RNA–Protein interactions for RNA: ENST00000512713.5

YIPF3-216, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 306 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-216ENST00000512713 AP4E1Q9UPM8 1137 aa9.31□□□□□ -0.92
YIPF3-216ENST00000512713 ITM2BQ9Y287 266 aa9.31□□□□□ -0.92
YIPF3-216ENST00000512713 BZW2Q9Y6E2 419 aaKnown RBP9.31□□□□□ -0.92
YIPF3-216ENST00000512713 PCNX2A6NKB5 2137 aa9.31□□□□□ -0.92
YIPF3-216ENST00000512713 A0A1B0GTH6 734 aa9.3□□□□□ -0.92
YIPF3-216ENST00000512713 TOR1BO14657 336 aa9.3□□□□□ -0.92
YIPF3-216ENST00000512713 RIOK3O14730 519 aaKnown RBP9.3□□□□□ -0.92
YIPF3-216ENST00000512713 AREL1O15033 823 aa9.3□□□□□ -0.92
YIPF3-216ENST00000512713 ATMINO43313 823 aaPredicted RBP9.3□□□□□ -0.92
YIPF3-216ENST00000512713 PRAMEF11O60813 436 aa9.3□□□□□ -0.92
YIPF3-216ENST00000512713 PALMO75781 387 aa9.3□□□□□ -0.92
YIPF3-216ENST00000512713 TM7SF2O76062 418 aa9.3□□□□□ -0.92
YIPF3-216ENST00000512713 CKMT1AP12532 417 aa9.3□□□□□ -0.92
YIPF3-216ENST00000512713 NME1P15531 152 aaKnown RBP9.3□□□□□ -0.92
YIPF3-216ENST00000512713 TIMP2P16035 220 aa9.3□□□□□ -0.92
YIPF3-216ENST00000512713 JUNDP17535 347 aa9.3□□□□□ -0.92
YIPF3-216ENST00000512713 PRKCIP41743 596 aa9.3□□□□□ -0.92
YIPF3-216ENST00000512713 PAPOLAP51003 745 aaKnown RBP9.3□□□□□ -0.92
YIPF3-216ENST00000512713 ZNF135P52742 658 aaPredicted RBP9.3□□□□□ -0.92
YIPF3-216ENST00000512713 OGDHQ02218 1023 aa9.3□□□□□ -0.92
YIPF3-216ENST00000512713 PPP6R3Q5H9R7 873 aaPredicted RBP9.3□□□□□ -0.92
YIPF3-216ENST00000512713 RFX8Q6ZV50 586 aa9.3□□□□□ -0.92
YIPF3-216ENST00000512713 ZNF571Q7Z3V5 609 aaPredicted RBP9.3□□□□□ -0.92
YIPF3-216ENST00000512713 VPS36Q86VN1 386 aa9.3□□□□□ -0.92
YIPF3-216ENST00000512713 GAS2L3Q86XJ1 694 aa9.3□□□□□ -0.92
YIPF3-216ENST00000512713 DNAAF5Q86Y56 855 aa9.3□□□□□ -0.92
YIPF3-216ENST00000512713 CACTIN-AS1Q8N1I8 211 aa9.3□□□□□ -0.92
YIPF3-216ENST00000512713 FNIP1Q8TF40 1166 aa9.3□□□□□ -0.92
YIPF3-216ENST00000512713 CENPTQ96BT3 561 aa9.3□□□□□ -0.92
YIPF3-216ENST00000512713 ZNF653Q96CK0 615 aa9.3□□□□□ -0.92
YIPF3-216ENST00000512713 CELF6Q96J87 481 aaKnown RBP9.3□□□□□ -0.92
YIPF3-216ENST00000512713 TUBGCP5Q96RT8 1024 aa9.3□□□□□ -0.92
YIPF3-216ENST00000512713 KLF6Q99612 283 aaPredicted RBP9.3□□□□□ -0.92
YIPF3-216ENST00000512713 WRAP53Q9BUR4 548 aaKnown RBP9.3□□□□□ -0.92
YIPF3-216ENST00000512713 KLC2Q9H0B6 622 aa9.3□□□□□ -0.92
YIPF3-216ENST00000512713 LRRC19Q9H756 370 aa9.3□□□□□ -0.92
YIPF3-216ENST00000512713 ATP13A3Q9H7F0 1226 aa9.3□□□□□ -0.92
YIPF3-216ENST00000512713 ZWILCHQ9H900 591 aa9.3□□□□□ -0.92
YIPF3-216ENST00000512713 GPATCH2LQ9NWQ4 482 aa9.3□□□□□ -0.92
YIPF3-216ENST00000512713 CNOT8Q9UFF9 292 aaKnown RBP9.3□□□□□ -0.92
YIPF3-216ENST00000512713 CLCA2Q9UQC9 943 aa9.3□□□□□ -0.92
YIPF3-216ENST00000512713 GPSM3Q9Y4H4 160 aa9.3□□□□□ -0.92
YIPF3-216ENST00000512713 AK5Q9Y6K8 562 aa9.3□□□□□ -0.92
YIPF3-216ENST00000512713 CSNK1G3Q9Y6M4 447 aa9.3□□□□□ -0.92
YIPF3-216ENST00000512713 TNRC6BQ9UPQ9 1833 aaKnown RBP9.3□□□□□ -0.92
YIPF3-216ENST00000512713 ITPR1Q14643 2758 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 PI4KAP42356 2102 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 FAM208BQ5VWN6 2430 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 TMEM110-MUSTN1A8MSY1 372 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 J3KR12 359 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 K7ESM1 405 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 DDX3XO00571 662 aaKnown RBP eCLIP9.29□□□□□ -0.92
YIPF3-216ENST00000512713 MMP20O60882 483 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 GP1BAP07359 652 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 HTR1BP28222 390 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 SERPINA4P29622 427 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 MIPP30301 263 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 CSNK1DP48730 415 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 HCAR3P49019 387 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 RPIAP49247 311 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 PFN3P60673 137 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 YPEL5P62699 121 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 POLR2LP62875 67 aaKnown RBP9.29□□□□□ -0.92
YIPF3-216ENST00000512713 SEMG2Q02383 582 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 RFTN1Q14699 578 aaPredicted RBP9.29□□□□□ -0.92
YIPF3-216ENST00000512713 NR1I3Q14994 352 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 ACAP1Q15027 740 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 LRRC14Q15048 493 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 CYTH1Q15438 398 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 UGP2Q16851 508 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 BOLA3Q53S33 107 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 FIGNQ5HY92 759 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 ZCCHC8Q6NZY4 707 aaKnown RBP9.29□□□□□ -0.92
YIPF3-216ENST00000512713 BRAT1Q6PJG6 821 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 C19orf48Q6RUI8 117 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 LZTR1Q8N653 840 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 DCBLD1Q8N8Z6 715 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 FAM181AQ8N9Y4 354 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 NETO2Q8NC67 525 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 ZNF548Q8NEK5 533 aaPredicted RBP9.29□□□□□ -0.92
YIPF3-216ENST00000512713 LMX1AQ8TE12 382 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 HNRNPLLQ8WVV9 542 aaKnown RBP9.29□□□□□ -0.92
YIPF3-216ENST00000512713 RFFLQ8WZ73 363 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 GLMNQ92990 594 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 IQCDQ96DY2 449 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 EXOC2Q96KP1 924 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 IL12RB2Q99665 862 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.29□□□□□ -0.92
YIPF3-216ENST00000512713 SNRNP25Q9BV90 132 aaKnown RBP9.29□□□□□ -0.92
YIPF3-216ENST00000512713 CINPQ9BW66 212 aaPredicted RBP9.29□□□□□ -0.92
YIPF3-216ENST00000512713 SLC13A1Q9BZW2 595 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 NRSN2Q9GZP1 204 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 SUV39H2Q9H5I1 410 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 SP110Q9HB58 689 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 SCUBE2Q9NQ36 999 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 GPR27Q9NS67 375 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 MYO1AQ9UBC5 1043 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 SPASTQ9UBP0 616 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 GGT7Q9UJ14 662 aa9.29□□□□□ -0.92
YIPF3-216ENST00000512713 RALYQ9UKM9 306 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms