RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 TTLL3Q9Y4R7 772 aa9.99□□□□□ -0.81
CLN8-202ENST00000517514 TNRC6BQ9UPQ9 1833 aaKnown RBP9.98□□□□□ -0.81
CLN8-202ENST00000517514 GOLGA6L10A0A0M3HER8 536 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 TCRBV7S3A2A0A539 114 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 PRR33A8MZF0 331 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 TTI1O43156 1089 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 RAD51CO43502 376 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 IFNB1P01574 187 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 IL1BP01584 269 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 KRT14P02533 472 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 TIMP2P16035 220 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 HOXA6P31267 233 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 ABL2P42684 1182 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 CCR3P51677 355 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 TAS2R38P59533 333 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 ITKQ08881 620 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 CNTN1Q12860 1018 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 MSLNQ13421 630 aaPredicted RBP9.98□□□□□ -0.81
CLN8-202ENST00000517514 PTK6Q13882 451 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 STARD3Q14849 445 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 SLC14A2Q15849 920 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 PARP6Q2NL67 630 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 RALGPS1Q5JS13 557 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 PIP5KL1Q5T9C9 394 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 ZNF776Q68DI1 518 aaPredicted RBP9.98□□□□□ -0.81
CLN8-202ENST00000517514 DENND5AQ6IQ26 1287 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 ANO7Q6IWH7 933 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 PARS2Q7L3T8 475 aaKnown RBP9.98□□□□□ -0.81
CLN8-202ENST00000517514 JAMLQ86YT9 394 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 C1orf210Q8IVY1 113 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 HMGB4Q8WW32 186 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 PIH1D2Q8WWB5 315 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 NELL1Q92832 810 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 LRIG1Q96JA1 1093 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 CCDC114Q96M63 670 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 TUBGCP5Q96RT8 1024 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 TRIM51Q9BSJ1 452 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 LRFN3Q9BTN0 628 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 CARD6Q9BX69 1037 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 TDRD1Q9BXT4 1180 aaKnown RBP9.98□□□□□ -0.81
CLN8-202ENST00000517514 PABPC3Q9H361 631 aaKnown RBP9.98□□□□□ -0.81
CLN8-202ENST00000517514 SUV39H2Q9H5I1 410 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 FBRSQ9HAH7 460 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 POLMQ9NP87 494 aaPredicted RBP9.98□□□□□ -0.81
CLN8-202ENST00000517514 RRAGDQ9NQL2 400 aaPredicted RBP9.98□□□□□ -0.81
CLN8-202ENST00000517514 RSPH14Q9UHP6 348 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 SLC8A2Q9UPR5 921 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 RAI2Q9Y5P3 530 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 FRYLO94915 3013 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 PLXNA2O75051 1894 aa9.98□□□□□ -0.81
CLN8-202ENST00000517514 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.97□□□□□ -0.81
CLN8-202ENST00000517514 A0A0U1RQS6 177 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 LOC285095A0A1B0GVY8 99 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 C16orf96A6NNT2 1141 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 SOCS5O75159 536 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 PMPCBO75439 489 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 PGLSO95336 258 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 APBB3O95704 486 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 IGLV3-19P01714 112 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 PRNPP04156 253 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 PRKCGP05129 697 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 SERPINF2P08697 491 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 ATXN1LP0C7T5 689 aaKnown RBP9.97□□□□□ -0.81
CLN8-202ENST00000517514 C5AR1P21730 350 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 CES1P23141 567 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 ITGB7P26010 798 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 P2RY2P41231 377 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 GRIA1P42261 906 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 RECQLP46063 649 aaPredicted RBP9.97□□□□□ -0.81
CLN8-202ENST00000517514 VPS41P49754 854 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 TPMTP51580 245 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 WNT3AP56704 352 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 DR1Q01658 176 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 CKAP4Q07065 602 aaKnown RBP9.97□□□□□ -0.81
CLN8-202ENST00000517514 BCL2L1Q07817 233 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 SEMA5AQ13591 1074 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 SPARCL1Q14515 664 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 TRADDQ15628 312 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 MAP7D1Q3KQU3 841 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 ZNF805Q5CZA5 627 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 LRRC73Q5JTD7 316 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 AGBL4Q5VU57 503 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 ANKRD22Q5VYY1 191 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 ARHGEF18Q6ZSZ5 1173 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 BBS5Q8N3I7 341 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 MMGT1Q8N4V1 131 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 CAMKK1Q8N5S9 505 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 TSTD1Q8NFU3 115 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 RLN3Q8WXF3 142 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 SIPA1Q96FS4 1042 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 ZNF641Q96N77 438 aaPredicted RBP9.97□□□□□ -0.81
CLN8-202ENST00000517514 OSBPL1AQ9BXW6 950 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 TPSD1Q9BZJ3 242 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 ATP13A3Q9H7F0 1226 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 ITM2CQ9NQX7 267 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 PAK5Q9P286 719 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 DKK3Q9UBP4 350 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 FAM153AQ9UHL3 310 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 GGT7Q9UJ14 662 aa9.97□□□□□ -0.81
CLN8-202ENST00000517514 CHKBQ9Y259 395 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms