RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 RNF157Q96PX1 679 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 MGME1Q9BQP7 344 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 ZDHHC6Q9H6R6 413 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 FNDC3AQ9Y2H6 1198 aaKnown RBP9.83□□□□□ -0.84
RNF4-221ENST00000513643 HS3ST3A1Q9Y663 406 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 EPG5Q9HCE0 2579 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 A0A1B0GTQ1 180 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 SOWAHDA6NJG2 315 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 H0Y8X5 98 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 TLR4O00206 839 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 DFFAO00273 331 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 GIPC1O14908 333 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 PJA2O43164 708 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 HTRA2O43464 458 aaPredicted RBP9.82□□□□□ -0.84
RNF4-221ENST00000513643 DFNA5O60443 496 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 PALMO75781 387 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 NDUFA10O95299 355 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 CER1O95813 267 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 ADRB1P08588 477 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 COMTP21964 271 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 SERPINB6P35237 376 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 GARSP41250 739 aaKnown RBP9.82□□□□□ -0.84
RNF4-221ENST00000513643 RPS21P63220 83 aaKnown RBP9.82□□□□□ -0.84
RNF4-221ENST00000513643 HNRNPDQ14103 355 aaKnown RBP9.82□□□□□ -0.84
RNF4-221ENST00000513643 IHHQ14623 411 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 LBRQ14739 615 aaKnown RBP9.82□□□□□ -0.84
RNF4-221ENST00000513643 AGERQ15109 404 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 TEAD4Q15561 434 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 TMEM52BQ4KMG9 183 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 SETMARQ53H47 684 aaPredicted RBP9.82□□□□□ -0.84
RNF4-221ENST00000513643 PPM1JQ5JR12 505 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 SLC9A4Q6AI14 798 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 FBXL19Q6PCT2 694 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 LAYNQ6UX15 382 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 KANSL1Q7Z3B3 1105 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 GLRX5Q86SX6 157 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 MAP7D3Q8IWC1 876 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 PLD5Q8N7P1 536 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 KCTD6Q8NC69 237 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 SNX19Q92543 992 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 CENPTQ96BT3 561 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 FEM1CQ96JP0 617 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 BMFQ96LC9 184 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 GTPBP2Q9BX10 602 aaKnown RBP9.82□□□□□ -0.84
RNF4-221ENST00000513643 SUV39H2Q9H5I1 410 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 GAREM1Q9H706 876 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 DYRK4Q9NR20 520 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 DTLQ9NZJ0 730 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 IMPACTQ9P2X3 320 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 SEPT3Q9UH03 358 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 GGT7Q9UJ14 662 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 TFR2Q9UP52 801 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 ALG6Q9Y672 507 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 TRPM6Q9BX84 2022 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 ADAMTS9Q9P2N4 1935 aa9.82□□□□□ -0.84
RNF4-221ENST00000513643 FREM2Q5SZK8 3169 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 CFAP69A5D8W1 941 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 MATN3O15232 486 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 RAD51BO15315 384 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 MFSD11O43934 449 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 DKK1O94907 266 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 PIGNO95427 931 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 ITIH2P19823 946 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 HNRNPA2B1P22626 353 aaKnown RBP9.81□□□□□ -0.84
RNF4-221ENST00000513643 CCNCP24863 283 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 MAT2AP31153 395 aaKnown RBP9.81□□□□□ -0.84
RNF4-221ENST00000513643 CYLC1P35663 651 aaPredicted RBP9.81□□□□□ -0.84
RNF4-221ENST00000513643 HSPA9P38646 679 aaKnown RBP9.81□□□□□ -0.84
RNF4-221ENST00000513643 RENBPP51606 427 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 ATXN3P54252 364 aaPredicted RBP9.81□□□□□ -0.84
RNF4-221ENST00000513643 AP1S1P61966 158 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 FAM193AP78312 1265 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 GBE1Q04446 702 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 RAD51Q06609 339 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 KRT81Q14533 505 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 UGP2Q16851 508 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 RALGPS1Q5JS13 557 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 N4BP2L1Q5TBK1 243 aaPredicted RBP9.81□□□□□ -0.84
RNF4-221ENST00000513643 C11orf63Q6NUN7 778 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 BRAT1Q6PJG6 821 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 GCNT7Q6ZNI0 430 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 TTC7BQ86TV6 843 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 ZNF354CQ86Y25 554 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 CAMK1DQ8IU85 385 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 RYBPQ8N488 228 aaPredicted RBP9.81□□□□□ -0.84
RNF4-221ENST00000513643 FAM174AQ8TBP5 190 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 SAP25Q8TEE9 199 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 EXOC2Q96KP1 924 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 CALR3Q96L12 384 aaKnown RBP9.81□□□□□ -0.84
RNF4-221ENST00000513643 OLFM3Q96PB7 478 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 NUDCD1Q96RS6 583 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 ELF4Q99607 663 aaPredicted RBP9.81□□□□□ -0.84
RNF4-221ENST00000513643 SLC17A9Q9BYT1 436 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 LACRTQ9GZZ8 138 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 SP110Q9HB58 689 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 TM7SF3Q9NS93 570 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 AMACRQ9UHK6 382 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 PCOLCE2Q9UKZ9 415 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 PPIL1Q9Y3C6 166 aa9.81□□□□□ -0.84
RNF4-221ENST00000513643 AKAP13Q12802 2813 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms