RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620	RDH14	Q9HBH5	336 aa		10.64	□□□□□ -0.71
CLDND1-231	ENST00000515620	HECA	Q9UBI9	543 aa	Predicted RBP	10.64	□□□□□ -0.71
CLDND1-231	ENST00000515620	APPL1	Q9UKG1	709 aa		10.64	□□□□□ -0.71
CLDND1-231	ENST00000515620	SNX10	Q9Y5X0	201 aa		10.64	□□□□□ -0.71
CLDND1-231	ENST00000515620	ITPR2	Q14571	2701 aa		10.64	□□□□□ -0.71
CLDND1-231	ENST00000515620		A0A1B0GVL5	298 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620		A1L4Q6	167 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	PRR19	A6NJB7	356 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620		B4DGG1	531 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	SLC16A3	O15427	465 aa	Known RBP	10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	NKX2-8	O15522	239 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	DUX1	O43812	170 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	MMP20	O60882	483 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	TM7SF2	O76062	418 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	UGT1A3	P35503	534 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	ARSD	P51689	593 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	MTA1	Q13330	715 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	ARHGEF7	Q14155	803 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	ARHGAP44	Q17R89	818 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	KLHL40	Q2TBA0	621 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	ZNF805	Q5CZA5	627 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	RETSAT	Q6NUM9	610 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	ENPP7	Q6UWV6	458 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	RRAGA	Q7L523	313 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	TMEM110	Q86TL2	294 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	TP53I13	Q8NBR0	393 aa	Predicted RBP	10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	RCBTB1	Q8NDN9	531 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	CXorf40A	Q8TE69	158 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	STK32A	Q8WU08	396 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	SLC35C1	Q96A29	364 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	ARHGEF26	Q96DR7	871 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	PDXP	Q96GD0	296 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	ATP13A1	Q9HD20	1204 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	MPP6	Q9NZW5	540 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	LRIT1	Q9P2V4	623 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	KL	Q9UEF7	1012 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	USP25	Q9UHP3	1055 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	DAAM1	Q9Y4D1	1078 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	ACTL7A	Q9Y615	435 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	ABCA12	Q86UK0	2595 aa		10.63	□□□□□ -0.71
CLDND1-231	ENST00000515620	KRIT1	O00522	736 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	TOR1B	O14657	336 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	AREL1	O15033	823 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	ZMPSTE24	O75844	475 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	UGT2B4	P06133	528 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	FGF3	P11487	239 aa	Predicted RBP	10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	KRT5	P13647	590 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	NR1D1	P20393	614 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	HTR1B	P28222	390 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	OR1E1	P30953	314 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	SRP54	P61011	504 aa	Known RBP	10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	ARF5	P84085	180 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	CDC20	Q12834	499 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	DPYD	Q12882	1025 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	KLRB1	Q12918	225 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	PDCL	Q13371	301 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	NFATC4	Q14934	902 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	AMZ1	Q400G9	498 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	C14orf28	Q4W4Y0	310 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	FHL5	Q5TD97	284 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	KCTD16	Q68DU8	428 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	ARHGEF19	Q8IW93	802 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	ZNF683	Q8IZ20	524 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	FAM46D	Q8NEK8	389 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	SSC4D	Q8WTU2	575 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	ART4	Q93070	314 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	INTS4	Q96HW7	963 aa	Known RBP	10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	CCDC74B	Q96LY2	380 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	TAAR9	Q96RI9	348 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	WRAP53	Q9BUR4	548 aa	Known RBP	10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	CDH19	Q9H159	772 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	ANLN	Q9NQW6	1124 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	ARMCX3	Q9UH62	379 aa	Predicted RBP	10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	TP53TG5	Q9Y2B4	290 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	COQ6	Q9Y2Z9	468 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	OR1A2	Q9Y585	309 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	B3GALT1	Q9Y5Z6	326 aa		10.62	□□□□□ -0.71
CLDND1-231	ENST00000515620	CENPE	Q02224	2701 aa		10.61	□□□□□ -0.71
CLDND1-231	ENST00000515620	LRP4	O75096	1905 aa		10.61	□□□□□ -0.71
CLDND1-231	ENST00000515620	HGS	O14964	777 aa	Predicted RBP	10.61	□□□□□ -0.71
CLDND1-231	ENST00000515620	RAD1	O60671	282 aa		10.61	□□□□□ -0.71
CLDND1-231	ENST00000515620	HSF2BP	O75031	334 aa		10.61	□□□□□ -0.71
CLDND1-231	ENST00000515620	KRT38	O76015	456 aa		10.61	□□□□□ -0.71
CLDND1-231	ENST00000515620	LETM1	O95202	739 aa	Predicted RBP	10.61	□□□□□ -0.71
CLDND1-231	ENST00000515620	CPNE6	O95741	557 aa		10.61	□□□□□ -0.71
CLDND1-231	ENST00000515620	RNF224	P0DH78	156 aa		10.61	□□□□□ -0.71
CLDND1-231	ENST00000515620	PNLIP	P16233	465 aa		10.61	□□□□□ -0.71
CLDND1-231	ENST00000515620	GNLY	P22749	145 aa		10.61	□□□□□ -0.71
CLDND1-231	ENST00000515620	FMO5	P49326	533 aa		10.61	□□□□□ -0.71
CLDND1-231	ENST00000515620	PEX5	P50542	639 aa		10.61	□□□□□ -0.71
CLDND1-231	ENST00000515620	HLTF	Q14527	1009 aa	Known RBP eCLIP	10.61	□□□□□ -0.71
CLDND1-231	ENST00000515620	LRRC14	Q15048	493 aa		10.61	□□□□□ -0.71
CLDND1-231	ENST00000515620	DEFB109B	Q30KR1	87 aa		10.61	□□□□□ -0.71
CLDND1-231	ENST00000515620	OTUD1	Q5VV17	481 aa	Predicted RBP	10.61	□□□□□ -0.71
CLDND1-231	ENST00000515620	ZNF787	Q6DD87	383 aa		10.61	□□□□□ -0.71
CLDND1-231	ENST00000515620	LRRC31	Q6UY01	552 aa		10.61	□□□□□ -0.71
CLDND1-231	ENST00000515620	TAF8	Q7Z7C8	310 aa		10.61	□□□□□ -0.71
CLDND1-231	ENST00000515620	TTC7B	Q86TV6	843 aa		10.61	□□□□□ -0.71
CLDND1-231	ENST00000515620	PIM3	Q86V86	326 aa		10.61	□□□□□ -0.71
CLDND1-231	ENST00000515620	APOBEC4	Q8WW27	367 aa	Known RBP	10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms