RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 ACMSDQ8TDX5 336 aa20.31■□□□□ 0.84
TRIO-223ENST00000515710 ZSWIM3Q96MP5 696 aa20.31■□□□□ 0.84
TRIO-223ENST00000515710 TRIB3Q96RU7 358 aa20.31■□□□□ 0.84
TRIO-223ENST00000515710 SFXN1Q9H9B4 322 aa20.31■□□□□ 0.84
TRIO-223ENST00000515710 IARS2Q9NSE4 1012 aaKnown RBP20.31■□□□□ 0.84
TRIO-223ENST00000515710 MKS1Q9NXB0 559 aa20.31■□□□□ 0.84
TRIO-223ENST00000515710 SLC17A6Q9P2U8 582 aa20.31■□□□□ 0.84
TRIO-223ENST00000515710 PSAT1Q9Y617 370 aa20.31■□□□□ 0.84
TRIO-223ENST00000515710 VGLL3A8MV65 326 aa20.3■□□□□ 0.84
TRIO-223ENST00000515710 PRAMEF12O95522 483 aa20.3■□□□□ 0.84
TRIO-223ENST00000515710 FAM107AO95990 144 aa20.3■□□□□ 0.84
TRIO-223ENST00000515710 PENKP01210 267 aaPredicted RBP20.3■□□□□ 0.84
TRIO-223ENST00000515710 ITGA2BP08514 1039 aa20.3■□□□□ 0.84
TRIO-223ENST00000515710 WDR4P57081 412 aaKnown RBP20.3■□□□□ 0.84
TRIO-223ENST00000515710 PEX13Q92968 403 aa20.3■□□□□ 0.84
TRIO-223ENST00000515710 MAGEB18Q96M61 343 aa20.3■□□□□ 0.84
TRIO-223ENST00000515710 CCT8L2Q96SF2 557 aa20.3■□□□□ 0.84
TRIO-223ENST00000515710 RBBP8Q99708 897 aa20.3■□□□□ 0.84
TRIO-223ENST00000515710 GDF15Q99988 308 aa20.3■□□□□ 0.84
TRIO-223ENST00000515710 SLC28A3Q9HAS3 691 aa20.3■□□□□ 0.84
TRIO-223ENST00000515710 LHX3Q9UBR4 397 aa20.3■□□□□ 0.84
TRIO-223ENST00000515710 CLEC4EQ9ULY5 219 aa20.3■□□□□ 0.84
TRIO-223ENST00000515710 COPEO14579 308 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 SLC9A3R1O14745 358 aaPredicted RBP20.29■□□□□ 0.84
TRIO-223ENST00000515710 ARCN1P48444 511 aaKnown RBP20.29■□□□□ 0.84
TRIO-223ENST00000515710 NEK3P51956 506 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 RHOAP61586 193 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 KCNC3Q14003 757 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 CNGA3Q16281 694 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 PLEKHG6Q3KR16 790 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 HHATQ5VTY9 493 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 NCEH1Q6PIU2 408 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 TMEM25Q86YD3 366 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 CNTN4Q8IWV2 1026 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 GABPB2Q8TAK5 448 aaPredicted RBP20.29■□□□□ 0.84
TRIO-223ENST00000515710 TCP10LQ8TDR4 215 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 IRF7Q92985 503 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 LMLNQ96KR4 655 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 ZNF317Q96PQ6 595 aaPredicted RBP20.29■□□□□ 0.84
TRIO-223ENST00000515710 AGAP2Q99490 1192 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 YY1AP1Q9H869 796 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 MLXIPLQ9NP71 852 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 SPHK2Q9NRA0 654 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 ABCB8Q9NUT2 735 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 DZANK1Q9NVP4 752 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 MROH6A6NGR9 719 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 NDUFAB1O14561 156 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 SIN3BO75182 1162 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 VAPBO95292 243 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 LIMK2P53671 638 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 THOC5Q13769 683 aaKnown RBP20.29■□□□□ 0.84
TRIO-223ENST00000515710 CELF5Q8N6W0 485 aaKnown RBP20.29■□□□□ 0.84
TRIO-223ENST00000515710 C12orf76Q8N812 135 aaPredicted RBP20.29■□□□□ 0.84
TRIO-223ENST00000515710 GDAP1Q8TB36 358 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 ITFG1Q8TB96 612 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 GDPD5Q8WTR4 605 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 ING5Q8WYH8 240 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 EXOC2Q96KP1 924 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 TDRD1Q9BXT4 1180 aaKnown RBP20.29■□□□□ 0.84
TRIO-223ENST00000515710 RASSF4Q9H2L5 321 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 SLC2A6Q9UGQ3 507 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 RIMKLBQ9ULI2 386 aa20.29■□□□□ 0.84
TRIO-223ENST00000515710 NOTCH4Q99466 2003 aa20.28■□□□□ 0.84
TRIO-223ENST00000515710 CCDC78A2IDD5 438 aa20.28■□□□□ 0.84
TRIO-223ENST00000515710 CCDC85CA6NKD9 419 aa20.28■□□□□ 0.84
TRIO-223ENST00000515710 TIMM44O43615 452 aa20.28■□□□□ 0.84
TRIO-223ENST00000515710 CD70P32970 193 aa20.28■□□□□ 0.84
TRIO-223ENST00000515710 UGP2Q16851 508 aa20.28■□□□□ 0.84
TRIO-223ENST00000515710 LVRNQ6Q4G3 990 aa20.28■□□□□ 0.84
TRIO-223ENST00000515710 TMC5Q6UXY8 1006 aa20.28■□□□□ 0.84
TRIO-223ENST00000515710 BRSK1Q8TDC3 778 aa20.28■□□□□ 0.84
TRIO-223ENST00000515710 PPP2R3CQ969Q6 453 aa20.28■□□□□ 0.84
TRIO-223ENST00000515710 PAIP2Q9BPZ3 127 aaKnown RBP20.28■□□□□ 0.84
TRIO-223ENST00000515710 FAM167BQ9BTA0 163 aa20.28■□□□□ 0.84
TRIO-223ENST00000515710 HADHAP40939 763 aa20.27■□□□□ 0.84
TRIO-223ENST00000515710 CCT5P48643 541 aa20.27■□□□□ 0.84
TRIO-223ENST00000515710 CSNK1DP48730 415 aa20.27■□□□□ 0.84
TRIO-223ENST00000515710 PDE1BQ01064 536 aa20.27■□□□□ 0.84
TRIO-223ENST00000515710 GALNT3Q14435 633 aa20.27■□□□□ 0.84
TRIO-223ENST00000515710 SRLQ86TD4 932 aa20.27■□□□□ 0.84
TRIO-223ENST00000515710 ADGRG2Q8IZP9 1017 aa20.27■□□□□ 0.84
TRIO-223ENST00000515710 CALML6Q8TD86 181 aa20.27■□□□□ 0.84
TRIO-223ENST00000515710 NSMCE3Q96MG7 304 aa20.27■□□□□ 0.84
TRIO-223ENST00000515710 BBS2Q9BXC9 721 aa20.27■□□□□ 0.84
TRIO-223ENST00000515710 RABEP2Q9H5N1 569 aa20.27■□□□□ 0.84
TRIO-223ENST00000515710 CHKBQ9Y259 395 aa20.27■□□□□ 0.84
TRIO-223ENST00000515710 FCF1Q9Y324 198 aaKnown RBP20.27■□□□□ 0.84
TRIO-223ENST00000515710 RAI2Q9Y5P3 530 aa20.27■□□□□ 0.84
TRIO-223ENST00000515710 ARNTP27540 789 aa20.27■□□□□ 0.84
TRIO-223ENST00000515710 AP1S1P61966 158 aa20.27■□□□□ 0.84
TRIO-223ENST00000515710 CBX2Q14781 532 aaPredicted RBP20.27■□□□□ 0.84
TRIO-223ENST00000515710 SMAD1Q15797 465 aaKnown RBP20.27■□□□□ 0.84
TRIO-223ENST00000515710 PITRM1Q5JRX3 1037 aa20.27■□□□□ 0.84
TRIO-223ENST00000515710 CPLX4Q7Z7G2 160 aa20.27■□□□□ 0.84
TRIO-223ENST00000515710 RNF135Q8IUD6 432 aa20.27■□□□□ 0.84
TRIO-223ENST00000515710 ZNF473Q8WTR7 871 aaKnown RBP20.27■□□□□ 0.84
TRIO-223ENST00000515710 ISL2Q96A47 359 aa20.27■□□□□ 0.84
TRIO-223ENST00000515710 MCMBPQ9BTE3 642 aa20.27■□□□□ 0.84
TRIO-223ENST00000515710 ADGRE3Q9BY15 652 aa20.27■□□□□ 0.84
TRIO-223ENST00000515710 IQCGQ9H095 443 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms