RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 BZW1Q7L1Q6 419 aaKnown RBP18.39■□□□□ 0.53
VEGFA-222ENST00000520948 ZCCHC9Q8N567 271 aaKnown RBP18.39■□□□□ 0.53
VEGFA-222ENST00000520948 CHST14Q8NCH0 376 aa18.39■□□□□ 0.53
VEGFA-222ENST00000520948 TMIEQ8NEW7 156 aa18.39■□□□□ 0.53
VEGFA-222ENST00000520948 LRRN4Q8WUT4 740 aa18.39■□□□□ 0.53
VEGFA-222ENST00000520948 OR8D1Q8WZ84 308 aa18.39■□□□□ 0.53
VEGFA-222ENST00000520948 PRCCQ92733 491 aaPredicted RBP18.39■□□□□ 0.53
VEGFA-222ENST00000520948 P3H4Q92791 437 aa18.39■□□□□ 0.53
VEGFA-222ENST00000520948 FOXJ1Q92949 421 aa18.39■□□□□ 0.53
VEGFA-222ENST00000520948 SIPA1Q96FS4 1042 aa18.39■□□□□ 0.53
VEGFA-222ENST00000520948 PSKH2Q96QS6 385 aa18.39■□□□□ 0.53
VEGFA-222ENST00000520948 LGMNQ99538 433 aa18.39■□□□□ 0.53
VEGFA-222ENST00000520948 BRD8Q9H0E9 1235 aa18.39■□□□□ 0.53
VEGFA-222ENST00000520948 MIR1-1HGQ9H1L0 117 aa18.39■□□□□ 0.53
VEGFA-222ENST00000520948 CARD9Q9H257 536 aa18.39■□□□□ 0.53
VEGFA-222ENST00000520948 USP36Q9P275 1121 aaKnown RBP18.39■□□□□ 0.53
VEGFA-222ENST00000520948 SARDHQ9UL12 918 aa18.39■□□□□ 0.53
VEGFA-222ENST00000520948 WASF2Q9Y6W5 498 aa18.39■□□□□ 0.53
VEGFA-222ENST00000520948 RNF103O00237 685 aa18.38■□□□□ 0.53
VEGFA-222ENST00000520948 MUSKO15146 869 aa18.38■□□□□ 0.53
VEGFA-222ENST00000520948 IGLV3-19P01714 112 aa18.38■□□□□ 0.53
VEGFA-222ENST00000520948 CHRNA3P32297 505 aa18.38■□□□□ 0.53
VEGFA-222ENST00000520948 SNRPD1P62314 119 aaKnown RBP18.38■□□□□ 0.53
VEGFA-222ENST00000520948 TRIP6Q15654 476 aaKnown RBP18.38■□□□□ 0.53
VEGFA-222ENST00000520948 CST6Q15828 149 aa18.38■□□□□ 0.53
VEGFA-222ENST00000520948 MYLK3Q32MK0 819 aa18.38■□□□□ 0.53
VEGFA-222ENST00000520948 TIGD7Q6NT04 549 aaPredicted RBP18.38■□□□□ 0.53
VEGFA-222ENST00000520948 RAB44Q7Z6P3 723 aaPredicted RBP18.38■□□□□ 0.53
VEGFA-222ENST00000520948 MMAAQ8IVH4 418 aaKnown RBP18.38■□□□□ 0.53
VEGFA-222ENST00000520948 NAXDQ8IW45 347 aa18.38■□□□□ 0.53
VEGFA-222ENST00000520948 PGBD5Q8N414 524 aa18.38■□□□□ 0.53
VEGFA-222ENST00000520948 PNPLA1Q8N8W4 532 aa18.38■□□□□ 0.53
VEGFA-222ENST00000520948 TSEN2Q8NCE0 465 aaKnown RBP18.38■□□□□ 0.53
VEGFA-222ENST00000520948 CCDC114Q96M63 670 aa18.38■□□□□ 0.53
VEGFA-222ENST00000520948 HEPHQ9BQS7 1158 aa18.38■□□□□ 0.53
VEGFA-222ENST00000520948 TM6SF2Q9BZW4 377 aa18.38■□□□□ 0.53
VEGFA-222ENST00000520948 WSB2Q9NYS7 404 aaPredicted RBP18.38■□□□□ 0.53
VEGFA-222ENST00000520948 SCML1Q9UN30 329 aa18.38■□□□□ 0.53
VEGFA-222ENST00000520948 PCDHB9Q9Y5E1 797 aa18.38■□□□□ 0.53
VEGFA-222ENST00000520948 CACNA1GO43497 2377 aa18.37■□□□□ 0.53
VEGFA-222ENST00000520948 KIF5CO60282 957 aa18.37■□□□□ 0.53
VEGFA-222ENST00000520948 RNASEH1O60930 286 aaKnown RBP18.37■□□□□ 0.53
VEGFA-222ENST00000520948 TJP3O95049 919 aa18.37■□□□□ 0.53
VEGFA-222ENST00000520948 POP4O95707 220 aaKnown RBP18.37■□□□□ 0.53
VEGFA-222ENST00000520948 CR2P20023 1033 aa18.37■□□□□ 0.53
VEGFA-222ENST00000520948 RGRP47804 291 aa18.37■□□□□ 0.53
VEGFA-222ENST00000520948 DNA2P51530 1060 aa18.37■□□□□ 0.53
VEGFA-222ENST00000520948 TPMTP51580 245 aa18.37■□□□□ 0.53
VEGFA-222ENST00000520948 CCNHP51946 323 aaPredicted RBP18.37■□□□□ 0.53
VEGFA-222ENST00000520948 RHOAP61586 193 aa18.37■□□□□ 0.53
VEGFA-222ENST00000520948 XRCC4Q13426 336 aa18.37■□□□□ 0.53
VEGFA-222ENST00000520948 PRKD1Q15139 912 aaPredicted RBP18.37■□□□□ 0.53
VEGFA-222ENST00000520948 NOMO1Q15155 1222 aa18.37■□□□□ 0.53
VEGFA-222ENST00000520948 ZNF423Q2M1K9 1284 aa18.37■□□□□ 0.53
VEGFA-222ENST00000520948 HS1BP3Q53T59 392 aa18.37■□□□□ 0.53
VEGFA-222ENST00000520948 ATXN7L2Q5T6C5 722 aaPredicted RBP18.37■□□□□ 0.53
VEGFA-222ENST00000520948 MARC1Q5VT66 337 aa18.37■□□□□ 0.53
VEGFA-222ENST00000520948 CCDC13Q8IYE1 715 aa18.37■□□□□ 0.53
VEGFA-222ENST00000520948 CCNYQ8ND76 341 aa18.37■□□□□ 0.53
VEGFA-222ENST00000520948 FAM131CQ96AQ9 280 aa18.37■□□□□ 0.53
VEGFA-222ENST00000520948 LRIG1Q96JA1 1093 aa18.37■□□□□ 0.53
VEGFA-222ENST00000520948 IL12RB2Q99665 862 aa18.37■□□□□ 0.53
VEGFA-222ENST00000520948 CPEB1Q9BZB8 566 aaKnown RBP18.37■□□□□ 0.53
VEGFA-222ENST00000520948 IL21RQ9HBE5 538 aa18.37■□□□□ 0.53
VEGFA-222ENST00000520948 SEPT3Q9UH03 358 aa18.37■□□□□ 0.53
VEGFA-222ENST00000520948 FARP1Q9Y4F1 1045 aaPredicted RBP18.37■□□□□ 0.53
VEGFA-222ENST00000520948 A0A1B0GTW7 788 aa18.36■□□□□ 0.53
VEGFA-222ENST00000520948 TCRBV7S2A1N4TA0A589 114 aa18.36■□□□□ 0.53
VEGFA-222ENST00000520948 KCNK3O14649 394 aa18.36■□□□□ 0.53
VEGFA-222ENST00000520948 ENC1O14682 589 aa18.36■□□□□ 0.53
VEGFA-222ENST00000520948 BNIP3LO60238 219 aa18.36■□□□□ 0.53
VEGFA-222ENST00000520948 FTH1P19P0C7X4 201 aa18.36■□□□□ 0.53
VEGFA-222ENST00000520948 CCNB1P14635 433 aa18.36■□□□□ 0.53
VEGFA-222ENST00000520948 C5AR1P21730 350 aa18.36■□□□□ 0.53
VEGFA-222ENST00000520948 SLC8A1P32418 973 aa18.36■□□□□ 0.53
VEGFA-222ENST00000520948 RECQLP46063 649 aaPredicted RBP18.36■□□□□ 0.53
VEGFA-222ENST00000520948 RENBPP51606 427 aa18.36■□□□□ 0.53
VEGFA-222ENST00000520948 METAP1P53582 386 aa18.36■□□□□ 0.53
VEGFA-222ENST00000520948 OTUD4Q01804 1114 aaKnown RBP18.36■□□□□ 0.53
VEGFA-222ENST00000520948 SLC14A1Q13336 389 aa18.36■□□□□ 0.53
VEGFA-222ENST00000520948 COL9A2Q14055 689 aaPredicted RBP18.36■□□□□ 0.53
VEGFA-222ENST00000520948 ARSIQ5FYB1 569 aa18.36■□□□□ 0.53
VEGFA-222ENST00000520948 DSG4Q86SJ6 1040 aa18.36■□□□□ 0.53
VEGFA-222ENST00000520948 PIP4K2CQ8TBX8 421 aa18.36■□□□□ 0.53
VEGFA-222ENST00000520948 ACTL9Q8TC94 416 aa18.36■□□□□ 0.53
VEGFA-222ENST00000520948 DNASE2BQ8WZ79 361 aa18.36■□□□□ 0.53
VEGFA-222ENST00000520948 NSMCE3Q96MG7 304 aa18.36■□□□□ 0.53
VEGFA-222ENST00000520948 GDAP1L1Q96MZ0 367 aa18.36■□□□□ 0.53
VEGFA-222ENST00000520948 PABPC3Q9H361 631 aaKnown RBP18.36■□□□□ 0.53
VEGFA-222ENST00000520948 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.36■□□□□ 0.53
VEGFA-222ENST00000520948 IL36AQ9UHA7 158 aa18.36■□□□□ 0.53
VEGFA-222ENST00000520948 AMACRQ9UHK6 382 aa18.36■□□□□ 0.53
VEGFA-222ENST00000520948 LHX6Q9UPM6 363 aa18.36■□□□□ 0.53
VEGFA-222ENST00000520948 HACD1B0YJ81 288 aa18.35■□□□□ 0.53
VEGFA-222ENST00000520948 PPP1R12AO14974 1030 aaPredicted RBP18.35■□□□□ 0.53
VEGFA-222ENST00000520948 MID1O15344 667 aa18.35■□□□□ 0.53
VEGFA-222ENST00000520948 INSIG1O15503 277 aa18.35■□□□□ 0.53
VEGFA-222ENST00000520948 LEFTY1O75610 366 aa18.35■□□□□ 0.53
VEGFA-222ENST00000520948 IGSF6O95976 241 aa18.35■□□□□ 0.53
VEGFA-222ENST00000520948 ADH1BP00325 375 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms