RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 PSAPL1Q6NUJ1 521 aa12.93□□□□□ -0.34
CLCN3-210ENST00000515420 LAYNQ6UX15 382 aa12.93□□□□□ -0.34
CLCN3-210ENST00000515420 ARHGAP36Q6ZRI8 547 aa12.93□□□□□ -0.34
CLCN3-210ENST00000515420 TMTC1Q8IUR5 882 aa12.93□□□□□ -0.34
CLCN3-210ENST00000515420 BBS5Q8N3I7 341 aa12.93□□□□□ -0.34
CLCN3-210ENST00000515420 TSEN2Q8NCE0 465 aaKnown RBP12.93□□□□□ -0.34
CLCN3-210ENST00000515420 DENND6BQ8NEG7 585 aa12.93□□□□□ -0.34
CLCN3-210ENST00000515420 NSMCE1Q8WV22 266 aa12.93□□□□□ -0.34
CLCN3-210ENST00000515420 SPOCK2Q92563 424 aa12.93□□□□□ -0.34
CLCN3-210ENST00000515420 FATE1Q969F0 183 aa12.93□□□□□ -0.34
CLCN3-210ENST00000515420 CALR3Q96L12 384 aaKnown RBP12.93□□□□□ -0.34
CLCN3-210ENST00000515420 C1QTNF2Q9BXJ5 285 aa12.93□□□□□ -0.34
CLCN3-210ENST00000515420 CALN1Q9BXU9 219 aa12.93□□□□□ -0.34
CLCN3-210ENST00000515420 SUV39H2Q9H5I1 410 aa12.93□□□□□ -0.34
CLCN3-210ENST00000515420 ATP13A3Q9H7F0 1226 aa12.93□□□□□ -0.34
CLCN3-210ENST00000515420 GDF3Q9NR23 364 aa12.93□□□□□ -0.34
CLCN3-210ENST00000515420 NCOR2Q9Y618 2525 aa12.92□□□□□ -0.34
CLCN3-210ENST00000515420 A0A1B0GTQ1 180 aa12.92□□□□□ -0.34
CLCN3-210ENST00000515420 PEX11BO96011 259 aa12.92□□□□□ -0.34
CLCN3-210ENST00000515420 CD48P09326 243 aa12.92□□□□□ -0.34
CLCN3-210ENST00000515420 SERPINA4P29622 427 aa12.92□□□□□ -0.34
CLCN3-210ENST00000515420 GJC1P36383 396 aa12.92□□□□□ -0.34
CLCN3-210ENST00000515420 ABL2P42684 1182 aa12.92□□□□□ -0.34
CLCN3-210ENST00000515420 MAGEA1P43355 309 aa12.92□□□□□ -0.34
CLCN3-210ENST00000515420 ARRB1P49407 418 aaPredicted RBP12.92□□□□□ -0.34
CLCN3-210ENST00000515420 MMRN1Q13201 1228 aa12.92□□□□□ -0.34
CLCN3-210ENST00000515420 ZNF235Q14590 738 aa12.92□□□□□ -0.34
CLCN3-210ENST00000515420 INAVAQ3KP66 663 aa12.92□□□□□ -0.34
CLCN3-210ENST00000515420 ATP13A4Q4VNC1 1196 aa12.92□□□□□ -0.34
CLCN3-210ENST00000515420 NCBP2-AS2Q69YL0 99 aa12.92□□□□□ -0.34
CLCN3-210ENST00000515420 TIGD7Q6NT04 549 aaPredicted RBP12.92□□□□□ -0.34
CLCN3-210ENST00000515420 ABI3BPQ7Z7G0 1075 aa12.92□□□□□ -0.34
CLCN3-210ENST00000515420 SRLQ86TD4 932 aa12.92□□□□□ -0.34
CLCN3-210ENST00000515420 TTC7BQ86TV6 843 aa12.92□□□□□ -0.34
CLCN3-210ENST00000515420 CPNE8Q86YQ8 564 aa12.92□□□□□ -0.34
CLCN3-210ENST00000515420 DCP2Q8IU60 420 aaKnown RBP12.92□□□□□ -0.34
CLCN3-210ENST00000515420 NAXDQ8IW45 347 aa12.92□□□□□ -0.34
CLCN3-210ENST00000515420 TP53INP2Q8IXH6 220 aa12.92□□□□□ -0.34
CLCN3-210ENST00000515420 DEFB124Q8NES8 71 aa12.92□□□□□ -0.34
CLCN3-210ENST00000515420 PCDH19Q8TAB3 1148 aa12.92□□□□□ -0.34
CLCN3-210ENST00000515420 EXOC2Q96KP1 924 aa12.92□□□□□ -0.34
CLCN3-210ENST00000515420 LENG8Q96PV6 779 aaPredicted RBP12.92□□□□□ -0.34
CLCN3-210ENST00000515420 ELF4Q99607 663 aaPredicted RBP12.92□□□□□ -0.34
CLCN3-210ENST00000515420 SLC17A9Q9BYT1 436 aa12.92□□□□□ -0.34
CLCN3-210ENST00000515420 IL21RQ9HBE5 538 aa12.92□□□□□ -0.34
CLCN3-210ENST00000515420 DDX56Q9NY93 547 aaKnown RBP12.92□□□□□ -0.34
CLCN3-210ENST00000515420 IMPACTQ9P2X3 320 aa12.92□□□□□ -0.34
CLCN3-210ENST00000515420 HS3ST3A1Q9Y663 406 aa12.92□□□□□ -0.34
CLCN3-210ENST00000515420 COL5A1P20908 1838 aaPredicted RBP12.92□□□□□ -0.34
CLCN3-210ENST00000515420 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.91□□□□□ -0.34
CLCN3-210ENST00000515420 A0A1W2PQ67 120 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 A6NNZ2 444 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 TMEM110-MUSTN1A8MSY1 372 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 H0Y8X5 98 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 NEMP1O14524 444 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 WNT9AO14904 365 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 SLC31A1O15431 190 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 INSIG1O15503 277 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 SPINT1O43278 529 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 MFSD11O43934 449 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 NDUFA10O95299 355 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 IPO7O95373 1038 aaKnown RBP12.91□□□□□ -0.34
CLCN3-210ENST00000515420 PIGNO95427 931 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 PRLRP16471 622 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 CR2P20023 1033 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 MX2P20592 715 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 XPAP23025 273 aaPredicted RBP12.91□□□□□ -0.34
CLCN3-210ENST00000515420 KDELR1P24390 212 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 GARSP41250 739 aaKnown RBP12.91□□□□□ -0.34
CLCN3-210ENST00000515420 RGRP47804 291 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 RXRGP48443 463 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 BCL2L1Q07817 233 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 SLC10A7Q0GE19 358 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 GALNT2Q10471 571 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 SGCGQ13326 291 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 IFI16Q16666 785 aaKnown RBP12.91□□□□□ -0.34
CLCN3-210ENST00000515420 UGP2Q16851 508 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 SEL1L3Q68CR1 1132 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 GLRX5Q86SX6 157 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 RHOT1Q8IXI2 618 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 BAHD1Q8TBE0 780 aaPredicted RBP12.91□□□□□ -0.34
CLCN3-210ENST00000515420 ECHDC3Q96DC8 303 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 KLHDC7BQ96G42 594 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 TSGA13Q96PP4 275 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 MGME1Q9BQP7 344 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 GPR27Q9NS67 375 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 HAUS2Q9NVX0 235 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 AMACRQ9UHK6 382 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 PCDHA13Q9Y5I0 950 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 LRRK1Q38SD2 2015 aa12.91□□□□□ -0.34
CLCN3-210ENST00000515420 LRRD1A4D1F6 860 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 CFAP69A5D8W1 941 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 C3orf70A6NLC5 250 aaPredicted RBP12.9□□□□□ -0.34
CLCN3-210ENST00000515420 TRAFD1O14545 582 aaPredicted RBP12.9□□□□□ -0.34
CLCN3-210ENST00000515420 TOR1BO14657 336 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 GIPC1O14908 333 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 MUSKO15146 869 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 PSTPIP1O43586 416 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 SH3BP5O60239 455 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 BUB1BO60566 1050 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms