RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 CCNJLQ8IV13 435 aa11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 HSCBQ8IWL3 235 aa11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 RYBPQ8N488 228 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 ZNF397Q8NF99 534 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 ATL2Q8NHH9 583 aa11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 CXorf40AQ8TE69 158 aa11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 PGAP3Q96FM1 320 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 EDEM3Q9BZQ6 932 aa11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 SCAND2PQ9GZW5 306 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 GOLPH3LQ9H4A5 285 aa11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 SYNCQ9H7C4 482 aa11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 UBE2TQ9NPD8 197 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 MPP6Q9NZW5 540 aa11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 AKAP7Q9P0M2 348 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 GGT7Q9UJ14 662 aa11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 APPL1Q9UKG1 709 aa11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 ITM2BQ9Y287 266 aa11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 FCF1Q9Y324 198 aaKnown RBP11.62□□□□□ -0.55
TRAPPC9-203ENST00000517667 STMND1H3BQB6 276 aa11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 AREL1O15033 823 aa11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 RASGRP1O95267 797 aa11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 GSRP00390 522 aa11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 CELA2BP08218 269 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 GLB1P16278 677 aa11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 CR2P20023 1033 aa11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 PPP1R2P41236 205 aa11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 SULT1E1P49888 294 aa11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 ATP1A2P50993 1020 aa11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 SNRPD1P62314 119 aaKnown RBP11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 CYP4F2P78329 520 aa11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 GNA12Q03113 381 aa11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 CLCA4Q14CN2 919 aa11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 POLD3Q15054 466 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 OTUD1Q5VV17 481 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 SMYD5Q6GMV2 418 aa11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 HID1Q8IV36 788 aa11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 C1orf131Q8NDD1 294 aaKnown RBP11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 OR2AP1Q8NGE2 309 aa11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 HTR3CQ8WXA8 447 aa11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 USP7Q93009 1102 aa11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 DHTKD1Q96HY7 919 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 NPY6RQ99463 290 aa11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 EPAS1Q99814 870 aa11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 TM6SF2Q9BZW4 377 aa11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 ZYG11BQ9C0D3 744 aa11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 INTS2Q9H0H0 1204 aaKnown RBP11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 EPN3Q9H201 632 aa11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 FOXJ2Q9P0K8 574 aa11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 ANAPC2Q9UJX6 822 aa11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 PCDHGC3Q9UN70 934 aa11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 UNC13CQ8NB66 2214 aa11.61□□□□□ -0.55
TRAPPC9-203ENST00000517667 USP9XQ93008 2570 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC9-203ENST00000517667 SPTAN1Q13813 2472 aaKnown RBP11.6□□□□□ -0.55
TRAPPC9-203ENST00000517667 CLEC18AA5D8T8 446 aa11.6□□□□□ -0.55
TRAPPC9-203ENST00000517667 I6L893 689 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC9-203ENST00000517667 KRIT1O00522 736 aa11.6□□□□□ -0.55
TRAPPC9-203ENST00000517667 SRGAP2O75044 1071 aa11.6□□□□□ -0.55
TRAPPC9-203ENST00000517667 POP4O95707 220 aaKnown RBP11.6□□□□□ -0.55
TRAPPC9-203ENST00000517667 UGT2B4P06133 528 aa11.6□□□□□ -0.55
TRAPPC9-203ENST00000517667 CASRP41180 1078 aa11.6□□□□□ -0.55
TRAPPC9-203ENST00000517667 MAPK10P53779 464 aa11.6□□□□□ -0.55
TRAPPC9-203ENST00000517667 POLE2P56282 527 aa11.6□□□□□ -0.55
TRAPPC9-203ENST00000517667 FOXK1P85037 733 aa11.6□□□□□ -0.55
TRAPPC9-203ENST00000517667 DEUP1Q05D60 604 aa11.6□□□□□ -0.55
TRAPPC9-203ENST00000517667 KCNAB2Q13303 367 aa11.6□□□□□ -0.55
TRAPPC9-203ENST00000517667 ALG11Q2TAA5 492 aa11.6□□□□□ -0.55
TRAPPC9-203ENST00000517667 CERCAMQ5T4B2 595 aa11.6□□□□□ -0.55
TRAPPC9-203ENST00000517667 CLEC18BQ6UXF7 455 aa11.6□□□□□ -0.55
TRAPPC9-203ENST00000517667 SPRED1Q7Z699 444 aa11.6□□□□□ -0.55
TRAPPC9-203ENST00000517667 TTC7BQ86TV6 843 aa11.6□□□□□ -0.55
TRAPPC9-203ENST00000517667 WDTC1Q8N5D0 677 aa11.6□□□□□ -0.55
TRAPPC9-203ENST00000517667 TP53I13Q8NBR0 393 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC9-203ENST00000517667 CLEC18CQ8NCF0 446 aa11.6□□□□□ -0.55
TRAPPC9-203ENST00000517667 GPR156Q8NFN8 814 aa11.6□□□□□ -0.55
TRAPPC9-203ENST00000517667 NT5C3BQ969T7 300 aa11.6□□□□□ -0.55
TRAPPC9-203ENST00000517667 HAPLN3Q96S86 360 aa11.6□□□□□ -0.55
TRAPPC9-203ENST00000517667 ACP6Q9NPH0 428 aa11.6□□□□□ -0.55
TRAPPC9-203ENST00000517667 ANLNQ9NQW6 1124 aa11.6□□□□□ -0.55
TRAPPC9-203ENST00000517667 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.6□□□□□ -0.55
TRAPPC9-203ENST00000517667 ZNF212Q9UDV6 495 aa11.6□□□□□ -0.55
TRAPPC9-203ENST00000517667 ATP6V1DQ9Y5K8 247 aa11.6□□□□□ -0.55
TRAPPC9-203ENST00000517667 RNF215Q9Y6U7 377 aa11.6□□□□□ -0.55
TRAPPC9-203ENST00000517667 UNC79Q9P2D8 2635 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 LRRK1Q38SD2 2015 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 C9orf172C9J069 976 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 MMP20O60882 483 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 GNA14O95837 355 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 ERBB2P04626 1255 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 WT1P19544 449 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 USP8P40818 1118 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 CCR10P46092 362 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 SUOXP51687 545 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 SRP54P61011 504 aaKnown RBP11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 RAD51Q06609 339 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 ARHGEF7Q14155 803 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 NFATC4Q14934 902 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 LRRC14Q15048 493 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 IRF4Q15306 451 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 KLHL40Q2TBA0 621 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 SLC25A52Q3SY17 297 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms