RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 ATG14Q6ZNE5 492 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 ANKS3Q6ZW76 656 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 TAGAPQ8N103 731 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 LRRC52Q8N7C0 313 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 C1orf127Q8N9H9 656 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 UROC1Q96N76 676 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 DGCR6LQ9BY27 220 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 PRDM12Q9H4Q4 367 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 SPASTQ9UBP0 616 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 SFMBT1Q9UHJ3 866 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 CRYL1Q9Y2S2 319 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 ARFGEF2Q9Y6D5 1785 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 RBP1P09455 135 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 IL12RB1P42701 662 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 FASTKD3Q14CZ7 662 aaKnown RBP13.24□□□□□ -0.29
TCOF1-213ENST00000514442 ZNF423Q2M1K9 1284 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 POC5Q8NA72 575 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 MINDY2Q8NBR6 621 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 OR9Q1Q8NGQ5 310 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 LENG9Q96B70 501 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 PTCD3Q96EY7 689 aaKnown RBP13.24□□□□□ -0.29
TCOF1-213ENST00000514442 EMILIN2Q9BXX0 1053 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 IGFLR1Q9H665 355 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 COL1A2P08123 1366 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 MED26O95402 600 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 PIK3R1P27986 724 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 SOX6P35712 828 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 GABRB2P47870 512 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 PLK1P53350 603 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 MRPS5P82675 430 aaKnown RBP13.24□□□□□ -0.29
TCOF1-213ENST00000514442 MBTD1Q05BQ5 628 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 MPP2Q14168 576 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 PRKD1Q15139 912 aaPredicted RBP13.24□□□□□ -0.29
TCOF1-213ENST00000514442 EFL1Q7Z2Z2 1120 aaKnown RBP13.24□□□□□ -0.29
TCOF1-213ENST00000514442 RORBQ92753 470 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 SLCO2A1Q92959 643 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 UTP4Q969X6 686 aaKnown RBP13.24□□□□□ -0.29
TCOF1-213ENST00000514442 CCDC126Q96EE4 140 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 PCDH12Q9NPG4 1184 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 HPS4Q9NQG7 708 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 NCKIPSDQ9NZQ3 722 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 GIT1Q9Y2X7 761 aa13.24□□□□□ -0.29
TCOF1-213ENST00000514442 M0R2N6 131 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 UBDO15205 165 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 FKTNO75072 461 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 ALOX12P18054 663 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 PRDX6P30041 224 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 ZNF829Q3KNS6 432 aaPredicted RBP13.23□□□□□ -0.29
TCOF1-213ENST00000514442 CENPSQ8N2Z9 138 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 PCDH20Q8N6Y1 951 aaKnown RBP13.23□□□□□ -0.29
TCOF1-213ENST00000514442 RCN3Q96D15 328 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 C6orf62Q9GZU0 229 aaPredicted RBP13.23□□□□□ -0.29
TCOF1-213ENST00000514442 C1orf21Q9H246 121 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 CDHR5Q9HBB8 845 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 SYTL2Q9HCH5 934 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 DNAJC28Q9NX36 388 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 MAGEB3O15480 346 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 UGT1A9O60656 530 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 LDLRP01130 860 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 UGT1A6P19224 532 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 UGT1A1P22309 533 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 UGT1A4P22310 534 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 PSMB9P28065 219 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 UGT1A3P35503 534 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 UGT1A5P35504 534 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 CD86P42081 329 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 PSME3P61289 254 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 ARMCX4Q5H9R4 360 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 PRMT9Q6P2P2 845 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 RRM2BQ7LG56 351 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 DENND1CQ8IV53 801 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 HM13Q8TCT9 377 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 NRG4Q8WWG1 115 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 PLEKHA8Q96JA3 519 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 CPNE1Q99829 537 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 BDH2Q9BUT1 245 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 DUSP16Q9BY84 665 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 UGT1A7Q9HAW7 530 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 UGT1A10Q9HAW8 530 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 UGT1A8Q9HAW9 530 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 ABCB10Q9NRK6 738 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 LRRC37A3O60309 1634 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 TMEM191CA6NGB0 347 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 NOTOA8MTQ0 251 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 PDZK1P1A8MUH7 402 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 MRASO14807 208 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 MPOP05164 745 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 ADSSP30520 456 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 HALP42357 657 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 ENTPD1P49961 510 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 PSMA8Q8TAA3 256 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 C7orf43Q8WVR3 580 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 SLC44A1Q8WWI5 657 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 ZNF558Q96NG5 402 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 MIPEPQ99797 713 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 BBS2Q9BXC9 721 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 TCRBV9S1A1TA0A576 114 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 AVILO75366 819 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 ASGR1P07306 291 aa13.23□□□□□ -0.29
TCOF1-213ENST00000514442 BBS12Q6ZW61 710 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms