RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 HSPA1BP0DMV9 641 aaKnown RBP4.5□□□□□ -1.69
HTT-210ENST00000512909 ARSAP15289 507 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 POU1F1P28069 291 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 TYK2P29597 1187 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 RFC1P35251 1148 aaPredicted RBP4.5□□□□□ -1.69
HTT-210ENST00000512909 LIFRP42702 1097 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 CTCFP49711 727 aaPredicted RBP4.5□□□□□ -1.69
HTT-210ENST00000512909 MVDP53602 400 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 YWHAZP63104 245 aaKnown RBP4.5□□□□□ -1.69
HTT-210ENST00000512909 NEXNQ0ZGT2 675 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 AIMP1Q12904 312 aaKnown RBP4.5□□□□□ -1.69
HTT-210ENST00000512909 RUNX2Q13950 521 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 SEC23BQ15437 767 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 EARS2Q5JPH6 523 aaKnown RBP4.5□□□□□ -1.69
HTT-210ENST00000512909 CEP78Q5JTW2 689 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 PXDC1Q5TGL8 231 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 ACAD10Q6JQN1 1059 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 SYCE2Q6PIF2 218 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 DSTYKQ6XUX3 929 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 C4orf50Q6ZRC1 276 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 CPLX4Q7Z7G2 160 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 CHD1LQ86WJ1 897 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 PALB2Q86YC2 1186 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 ARL14EPQ8N8R7 260 aaPredicted RBP4.5□□□□□ -1.69
HTT-210ENST00000512909 SCAIQ8N9R8 606 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 RUFY2Q8WXA3 655 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 SKA1Q96BD8 255 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 SAAL1Q96ER3 474 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 CLMNQ96JQ2 1002 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 ZFYVE19Q96K21 471 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 TIGD1Q96MW7 591 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 EYA3Q99504 573 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 SH2D3AQ9BRG2 576 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 R3HDMLQ9H3Y0 253 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 SLITRK6Q9H5Y7 841 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 AAMDCQ9H7C9 122 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 TMEM248Q9NWD8 314 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 BABAM1Q9NWV8 329 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 NARFQ9UHQ1 456 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 TSPYL4Q9UJ04 414 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 CD207Q9UJ71 328 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 CDH22Q9UJ99 828 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 LAMP3Q9UQV4 416 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 MYOM1P52179 1685 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 NPC1L1Q9UHC9 1359 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 KDM6AO15550 1401 aaPredicted RBP4.49□□□□□ -1.69
HTT-210ENST00000512909 TEX13CA0A0J9YWL9 993 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 GOLGA6L10A0A0M3HER8 536 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 SMIM35A0A1B0GVV1 85 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 A0A1W2PPH5 198 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 ARHGAP10A1A4S6 786 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 TYW5A2RUC4 315 aaKnown RBP4.49□□□□□ -1.69
HTT-210ENST00000512909 TCERG1O14776 1098 aaKnown RBP4.49□□□□□ -1.69
HTT-210ENST00000512909 PER2O15055 1255 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 CEP104O60308 925 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 C1QL1O75973 258 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 TMCC1O94876 653 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 CHRM4P08173 479 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 TNFAIP3P21580 790 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 KELP23276 732 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 YWHAQP27348 245 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 TM4SF1P30408 202 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 AVPR2P30518 371 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 GGT5P36269 586 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 GJC1P36383 396 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 TMPOP42166 694 aaKnown RBP4.49□□□□□ -1.69
HTT-210ENST00000512909 CCR5P51681 352 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 CLCNKBP51801 687 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 CASP6P55212 293 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 GEMIN4P57678 1058 aaKnown RBP4.49□□□□□ -1.69
HTT-210ENST00000512909 NHLH1Q02575 133 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 GOLGA8DPQ0D2H9 430 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 VEPH1Q14D04 833 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 BAK1Q16611 211 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 AAGABQ6PD74 315 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 ATF7IPQ6VMQ6 1270 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 GSTA5Q7RTV2 222 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 NBPF5PQ86XG9 351 aaPredicted RBP4.49□□□□□ -1.69
HTT-210ENST00000512909 CAMK1DQ8IU85 385 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 FAM9BQ8IZU0 186 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 TMEM217Q8N7C4 229 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 SLC44A5Q8NCS7 719 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 C2CD4CQ8TF44 421 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 FAR1Q8WVX9 515 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 DDB2Q92466 427 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 OTULINQ96BN8 352 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 ARHGAP39Q9C0H5 1083 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 SLC32A1Q9H598 525 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 EPHX3Q9H6B9 360 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 TLR8Q9NR97 1041 aaKnown RBP4.49□□□□□ -1.69
HTT-210ENST00000512909 OLA1Q9NTK5 396 aaKnown RBP4.49□□□□□ -1.69
HTT-210ENST00000512909 BEX4Q9NWD9 120 aaPredicted RBP4.49□□□□□ -1.69
HTT-210ENST00000512909 FLRT1Q9NZU1 646 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 HCN3Q9P1Z3 774 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 UPB1Q9UBR1 384 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 FBXO40Q9UH90 709 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 PNMA2Q9UL42 364 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 CAMK2AQ9UQM7 478 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 RAP2CQ9Y3L5 183 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 CYP46A1Q9Y6A2 500 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms