□□□ 0.15
CLN8-205ENST00000520991 PAF1Q8N7H5 531 aa15.98■□□□□ 0.15
CLN8-205ENST00000520991 DCBLD1Q8N8Z6 715 aa15.98■□□□□ 0.15
CLN8-205ENST00000520991 FAM181AQ8N9Y4 354 aa15.98■□□□□ 0.15
CLN8-205ENST00000520991 HCAR2Q8TDS4 363 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms