RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 ADRA1BP35368 520 aa5.9□□□□□ -1.46
CTNNA1-202ENST00000517533 CTSWP56202 376 aa5.9□□□□□ -1.46
CTNNA1-202ENST00000517533 CDK18Q07002 472 aa5.9□□□□□ -1.46
CTNNA1-202ENST00000517533 GOLGA8DPQ0D2H9 430 aa5.9□□□□□ -1.46
CTNNA1-202ENST00000517533 KLHL30Q0D2K2 578 aa5.9□□□□□ -1.46
CTNNA1-202ENST00000517533 TUBA3CQ13748 450 aa5.9□□□□□ -1.46
CTNNA1-202ENST00000517533 TAF7Q15545 349 aaPredicted RBP5.9□□□□□ -1.46
CTNNA1-202ENST00000517533 TYSND1Q2T9J0 566 aa5.9□□□□□ -1.46
CTNNA1-202ENST00000517533 CRY2Q49AN0 593 aa5.9□□□□□ -1.46
CTNNA1-202ENST00000517533 NHSL2Q5HYW2 709 aa5.9□□□□□ -1.46
CTNNA1-202ENST00000517533 TUBA3EQ6PEY2 450 aa5.9□□□□□ -1.46
CTNNA1-202ENST00000517533 KYAT3Q6YP21 454 aaKnown RBP5.9□□□□□ -1.46
CTNNA1-202ENST00000517533 PARS2Q7L3T8 475 aaKnown RBP5.9□□□□□ -1.46
CTNNA1-202ENST00000517533 SIRT6Q8N6T7 355 aa5.9□□□□□ -1.46
CTNNA1-202ENST00000517533 RP9Q8TA86 221 aaKnown RBP5.9□□□□□ -1.46
CTNNA1-202ENST00000517533 DENND1AQ8TEH3 1009 aa5.9□□□□□ -1.46
CTNNA1-202ENST00000517533 LINC00476Q8WZB0 136 aa5.9□□□□□ -1.46
CTNNA1-202ENST00000517533 SMARCE1Q969G3 411 aa5.9□□□□□ -1.46
CTNNA1-202ENST00000517533 PDLIM5Q96HC4 596 aaKnown RBP5.9□□□□□ -1.46
CTNNA1-202ENST00000517533 VPS50Q96JG6 964 aa5.9□□□□□ -1.46
CTNNA1-202ENST00000517533 SYT17Q9BSW7 474 aa5.9□□□□□ -1.46
CTNNA1-202ENST00000517533 FSD1LQ9BXM9 530 aa5.9□□□□□ -1.46
CTNNA1-202ENST00000517533 GLIS2Q9BZE0 524 aaPredicted RBP5.9□□□□□ -1.46
CTNNA1-202ENST00000517533 IKZF4Q9H2S9 585 aa5.9□□□□□ -1.46
CTNNA1-202ENST00000517533 FBRSL1Q9HCM7 1045 aaKnown RBP5.9□□□□□ -1.46
CTNNA1-202ENST00000517533 ABHD10Q9NUJ1 306 aa5.9□□□□□ -1.46
CTNNA1-202ENST00000517533 AMFRQ9UKV5 643 aa5.9□□□□□ -1.46
CTNNA1-202ENST00000517533 EPN1Q9Y6I3 576 aaPredicted RBP5.9□□□□□ -1.46
CTNNA1-202ENST00000517533 SESN1Q9Y6P5 492 aa5.9□□□□□ -1.46
CTNNA1-202ENST00000517533 TRBC2A0A5B9 178 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 KCNJ18B7U540 433 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 NXPH3O95157 252 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 SUPT20HL2P0C7V6 817 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 APEHP13798 732 aaKnown RBP5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 PCP4P48539 62 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 RPA4Q13156 261 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 FOXE3Q13461 319 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 ALCAMQ13740 583 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 BAATQ14032 418 aaPredicted RBP5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 MORF4L2Q15014 288 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 ASTE1Q2TB18 679 aaPredicted RBP5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 SUPT20HL1Q3ZLR7 823 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 ANKDD1AQ495B1 522 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 TMEM81Q6P7N7 255 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 KIRREL2Q6UWL6 708 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 Q6YL49 198 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 ZNF551Q7Z340 670 aaPredicted RBP5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 SPRED1Q7Z699 444 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 LURAP1LQ8IV03 231 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 FAM217AQ8IXS0 508 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 TBC1D21Q8IYX1 336 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 FAM185AQ8N0U4 392 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 CCAR2Q8N163 923 aaKnown RBP5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 DPP10Q8N608 796 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 LINC01465Q8N7H1 131 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 ZBTB44Q8NCP5 570 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 OR52L2PQ8NGH6 319 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 GLMPQ8WWB7 406 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 CNOT9Q92600 299 aaKnown RBP5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 ZKSCAN4Q969J2 545 aaPredicted RBP5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 PGAM5Q96HS1 289 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 SNX18Q96RF0 628 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 CDK5RAP1Q96SZ6 601 aaKnown RBP5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 PAFAH2Q99487 392 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 CCDC106Q9BWC9 280 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 USP29Q9HBJ7 922 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 PFDN4Q9NQP4 134 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 INTS10Q9NVR2 710 aaKnown RBP5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 ASIC5Q9NY37 505 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 PEMTQ9UBM1 199 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 CCNL1Q9UK58 526 aaPredicted RBP5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 ST3GAL5Q9UNP4 418 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 PPIEQ9UNP9 301 aaKnown RBP5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 IGSF1Q8N6C5 1336 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 ATAD2BQ9ULI0 1458 aa5.89□□□□□ -1.47
CTNNA1-202ENST00000517533 COL4A3Q01955 1670 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 ARHGEF37A1IGU5 675 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 GRID2IPA4D2P6 1211 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 OR6C76A6NM76 312 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 CDRT15L2A8MXV6 281 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 ZNF213O14771 459 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 NDC80O14777 642 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 TACC1O75410 805 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 SLCO2B1O94956 709 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 CYP2A6P11509 494 aaPredicted RBP5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 MMP8P22894 467 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 MC5RP33032 325 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 PTGS2P35354 604 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 PRKCIP41743 596 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 AGTR2P50052 363 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 EFNA5P52803 228 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 SUMO2P61956 95 aaKnown RBP5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 ARHGAP8P85298 464 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 TLE3Q04726 772 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 GOLGA8FQ08AF8 430 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 NIPAL4Q0D2K0 466 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 ITGA7Q13683 1181 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 PTK6Q13882 451 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 TUBB2AQ13885 445 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 IL11RAQ14626 422 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms