RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 NID1P14543 1247 aa12.55□□□□□ -0.4
SDHA-215ENST00000512962 NME1P15531 152 aaKnown RBP12.55□□□□□ -0.4
SDHA-215ENST00000512962 TRIM21P19474 475 aaKnown RBP12.55□□□□□ -0.4
SDHA-215ENST00000512962 NUDT1P36639 197 aa12.55□□□□□ -0.4
SDHA-215ENST00000512962 PITX1P78337 314 aaPredicted RBP12.55□□□□□ -0.4
SDHA-215ENST00000512962 BST2Q10589 180 aaKnown RBP12.55□□□□□ -0.4
SDHA-215ENST00000512962 LCE2CQ5TA81 110 aa12.55□□□□□ -0.4
SDHA-215ENST00000512962 RNF219Q5W0B1 726 aaPredicted RBP12.55□□□□□ -0.4
SDHA-215ENST00000512962 CXorf57Q6NSI4 855 aaKnown RBP12.55□□□□□ -0.4
SDHA-215ENST00000512962 PMF1Q6P1K2 205 aa12.55□□□□□ -0.4
SDHA-215ENST00000512962 PTAR1Q7Z6K3 402 aaPredicted RBP12.55□□□□□ -0.4
SDHA-215ENST00000512962 HORMAD1Q86X24 394 aa12.55□□□□□ -0.4
SDHA-215ENST00000512962 LINC00301Q8NCQ3 95 aa12.55□□□□□ -0.4
SDHA-215ENST00000512962 GPBAR1Q8TDU6 330 aa12.55□□□□□ -0.4
SDHA-215ENST00000512962 DQX1Q8TE96 717 aaKnown RBP12.55□□□□□ -0.4
SDHA-215ENST00000512962 OR8D1Q8WZ84 308 aa12.55□□□□□ -0.4
SDHA-215ENST00000512962 TFAP2BQ92481 460 aa12.55□□□□□ -0.4
SDHA-215ENST00000512962 SEMA3CQ99985 751 aa12.55□□□□□ -0.4
SDHA-215ENST00000512962 FOXP3Q9BZS1 431 aa12.55□□□□□ -0.4
SDHA-215ENST00000512962 IMPG2Q9BZV3 1241 aa12.55□□□□□ -0.4
SDHA-215ENST00000512962 LRRC27Q9C0I9 530 aa12.55□□□□□ -0.4
SDHA-215ENST00000512962 CUEDC2Q9H467 287 aa12.55□□□□□ -0.4
SDHA-215ENST00000512962 USP29Q9HBJ7 922 aa12.55□□□□□ -0.4
SDHA-215ENST00000512962 PREBQ9HCU5 417 aa12.55□□□□□ -0.4
SDHA-215ENST00000512962 LRRK1Q38SD2 2015 aa12.55□□□□□ -0.4
SDHA-215ENST00000512962 SDK2Q58EX2 2172 aa12.54□□□□□ -0.4
SDHA-215ENST00000512962 BLACEA4D250 179 aa12.54□□□□□ -0.4
SDHA-215ENST00000512962 K7ELQ4 463 aaPredicted RBP12.54□□□□□ -0.4
SDHA-215ENST00000512962 O00370 1275 aa12.54□□□□□ -0.4
SDHA-215ENST00000512962 GCATO75600 419 aa12.54□□□□□ -0.4
SDHA-215ENST00000512962 CSF2P04141 144 aa12.54□□□□□ -0.4
SDHA-215ENST00000512962 CELA2BP08218 269 aaPredicted RBP12.54□□□□□ -0.4
SDHA-215ENST00000512962 HNRNPA2B1P22626 353 aaKnown RBP12.54□□□□□ -0.4
SDHA-215ENST00000512962 AMPD1P23109 780 aa12.54□□□□□ -0.4
SDHA-215ENST00000512962 UGT1A5P35504 534 aa12.54□□□□□ -0.4
SDHA-215ENST00000512962 SETDB1Q15047 1291 aa12.54□□□□□ -0.4
SDHA-215ENST00000512962 LYPD4Q6UWN0 246 aa12.54□□□□□ -0.4
SDHA-215ENST00000512962 TAC4Q86UU9 113 aa12.54□□□□□ -0.4
SDHA-215ENST00000512962 UNC45BQ8IWX7 931 aa12.54□□□□□ -0.4
SDHA-215ENST00000512962 SIX6OS1Q8N1H7 587 aa12.54□□□□□ -0.4
SDHA-215ENST00000512962 GOLGA5Q8TBA6 731 aa12.54□□□□□ -0.4
SDHA-215ENST00000512962 KCTD13Q8WZ19 329 aa12.54□□□□□ -0.4
SDHA-215ENST00000512962 AZIN2Q96A70 460 aa12.54□□□□□ -0.4
SDHA-215ENST00000512962 ANAPC16Q96DE5 110 aa12.54□□□□□ -0.4
SDHA-215ENST00000512962 PPP1R13BQ96KQ4 1090 aa12.54□□□□□ -0.4
SDHA-215ENST00000512962 CCDC3Q9BQI4 270 aa12.54□□□□□ -0.4
SDHA-215ENST00000512962 SYNDIG1Q9H7V2 258 aa12.54□□□□□ -0.4
SDHA-215ENST00000512962 CNGB3Q9NQW8 809 aa12.54□□□□□ -0.4
SDHA-215ENST00000512962 KCNK4Q9NYG8 393 aa12.54□□□□□ -0.4
SDHA-215ENST00000512962 NAALADL1Q9UQQ1 740 aa12.54□□□□□ -0.4
SDHA-215ENST00000512962 ICE1Q9Y2F5 2266 aa12.54□□□□□ -0.4
SDHA-215ENST00000512962 PVALEFA0A1B0GWK0 134 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 NTN3O00634 580 aaPredicted RBP12.53□□□□□ -0.4
SDHA-215ENST00000512962 PLD2O14939 933 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 MCF2LO15068 1137 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 SPTLC2O15270 562 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 POLR2DO15514 142 aaKnown RBP12.53□□□□□ -0.4
SDHA-215ENST00000512962 AQP9O43315 295 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 PPFIA2O75334 1257 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 TCEA3O75764 348 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 GJB6O95452 261 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 LTFP02788 710 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 ITIH1P19827 911 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 TACR2P21452 398 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 ETV5P41161 510 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 ZNF165P49910 485 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 AMPD3Q01432 767 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 EIF2B5Q13144 721 aaKnown RBP12.53□□□□□ -0.4
SDHA-215ENST00000512962 C1orf61Q13536 156 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 SYPL2Q5VXT5 272 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 ZFAND4Q86XD8 727 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 JAMLQ86YT9 394 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 DMRTC2Q8IXT2 367 aaPredicted RBP12.53□□□□□ -0.4
SDHA-215ENST00000512962 CCAR2Q8N163 923 aaKnown RBP12.53□□□□□ -0.4
SDHA-215ENST00000512962 SCML4Q8N228 414 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 UBR7Q8N806 425 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 ZNF557Q8N988 423 aaPredicted RBP12.53□□□□□ -0.4
SDHA-215ENST00000512962 IQUBQ8NA54 791 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 CHST14Q8NCH0 376 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 GALNT11Q8NCW6 608 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 LMX1AQ8TE12 382 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 LIN37Q96GY3 246 aaPredicted RBP12.53□□□□□ -0.4
SDHA-215ENST00000512962 DUSP23Q9BVJ7 150 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 BOCQ9BWV1 1114 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 SLC25A18Q9H1K4 315 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 EPB41L5Q9HCM4 733 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 FOXJ2Q9P0K8 574 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 ACSL6Q9UKU0 697 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 POLR3KQ9Y2Y1 108 aaPredicted RBP12.53□□□□□ -0.4
SDHA-215ENST00000512962 PAXBP1Q9Y5B6 917 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 PCDHGA7Q9Y5G6 932 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 NOTCH2Q04721 2471 aa12.53□□□□□ -0.4
SDHA-215ENST00000512962 SPTY2D1-AS1A0A0U1RR47 76 aa12.52□□□□□ -0.41
SDHA-215ENST00000512962 A0A1W2PQM1 296 aa12.52□□□□□ -0.41
SDHA-215ENST00000512962 NEMP2A6NFY4 417 aa12.52□□□□□ -0.41
SDHA-215ENST00000512962 A6NNZ2 444 aa12.52□□□□□ -0.41
SDHA-215ENST00000512962 K7ERQ8 282 aa12.52□□□□□ -0.41
SDHA-215ENST00000512962 PDXKO00764 312 aa12.52□□□□□ -0.41
SDHA-215ENST00000512962 MOCS3O95396 460 aa12.52□□□□□ -0.41
SDHA-215ENST00000512962 MT-CO1P00395 513 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms