RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 FOXL2P58012 376 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 CLRN1P58418 232 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 TAS2R50P59544 299 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 COG7P83436 770 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 CHRNEQ04844 493 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 GABPB1Q06547 395 aaPredicted RBP4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 MTAPQ13126 283 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 ALKBH1Q13686 389 aaKnown RBP4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 E2F2Q14209 437 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 IL13RA2Q14627 380 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 KARSQ15046 597 aaKnown RBP4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 PGM5Q15124 567 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 ZKSCAN8Q15776 578 aaPredicted RBP4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 SNAPC1Q16533 368 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 FBXO43Q4G163 708 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 CAVIN4Q5BKX8 364 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 CERCAMQ5T4B2 595 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 SHEQ5VZ18 495 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 KRT79Q5XKE5 535 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 FAM90A2PQ658T7 463 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 ANKS6Q68DC2 871 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 KRT39Q6A163 491 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 CENPPQ6IPU0 288 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 C16orf89Q6UX73 402 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 C15orf39Q6ZRI6 1047 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 RBM43Q6ZSC3 357 aaKnown RBP4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 PTCHD4Q6ZW05 846 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 TAF8Q7Z7C8 310 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 STK32CQ86UX6 486 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 AMIGO3Q86WK7 504 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 MFN1Q8IWA4 741 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 SLC15A3Q8IY34 581 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 CCDC13Q8IYE1 715 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 ELMOD2Q8IZ81 293 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 MAML2Q8IZL2 1156 aaPredicted RBP4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 ABRAQ8N0Z2 381 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 LILRA2Q8N149 483 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 VPS52Q8N1B4 723 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 CFAP52Q8N1V2 620 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 GUF1Q8N442 669 aaKnown RBP4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 BANPQ8N9N5 519 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 SLC4A11Q8NBS3 891 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 DBF4BQ8NFT6 615 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 TSPAN14Q8NG11 270 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 OR7G3Q8NG95 312 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 PTPMT1Q8WUK0 201 aaPredicted RBP4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 LENG1Q96BZ8 264 aaPredicted RBP4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 TSPAN17Q96FV3 270 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 TEX13AQ9BXU3 409 aaPredicted RBP4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 GLIS2Q9BZE0 524 aaPredicted RBP4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 SMOC2Q9H3U7 446 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 DENND2DQ9H6A0 471 aaPredicted RBP4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 RANGRFQ9HD47 186 aaPredicted RBP4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 NGBQ9NPG2 151 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 OLAHQ9NV23 265 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 MTMR4Q9NYA4 1195 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 PLA2G2EQ9NZK7 142 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 NCKIPSDQ9NZQ3 722 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 CRNNQ9UBG3 495 aaPredicted RBP4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 RIMKLBQ9ULI2 386 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 A4GNTQ9UNA3 340 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 SNX9Q9Y5X1 595 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 COPG1Q9Y678 874 aaKnown RBP4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 TEX264Q9Y6I9 313 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 SALL3Q9BXA9 1300 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 ZNF335Q9H4Z2 1342 aaPredicted RBP4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 A0A1B0GVM2 712 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 TCAF2A6NFQ2 919 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 LRRIQ4A6NIV6 560 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 KDM4EB2RXH2 506 aaPredicted RBP4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 PIK3R2O00459 728 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 BIN1O00499 593 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 GMFGO60234 142 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 USP12O75317 370 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 SLC25A12O75746 678 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 F13BP05160 661 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 OR52Z1P0C646 297 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 MMP9P14780 707 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 PRLRP16471 622 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 ITIH1P19827 911 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 AHCYP23526 432 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 POU1F1P28069 291 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 IL13P35225 146 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 MTHFSP49914 203 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 MEOX1P50221 254 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 TGFB2P61812 414 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 ATP2C1P98194 919 aaPredicted RBP4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 TLE3Q04726 772 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 MZT1Q08AG7 82 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 GRSF1Q12849 480 aaKnown RBP eCLIP4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 CHIT1Q13231 466 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 RAPSNQ13702 412 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 KCNC3Q14003 757 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 EIF4HQ15056 248 aaKnown RBP4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 NAB2Q15742 525 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 GPR162Q16538 588 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms