RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 TMEFF1Q8IYR6 380 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 RTL3Q8N8U3 475 aaKnown RBP7.71□□□□□ -1.18
SDCBP-206ENST00000519115 NETO2Q8NC67 525 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 AENQ8WTP8 325 aaKnown RBP7.71□□□□□ -1.18
SDCBP-206ENST00000519115 TFB1MQ8WVM0 346 aaKnown RBP7.71□□□□□ -1.18
SDCBP-206ENST00000519115 C1orf54Q8WWF1 131 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 PRCCQ92733 491 aaPredicted RBP7.71□□□□□ -1.18
SDCBP-206ENST00000519115 HDAC11Q96DB2 347 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 HMCESQ96FZ2 354 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 SNF8Q96H20 258 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 RHOXF2Q9BQY4 288 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 SMOC1Q9H4F8 434 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 NOL6Q9H6R4 1146 aaKnown RBP7.71□□□□□ -1.18
SDCBP-206ENST00000519115 SLC24A3Q9HC58 644 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 ZDHHC18Q9NUE0 388 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 KLHL11Q9NVR0 708 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 HAUS2Q9NVX0 235 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 DTLQ9NZJ0 730 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 USP36Q9P275 1121 aaKnown RBP7.71□□□□□ -1.18
SDCBP-206ENST00000519115 MTRF1LQ9UGC7 380 aaKnown RBP7.71□□□□□ -1.18
SDCBP-206ENST00000519115 SUN2Q9UH99 717 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 SHOC2Q9UQ13 582 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 CFAP54Q96N23 3096 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 USP34Q70CQ2 3546 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 ATXN2Q99700 1313 aaKnown RBP7.71□□□□□ -1.18
SDCBP-206ENST00000519115 TRPM6Q9BX84 2022 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 RASA4BC9J798 803 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 PLK4O00444 970 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 MAP2K7O14733 419 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 MID1O15344 667 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 PSMD3O43242 534 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 RASA4O43374 803 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 ATP9BO43861 1147 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 NDUFS2O75306 463 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 PPFIA2O75334 1257 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 ZNF217O75362 1048 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 ZMPSTE24O75844 475 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 RHOBTB1O94844 696 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 SEC31AO94979 1220 aaKnown RBP7.7□□□□□ -1.18
SDCBP-206ENST00000519115 KRT14P02533 472 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 FDFT1P37268 417 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 PTGER3P43115 390 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 SERPINH1P50454 418 aaKnown RBP7.7□□□□□ -1.18
SDCBP-206ENST00000519115 METAP1P53582 386 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 SARNPP82979 210 aaKnown RBP7.7□□□□□ -1.18
SDCBP-206ENST00000519115 ARF5P84085 180 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 CREB5Q02930 508 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 PPIDQ08752 370 aaKnown RBP7.7□□□□□ -1.18
SDCBP-206ENST00000519115 SPEM2Q0P670 501 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 GALNT2Q10471 571 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 HNRNPDQ14103 355 aaKnown RBP7.7□□□□□ -1.18
SDCBP-206ENST00000519115 POLD3Q15054 466 aaPredicted RBP7.7□□□□□ -1.18
SDCBP-206ENST00000519115 PRKD1Q15139 912 aaPredicted RBP7.7□□□□□ -1.18
SDCBP-206ENST00000519115 POM121L1PQ3SYA9 428 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 PARP15Q460N3 678 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 TTC31Q49AM3 519 aaPredicted RBP7.7□□□□□ -1.18
SDCBP-206ENST00000519115 KAZNQ674X7 775 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 NCBP2-AS2Q69YL0 99 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 TIGD7Q6NT04 549 aaPredicted RBP7.7□□□□□ -1.18
SDCBP-206ENST00000519115 C22orf39Q6P5X5 142 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 DARS2Q6PI48 645 aaKnown RBP7.7□□□□□ -1.18
SDCBP-206ENST00000519115 PPP1R21Q6ZMI0 780 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 CYS1Q717R9 158 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 LPCAT2Q7L5N7 544 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 GSTA5Q7RTV2 222 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 CYP2U1Q7Z449 544 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 KLHDC8BQ8IXV7 354 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 SH2D3CQ8N5H7 860 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 ATP11CQ8NB49 1132 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 KDM1BQ8NB78 822 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 MCUQ8NE86 351 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 GANCQ8TET4 914 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 FRS2Q8WU20 508 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 PTPRN2Q92932 1015 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 ARHGEF2Q92974 986 aaKnown RBP7.7□□□□□ -1.18
SDCBP-206ENST00000519115 LRRC39Q96DD0 335 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 CELF6Q96J87 481 aaKnown RBP7.7□□□□□ -1.18
SDCBP-206ENST00000519115 ZC3H10Q96K80 434 aaKnown RBP7.7□□□□□ -1.18
SDCBP-206ENST00000519115 ZNF599Q96NL3 588 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 QKIQ96PU8 341 aaKnown RBP eCLIP7.7□□□□□ -1.18
SDCBP-206ENST00000519115 HERPUD2Q9BSE4 406 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 KLC2Q9H0B6 622 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 RSPH9Q9H1X1 276 aaPredicted RBP7.7□□□□□ -1.18
SDCBP-206ENST00000519115 MAGEH1Q9H213 219 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 ARRDC1-AS1Q9H2J1 176 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 TNKS2Q9H2K2 1166 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 ACBD3Q9H3P7 528 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 FBRSQ9HAH7 460 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 PARD6AQ9NPB6 346 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 SMARCAL1Q9NZC9 954 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 SERGEFQ9UGK8 458 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 TPX2Q9ULW0 747 aaKnown RBP7.7□□□□□ -1.18
SDCBP-206ENST00000519115 HS3ST2Q9Y278 367 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 R3HDM2Q9Y2K5 976 aaKnown RBP7.7□□□□□ -1.18
SDCBP-206ENST00000519115 FCF1Q9Y324 198 aaKnown RBP7.7□□□□□ -1.18
SDCBP-206ENST00000519115 MFHAS1Q9Y4C4 1052 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 SPTBN4Q9H254 2564 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 TMEM131Q92545 1883 aa7.7□□□□□ -1.18
SDCBP-206ENST00000519115 A0A1W2PP55 124 aa7.69□□□□□ -1.18
SDCBP-206ENST00000519115 H7C0C1 242 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms