RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 PTPRSQ13332 1948 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 ATP8B3O60423 1300 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 hCG_1807616A0A1W2PRN6 198 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 F5H0A9 414 aaPredicted RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 CLDN5O00501 218 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 FGF10O15520 208 aaPredicted RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 PTP4A3O75365 173 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 KRT37O76014 449 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 GUCA1CO95843 209 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 C1RP00736 705 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 SERPINC1P01008 464 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 RHOP08100 348 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 GSTM1P09488 218 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 HAPLN1P10915 354 aaPredicted RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 CCDC130P13994 396 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 IL9P15248 144 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 CD19P15391 556 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 PTPN2P17706 415 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 ALOX12P18054 663 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 TBXAS1P24557 533 aaPredicted RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 ANXA13P27216 316 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 ADORA2BP29275 332 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 MC4RP32245 332 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 SERPINF1P36955 418 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 GPR15P49685 360 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 OXCT1P55809 520 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 RPL10AP62906 217 aaKnown RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 NTHL1P78549 312 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 UBXN1Q04323 297 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 PLD1Q13393 1074 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 KRT31Q15323 416 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 MAN2A1Q16706 1144 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 ARHGAP44Q17R89 818 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 CCDC142Q17RM4 750 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 FILIP1LQ4L180 1135 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 PABPC1LQ4VXU2 614 aaKnown RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 FAM171BQ6P995 826 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 GJB7Q6PEY0 223 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 C16orf87Q6PH81 154 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 TRIM65Q6PJ69 517 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 CNSTQ6PJW8 725 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 TMEM270Q6UE05 265 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 B4GALNT4Q76KP1 1039 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 LIMS2Q7Z4I7 341 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 GPR149Q86SP6 731 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 ITIH5Q86UX2 942 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 LUZP1Q86V48 1076 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 TSPYL5Q86VY4 417 aaPredicted RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 UNC93AQ86WB7 457 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 ARHGEF19Q8IW93 802 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 DHX40Q8IX18 779 aaKnown RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 TTC39CQ8N584 583 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 CISD2Q8N5K1 135 aaKnown RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 C12orf29Q8N999 325 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 TMEM52Q8NDY8 209 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 Q8NFD4 153 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 MYCBPAPQ8TBZ2 947 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 SPATA18Q8TC71 538 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 SPPL2BQ8TCT7 592 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 SLC2A14Q8TDB8 520 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 C2orf15Q8WU43 125 aaKnown RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 ING5Q8WYH8 240 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 RFFLQ8WZ73 363 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 KAT5Q92993 513 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 MYLPFQ96A32 169 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 ZNF707Q96C28 371 aaPredicted RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 PCED1BQ96HM7 432 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 TMEM176AQ96HP8 235 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 NECTIN4Q96NY8 510 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 KCNC2Q96PR1 638 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 GCNAQ96QF7 691 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 BPIFA3Q9BQP9 254 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 PHF7Q9BWX1 381 aaPredicted RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 POMKQ9H5K3 350 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 SLITRK6Q9H5Y7 841 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 IPPKQ9H8X2 491 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 ZMAT3Q9HA38 289 aaKnown RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 CCDC177Q9NQR7 707 aaPredicted RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 ASAH2Q9NR71 780 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 KRT84Q9NSB2 600 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 FAM49BQ9NUQ9 324 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 DNMT3BQ9UBC3 853 aaKnown RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 HMGXB4Q9UGU5 601 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 RPS6KA6Q9UK32 745 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 ARHGAP26Q9UNA1 814 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 EDARQ9UNE0 448 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 C19orf53Q9UNZ5 99 aaPredicted RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 SIK3Q9Y2K2 1263 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 COQ4Q9Y3A0 265 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 NR2E1Q9Y466 385 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 YIPF1Q9Y548 306 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 GPR45Q9Y5Y3 372 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 ATP23Q9Y6H3 246 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 COL6A3P12111 3177 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 FNDC1Q4ZHG4 1894 aaPredicted RBP2.86□□□□□ -1.95
SKP1-204ENST00000517691 EYSQ5T1H1 3165 aa2.85□□□□□ -1.95
SKP1-204ENST00000517691 CLUHO75153 1309 aa2.85□□□□□ -1.95
SKP1-204ENST00000517691 A0A0C4DFX4 3053 aa2.85□□□□□ -1.95
SKP1-204ENST00000517691 MYH11P35749 1972 aa2.85□□□□□ -1.95
SKP1-204ENST00000517691 TMEM82A0PJX8 343 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms