RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 MYO1FO00160 1098 aa23.31■■□□□ 1.32
CLDND1-230ENST00000514537 DFFAO00273 331 aa23.31■■□□□ 1.32
CLDND1-230ENST00000514537 PALMO75781 387 aa23.31■■□□□ 1.32
CLDND1-230ENST00000514537 LDOC1O95751 146 aaPredicted RBP23.31■■□□□ 1.32
CLDND1-230ENST00000514537 ARL4AP40617 200 aa23.31■■□□□ 1.32
CLDND1-230ENST00000514537 CSNK1DP48730 415 aa23.31■■□□□ 1.32
CLDND1-230ENST00000514537 IL10RBQ08334 325 aa23.31■■□□□ 1.32
CLDND1-230ENST00000514537 TRIM14Q14142 442 aa23.31■■□□□ 1.32
CLDND1-230ENST00000514537 GRM3Q14832 879 aa23.31■■□□□ 1.32
CLDND1-230ENST00000514537 TXNRD3NBQ6F5E7 133 aa23.31■■□□□ 1.32
CLDND1-230ENST00000514537 KYAT3Q6YP21 454 aaKnown RBP23.31■■□□□ 1.32
CLDND1-230ENST00000514537 ARHGAP36Q6ZRI8 547 aa23.31■■□□□ 1.32
CLDND1-230ENST00000514537 DCP2Q8IU60 420 aaKnown RBP23.31■■□□□ 1.32
CLDND1-230ENST00000514537 SLC22A18ASQ8N1D0 253 aa23.31■■□□□ 1.32
CLDND1-230ENST00000514537 KDF1Q8NAX2 398 aaPredicted RBP23.31■■□□□ 1.32
CLDND1-230ENST00000514537 OR8K1Q8NGG5 319 aa23.31■■□□□ 1.32
CLDND1-230ENST00000514537 HSPH1Q92598 858 aa23.31■■□□□ 1.32
CLDND1-230ENST00000514537 DNAJC7Q99615 494 aa23.31■■□□□ 1.32
CLDND1-230ENST00000514537 CALN1Q9BXU9 219 aa23.31■■□□□ 1.32
CLDND1-230ENST00000514537 SUV39H2Q9H5I1 410 aa23.31■■□□□ 1.32
CLDND1-230ENST00000514537 GPR27Q9NS67 375 aa23.31■■□□□ 1.32
CLDND1-230ENST00000514537 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.31■■□□□ 1.32
CLDND1-230ENST00000514537 IPO11Q9UI26 975 aaKnown RBP23.31■■□□□ 1.32
CLDND1-230ENST00000514537 KMT2BQ9UMN6 2715 aaPredicted RBP23.3■■□□□ 1.32
CLDND1-230ENST00000514537 IGF2RP11717 2491 aa23.3■■□□□ 1.32
CLDND1-230ENST00000514537 BUB1BO60566 1050 aaPredicted RBP23.3■■□□□ 1.32
CLDND1-230ENST00000514537 PIGNO95427 931 aa23.3■■□□□ 1.32
CLDND1-230ENST00000514537 ITIH2P19823 946 aa23.3■■□□□ 1.32
CLDND1-230ENST00000514537 AMPD1P23109 780 aa23.3■■□□□ 1.32
CLDND1-230ENST00000514537 SUOXP51687 545 aa23.3■■□□□ 1.32
CLDND1-230ENST00000514537 SLC25A11Q02978 314 aaKnown RBP23.3■■□□□ 1.32
CLDND1-230ENST00000514537 RFTN1Q14699 578 aaPredicted RBP23.3■■□□□ 1.32
CLDND1-230ENST00000514537 LRRC73Q5JTD7 316 aa23.3■■□□□ 1.32
CLDND1-230ENST00000514537 TP53INP2Q8IXH6 220 aa23.3■■□□□ 1.32
CLDND1-230ENST00000514537 TSEN2Q8NCE0 465 aaKnown RBP23.3■■□□□ 1.32
CLDND1-230ENST00000514537 IFT43Q96FT9 208 aa23.3■■□□□ 1.32
CLDND1-230ENST00000514537 CNDP2Q96KP4 475 aaKnown RBP23.3■■□□□ 1.32
CLDND1-230ENST00000514537 ZNF641Q96N77 438 aaPredicted RBP23.3■■□□□ 1.32
CLDND1-230ENST00000514537 CSPG4P5Q96PW8 444 aa23.3■■□□□ 1.32
CLDND1-230ENST00000514537 SP110Q9HB58 689 aa23.3■■□□□ 1.32
CLDND1-230ENST00000514537 TSPAN11A1L157 253 aa23.29■■□□□ 1.32
CLDND1-230ENST00000514537 ENC1O14682 589 aa23.29■■□□□ 1.32
CLDND1-230ENST00000514537 FPGTO14772 594 aa23.29■■□□□ 1.32
CLDND1-230ENST00000514537 SDC3O75056 442 aa23.29■■□□□ 1.32
CLDND1-230ENST00000514537 RGRP47804 291 aa23.29■■□□□ 1.32
CLDND1-230ENST00000514537 NSUN2Q08J23 767 aaKnown RBP eCLIP23.29■■□□□ 1.32
CLDND1-230ENST00000514537 SLC18A3Q16572 532 aa23.29■■□□□ 1.32
CLDND1-230ENST00000514537 ASTE1Q2TB18 679 aaPredicted RBP23.29■■□□□ 1.32
CLDND1-230ENST00000514537 CCNI2Q6ZMN8 369 aaPredicted RBP23.29■■□□□ 1.32
CLDND1-230ENST00000514537 TMPRSS7Q7RTY8 843 aa23.29■■□□□ 1.32
CLDND1-230ENST00000514537 PTAR1Q7Z6K3 402 aaPredicted RBP23.29■■□□□ 1.32
CLDND1-230ENST00000514537 SRLQ86TD4 932 aa23.29■■□□□ 1.32
CLDND1-230ENST00000514537 VSTM4Q8IW00 320 aa23.29■■□□□ 1.32
CLDND1-230ENST00000514537 SLC25A45Q8N413 288 aa23.29■■□□□ 1.32
CLDND1-230ENST00000514537 DENND6BQ8NEG7 585 aa23.29■■□□□ 1.32
CLDND1-230ENST00000514537 CENPTQ96BT3 561 aa23.29■■□□□ 1.32
CLDND1-230ENST00000514537 TUBGCP5Q96RT8 1024 aa23.29■■□□□ 1.32
CLDND1-230ENST00000514537 PCDH18Q9HCL0 1135 aa23.29■■□□□ 1.32
CLDND1-230ENST00000514537 ETNK2Q9NVF9 386 aa23.29■■□□□ 1.32
CLDND1-230ENST00000514537 PCDHGA1Q9Y5H4 931 aa23.29■■□□□ 1.32
CLDND1-230ENST00000514537 TMEM8BA6NDV4 472 aa23.28■■□□□ 1.32
CLDND1-230ENST00000514537 MMP20O60882 483 aa23.28■■□□□ 1.32
CLDND1-230ENST00000514537 RABIFP47224 123 aa23.28■■□□□ 1.32
CLDND1-230ENST00000514537 TMEM52BQ4KMG9 183 aa23.28■■□□□ 1.32
CLDND1-230ENST00000514537 TMCO3Q6UWJ1 677 aa23.28■■□□□ 1.32
CLDND1-230ENST00000514537 RNF214Q8ND24 703 aa23.28■■□□□ 1.32
CLDND1-230ENST00000514537 ZNF564Q8TBZ8 553 aaPredicted RBP23.28■■□□□ 1.32
CLDND1-230ENST00000514537 TSC1Q92574 1164 aa23.28■■□□□ 1.32
CLDND1-230ENST00000514537 CINPQ9BW66 212 aaPredicted RBP23.28■■□□□ 1.32
CLDND1-230ENST00000514537 ARID1BQ8NFD5 2236 aaPredicted RBP23.27■■□□□ 1.32
CLDND1-230ENST00000514537 SSU72P8A0A1W2PR75 194 aa23.27■■□□□ 1.32
CLDND1-230ENST00000514537 DGKAP23743 735 aa23.27■■□□□ 1.32
CLDND1-230ENST00000514537 FZD2Q14332 565 aa23.27■■□□□ 1.32
CLDND1-230ENST00000514537 UGP2Q16851 508 aa23.27■■□□□ 1.32
CLDND1-230ENST00000514537 BRAT1Q6PJG6 821 aa23.27■■□□□ 1.32
CLDND1-230ENST00000514537 CAMK1DQ8IU85 385 aa23.27■■□□□ 1.32
CLDND1-230ENST00000514537 FAM71BQ8TC56 605 aa23.27■■□□□ 1.32
CLDND1-230ENST00000514537 CXorf40AQ8TE69 158 aa23.27■■□□□ 1.32
CLDND1-230ENST00000514537 ZNF599Q96NL3 588 aa23.27■■□□□ 1.32
CLDND1-230ENST00000514537 PSKH2Q96QS6 385 aa23.27■■□□□ 1.32
CLDND1-230ENST00000514537 UVRAGQ9P2Y5 699 aa23.27■■□□□ 1.32
CLDND1-230ENST00000514537 TP53BP1Q12888 1972 aaPredicted RBP23.27■■□□□ 1.32
CLDND1-230ENST00000514537 SPTY2D1-AS1A0A0U1RR47 76 aa23.26■■□□□ 1.31
CLDND1-230ENST00000514537 MUSKO15146 869 aa23.26■■□□□ 1.31
CLDND1-230ENST00000514537 TM7SF2O76062 418 aa23.26■■□□□ 1.31
CLDND1-230ENST00000514537 H2AFZP0C0S5 128 aa23.26■■□□□ 1.31
CLDND1-230ENST00000514537 XPAP23025 273 aaPredicted RBP23.26■■□□□ 1.31
CLDND1-230ENST00000514537 IL4RP24394 825 aa23.26■■□□□ 1.31
CLDND1-230ENST00000514537 PFN3P60673 137 aa23.26■■□□□ 1.31
CLDND1-230ENST00000514537 ELP6Q0PNE2 266 aa23.26■■□□□ 1.31
CLDND1-230ENST00000514537 DNAJC3Q13217 504 aa23.26■■□□□ 1.31
CLDND1-230ENST00000514537 LBRQ14739 615 aaKnown RBP23.26■■□□□ 1.31
CLDND1-230ENST00000514537 HADHQ16836 314 aaKnown RBP23.26■■□□□ 1.31
CLDND1-230ENST00000514537 CCDC157Q569K6 752 aa23.26■■□□□ 1.31
CLDND1-230ENST00000514537 H2AFVQ71UI9 128 aa23.26■■□□□ 1.31
CLDND1-230ENST00000514537 PACSIN1Q9BY11 444 aa23.26■■□□□ 1.31
CLDND1-230ENST00000514537 ATP13A3Q9H7F0 1226 aa23.26■■□□□ 1.31
CLDND1-230ENST00000514537 CAAP1Q9H8G2 361 aa23.26■■□□□ 1.31
CLDND1-230ENST00000514537 PCDH12Q9NPG4 1184 aa23.26■■□□□ 1.31
CLDND1-230ENST00000514537 ZNHIT6Q9NWK9 470 aaKnown RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms