RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 AMPD1P23109 780 aa24.78■■□□□ 1.56
SNF8-213ENST00000514929 IL10RBQ08334 325 aa24.78■■□□□ 1.56
SNF8-213ENST00000514929 TSR1Q2NL82 804 aaKnown RBP24.78■■□□□ 1.56
SNF8-213ENST00000514929 CFAP58Q5T655 872 aa24.78■■□□□ 1.56
SNF8-213ENST00000514929 TXNRD3NBQ6F5E7 133 aa24.78■■□□□ 1.56
SNF8-213ENST00000514929 Q6ZSR6 202 aa24.78■■□□□ 1.56
SNF8-213ENST00000514929 POLNQ7Z5Q5 900 aa24.78■■□□□ 1.56
SNF8-213ENST00000514929 ZNF564Q8TBZ8 553 aaPredicted RBP24.78■■□□□ 1.56
SNF8-213ENST00000514929 TEKT4Q8WW24 435 aa24.78■■□□□ 1.56
SNF8-213ENST00000514929 GATA6Q92908 595 aa24.78■■□□□ 1.56
SNF8-213ENST00000514929 CNDP2Q96KP4 475 aaKnown RBP24.78■■□□□ 1.56
SNF8-213ENST00000514929 BMFQ96LC9 184 aa24.78■■□□□ 1.56
SNF8-213ENST00000514929 KLHL11Q9NVR0 708 aa24.78■■□□□ 1.56
SNF8-213ENST00000514929 IPO11Q9UI26 975 aaKnown RBP24.78■■□□□ 1.56
SNF8-213ENST00000514929 FAM221BA6H8Z2 402 aa24.77■■□□□ 1.56
SNF8-213ENST00000514929 POM121BA6NF01 834 aa24.77■■□□□ 1.56
SNF8-213ENST00000514929 FPGTO14772 594 aa24.77■■□□□ 1.56
SNF8-213ENST00000514929 TIMP2P16035 220 aa24.77■■□□□ 1.56
SNF8-213ENST00000514929 SLC25A11Q02978 314 aaKnown RBP24.77■■□□□ 1.56
SNF8-213ENST00000514929 RFTN1Q14699 578 aaPredicted RBP24.77■■□□□ 1.56
SNF8-213ENST00000514929 TMCO3Q6UWJ1 677 aa24.77■■□□□ 1.56
SNF8-213ENST00000514929 KYAT3Q6YP21 454 aaKnown RBP24.77■■□□□ 1.56
SNF8-213ENST00000514929 ARHGAP36Q6ZRI8 547 aa24.77■■□□□ 1.56
SNF8-213ENST00000514929 DCP2Q8IU60 420 aaKnown RBP24.77■■□□□ 1.56
SNF8-213ENST00000514929 TSEN2Q8NCE0 465 aaKnown RBP24.77■■□□□ 1.56
SNF8-213ENST00000514929 CXorf40AQ8TE69 158 aa24.77■■□□□ 1.56
SNF8-213ENST00000514929 ASB12Q8WXK4 309 aa24.77■■□□□ 1.56
SNF8-213ENST00000514929 CTNNBL1Q8WYA6 563 aaPredicted RBP24.77■■□□□ 1.56
SNF8-213ENST00000514929 LENG8Q96PV6 779 aaPredicted RBP24.77■■□□□ 1.56
SNF8-213ENST00000514929 CSPG4P5Q96PW8 444 aa24.77■■□□□ 1.56
SNF8-213ENST00000514929 DNAJC7Q99615 494 aa24.77■■□□□ 1.56
SNF8-213ENST00000514929 SUV39H2Q9H5I1 410 aa24.77■■□□□ 1.56
SNF8-213ENST00000514929 PCDH18Q9HCL0 1135 aa24.77■■□□□ 1.56
SNF8-213ENST00000514929 CTTNBP2NLQ9P2B4 639 aa24.77■■□□□ 1.56
SNF8-213ENST00000514929 NENFQ9UMX5 172 aa24.77■■□□□ 1.56
SNF8-213ENST00000514929 MAP1BP46821 2468 aaKnown RBP24.76■■□□□ 1.55
SNF8-213ENST00000514929 ENC1O14682 589 aa24.76■■□□□ 1.55
SNF8-213ENST00000514929 SUOXP51687 545 aa24.76■■□□□ 1.55
SNF8-213ENST00000514929 KRT81Q14533 505 aa24.76■■□□□ 1.55
SNF8-213ENST00000514929 SLC18A3Q16572 532 aa24.76■■□□□ 1.55
SNF8-213ENST00000514929 HADHQ16836 314 aaKnown RBP24.76■■□□□ 1.55
SNF8-213ENST00000514929 KANSL1Q7Z3B3 1105 aa24.76■■□□□ 1.55
SNF8-213ENST00000514929 SRLQ86TD4 932 aa24.76■■□□□ 1.55
SNF8-213ENST00000514929 VSTM4Q8IW00 320 aa24.76■■□□□ 1.55
SNF8-213ENST00000514929 TP53INP2Q8IXH6 220 aa24.76■■□□□ 1.55
SNF8-213ENST00000514929 SLC22A18ASQ8N1D0 253 aa24.76■■□□□ 1.55
SNF8-213ENST00000514929 HCAR2Q8TDS4 363 aa24.76■■□□□ 1.55
SNF8-213ENST00000514929 ZNF641Q96N77 438 aaPredicted RBP24.76■■□□□ 1.55
SNF8-213ENST00000514929 TUBGCP5Q96RT8 1024 aa24.76■■□□□ 1.55
SNF8-213ENST00000514929 KLF6Q99612 283 aaPredicted RBP24.76■■□□□ 1.55
SNF8-213ENST00000514929 TMEM121BQ9BXQ6 578 aaPredicted RBP24.76■■□□□ 1.55
SNF8-213ENST00000514929 COL5A1P20908 1838 aaPredicted RBP24.76■■□□□ 1.55
SNF8-213ENST00000514929 FRYQ5TBA9 3013 aa24.75■■□□□ 1.55
SNF8-213ENST00000514929 EPG5Q9HCE0 2579 aa24.75■■□□□ 1.55
SNF8-213ENST00000514929 MMP20O60882 483 aa24.75■■□□□ 1.55
SNF8-213ENST00000514929 TM7SF2O76062 418 aa24.75■■□□□ 1.55
SNF8-213ENST00000514929 DKK1O94907 266 aa24.75■■□□□ 1.55
SNF8-213ENST00000514929 H2AFZP0C0S5 128 aa24.75■■□□□ 1.55
SNF8-213ENST00000514929 ITIH2P19823 946 aa24.75■■□□□ 1.55
SNF8-213ENST00000514929 RABIFP47224 123 aa24.75■■□□□ 1.55
SNF8-213ENST00000514929 RGRP47804 291 aa24.75■■□□□ 1.55
SNF8-213ENST00000514929 CSNK1DP48730 415 aa24.75■■□□□ 1.55
SNF8-213ENST00000514929 ELP6Q0PNE2 266 aa24.75■■□□□ 1.55
SNF8-213ENST00000514929 H2AFVQ71UI9 128 aa24.75■■□□□ 1.55
SNF8-213ENST00000514929 DENND6BQ8NEG7 585 aa24.75■■□□□ 1.55
SNF8-213ENST00000514929 WRAP53Q9BUR4 548 aaKnown RBP24.75■■□□□ 1.55
SNF8-213ENST00000514929 ATP13A3Q9H7F0 1226 aa24.75■■□□□ 1.55
SNF8-213ENST00000514929 ETNK2Q9NVF9 386 aa24.75■■□□□ 1.55
SNF8-213ENST00000514929 UVRAGQ9P2Y5 699 aa24.75■■□□□ 1.55
SNF8-213ENST00000514929 AKR1B10O60218 316 aa24.74■■□□□ 1.55
SNF8-213ENST00000514929 BUB1BO60566 1050 aaPredicted RBP24.74■■□□□ 1.55
SNF8-213ENST00000514929 SERPINA4P29622 427 aa24.74■■□□□ 1.55
SNF8-213ENST00000514929 CDH6P55285 790 aa24.74■■□□□ 1.55
SNF8-213ENST00000514929 TMCO4Q5TGY1 634 aa24.74■■□□□ 1.55
SNF8-213ENST00000514929 CAMK1DQ8IU85 385 aa24.74■■□□□ 1.55
SNF8-213ENST00000514929 PAF1Q8N7H5 531 aa24.74■■□□□ 1.55
SNF8-213ENST00000514929 IFT43Q96FT9 208 aa24.74■■□□□ 1.55
SNF8-213ENST00000514929 ZNF599Q96NL3 588 aa24.74■■□□□ 1.55
SNF8-213ENST00000514929 C1QTNF7Q9BXJ2 289 aa24.74■■□□□ 1.55
SNF8-213ENST00000514929 PACSIN1Q9BY11 444 aa24.74■■□□□ 1.55
SNF8-213ENST00000514929 SEPT3Q9UH03 358 aa24.74■■□□□ 1.55
SNF8-213ENST00000514929 SPEGQ15772 3267 aa24.74■■□□□ 1.55
SNF8-213ENST00000514929 SSU72P8A0A1W2PR75 194 aa24.73■■□□□ 1.55
SNF8-213ENST00000514929 TSPAN11A1L157 253 aa24.73■■□□□ 1.55
SNF8-213ENST00000514929 TMEM8BA6NDV4 472 aa24.73■■□□□ 1.55
SNF8-213ENST00000514929 SERPINB6P35237 376 aa24.73■■□□□ 1.55
SNF8-213ENST00000514929 GJC1P36383 396 aa24.73■■□□□ 1.55
SNF8-213ENST00000514929 RENBPP51606 427 aa24.73■■□□□ 1.55
SNF8-213ENST00000514929 NSUN2Q08J23 767 aaKnown RBP eCLIP24.73■■□□□ 1.55
SNF8-213ENST00000514929 DNAJC3Q13217 504 aa24.73■■□□□ 1.55
SNF8-213ENST00000514929 LBRQ14739 615 aaKnown RBP24.73■■□□□ 1.55
SNF8-213ENST00000514929 UGP2Q16851 508 aa24.73■■□□□ 1.55
SNF8-213ENST00000514929 ERAP2Q6P179 960 aa24.73■■□□□ 1.55
SNF8-213ENST00000514929 BRAT1Q6PJG6 821 aa24.73■■□□□ 1.55
SNF8-213ENST00000514929 ABHD10Q9NUJ1 306 aa24.73■■□□□ 1.55
SNF8-213ENST00000514929 DNAJC28Q9NX36 388 aa24.73■■□□□ 1.55
SNF8-213ENST00000514929 AKAP13Q12802 2813 aa24.72■■□□□ 1.55
SNF8-213ENST00000514929 PROSCO94903 275 aa24.72■■□□□ 1.55
SNF8-213ENST00000514929 DGKAP23743 735 aa24.72■■□□□ 1.55
SNF8-213ENST00000514929 SCNN1BP51168 640 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms