RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 FAIMQ9NVQ4 179 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 TMEM9Q9P0T7 183 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 FBXO9Q9UK97 447 aaPredicted RBP6.72□□□□□ -1.33
CPNE3-203ENST00000517490 COPG1Q9Y678 874 aaKnown RBP6.72□□□□□ -1.33
CPNE3-203ENST00000517490 TRIM43BA6NCK2 446 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 H3BNH8 94 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 NDUFS3O75489 264 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 UMPSP11172 480 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 DNAJB1P25685 340 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 GRIK1P39086 918 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 RPS9P46781 194 aaKnown RBP6.72□□□□□ -1.33
CPNE3-203ENST00000517490 GJA8P48165 433 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 JAG1P78504 1218 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 MERTKQ12866 999 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 ITGA7Q13683 1181 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 SLC25A52Q3SY17 297 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 PERM1Q5SV97 790 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 TWF2Q6IBS0 349 aaKnown RBP6.72□□□□□ -1.33
CPNE3-203ENST00000517490 GALNT18Q6P9A2 607 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 KLHL35Q6PF15 583 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 KCTD8Q6ZWB6 473 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 EID3Q8N140 333 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 TTC30BQ8N4P2 665 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 AADATQ8N5Z0 425 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 ARL10Q8N8L6 244 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 RAB2BQ8WUD1 216 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 C12orf43Q96C57 262 aaKnown RBP6.72□□□□□ -1.33
CPNE3-203ENST00000517490 PEBP4Q96S96 227 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 DGCR6LQ9BY27 220 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 CD274Q9NZQ7 290 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 LEF1Q9UJU2 399 aaPredicted RBP6.72□□□□□ -1.33
CPNE3-203ENST00000517490 PIN4Q9Y237 131 aaKnown RBP6.72□□□□□ -1.33
CPNE3-203ENST00000517490 A0A0J9YYE9 177 aa6.71□□□□□ -1.33
CPNE3-203ENST00000517490 YDJCA8MPS7 323 aa6.71□□□□□ -1.33
CPNE3-203ENST00000517490 B4GALT5O43286 388 aa6.71□□□□□ -1.33
CPNE3-203ENST00000517490 IPO13O94829 963 aaKnown RBP6.71□□□□□ -1.33
CPNE3-203ENST00000517490 CDK4P11802 303 aa6.71□□□□□ -1.33
CPNE3-203ENST00000517490 YBX3P16989 372 aaKnown RBP eCLIP6.71□□□□□ -1.335e-6■■■■□ 19.4
CPNE3-203ENST00000517490 ERCC2P18074 760 aa6.71□□□□□ -1.33
CPNE3-203ENST00000517490 ENTPD1P49961 510 aa6.71□□□□□ -1.33
CPNE3-203ENST00000517490 MPP1Q00013 466 aa6.71□□□□□ -1.33
CPNE3-203ENST00000517490 ZNF235Q14590 738 aa6.71□□□□□ -1.33
CPNE3-203ENST00000517490 MOGQ16653 247 aa6.71□□□□□ -1.33
CPNE3-203ENST00000517490 TBC1D25Q3MII6 688 aa6.71□□□□□ -1.33
CPNE3-203ENST00000517490 TMEM198Q66K66 360 aa6.71□□□□□ -1.33
CPNE3-203ENST00000517490 STEAP4Q687X5 459 aa6.71□□□□□ -1.33
CPNE3-203ENST00000517490 PMF1Q6P1K2 205 aa6.71□□□□□ -1.33
CPNE3-203ENST00000517490 PROSER1Q86XN7 944 aa6.71□□□□□ -1.33
CPNE3-203ENST00000517490 SPPL2CQ8IUH8 684 aa6.71□□□□□ -1.33
CPNE3-203ENST00000517490 P3H2Q8IVL5 708 aa6.71□□□□□ -1.33
CPNE3-203ENST00000517490 THEM5Q8N1Q8 247 aa6.71□□□□□ -1.33
CPNE3-203ENST00000517490 FSTL5Q8N475 847 aaPredicted RBP6.71□□□□□ -1.33
CPNE3-203ENST00000517490 LZTR1Q8N653 840 aa6.71□□□□□ -1.33
CPNE3-203ENST00000517490 REPS2Q8NFH8 660 aa6.71□□□□□ -1.33
CPNE3-203ENST00000517490 BCO2Q9BYV7 579 aa6.71□□□□□ -1.33
CPNE3-203ENST00000517490 PCDHAC1Q9H158 963 aa6.71□□□□□ -1.33
CPNE3-203ENST00000517490 RMI1Q9H9A7 625 aa6.71□□□□□ -1.33
CPNE3-203ENST00000517490 POLG2Q9UHN1 485 aa6.71□□□□□ -1.33
CPNE3-203ENST00000517490 VPS28Q9UK41 221 aa6.71□□□□□ -1.33
CPNE3-203ENST00000517490 STX16-NPEPL1H3BU86 382 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 UGT1A6P19224 532 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 UGT1A1P22309 533 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 UGT1A4P22310 534 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 UGT1A3P35503 534 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 UGT1A5P35504 534 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 INPP1P49441 399 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 IL5RAQ01344 420 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 ZNF423Q2M1K9 1284 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 KIZQ2M2Z5 673 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 ANKS6Q68DC2 871 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 PKN3Q6P5Z2 889 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 OLFML1Q6UWY5 402 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 CCDC117Q8IWD4 279 aaPredicted RBP6.71□□□□□ -1.34
CPNE3-203ENST00000517490 MINDY2Q8NBR6 621 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 NXNL1Q96CM4 212 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 ISOC1Q96CN7 298 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 PABPC5Q96DU9 382 aaKnown RBP6.71□□□□□ -1.34
CPNE3-203ENST00000517490 CELF6Q96J87 481 aaKnown RBP6.71□□□□□ -1.34
CPNE3-203ENST00000517490 PLEKHA8Q96JA3 519 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 LIN28AQ9H9Z2 209 aaKnown RBP6.71□□□□□ -1.34
CPNE3-203ENST00000517490 RBM22Q9NW64 420 aaKnown RBP eCLIP6.71□□□□□ -1.34
CPNE3-203ENST00000517490 EGFL7Q9UHF1 273 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 FBXO5Q9UKT4 447 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 VPS9D1Q9Y2B5 631 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 TRIM17Q9Y577 477 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 SCN7AQ01118 1682 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 MYO1GB0I1T2 1018 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 CLDN25C9JDP6 229 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 HTRA2O43464 458 aaPredicted RBP6.71□□□□□ -1.34
CPNE3-203ENST00000517490 IDO1P14902 403 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 CKMT2P17540 419 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 PSMB9P28065 219 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 ICAM3P32942 547 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 ETFBP38117 255 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 ST13P50502 369 aaKnown RBP6.71□□□□□ -1.34
CPNE3-203ENST00000517490 CDH15P55291 814 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 IRF9Q00978 393 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 CTBP1Q13363 440 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 DLG2Q15700 870 aa6.71□□□□□ -1.34
CPNE3-203ENST00000517490 FSCN1Q16658 493 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms