RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 MAP1BP46821 2468 aaKnown RBP16.69■□□□□ 0.26
DDX41-213ENST00000512027 GOLGA8CPA6NN73 597 aa16.68■□□□□ 0.26
DDX41-213ENST00000512027 NEMP1O14524 444 aa16.68■□□□□ 0.26
DDX41-213ENST00000512027 AP1G1O43747 822 aa16.68■□□□□ 0.26
DDX41-213ENST00000512027 SDC3O75056 442 aa16.68■□□□□ 0.26
DDX41-213ENST00000512027 MAP3K6O95382 1288 aa16.68■□□□□ 0.26
DDX41-213ENST00000512027 FTH1P19P0C7X4 201 aa16.68■□□□□ 0.26
DDX41-213ENST00000512027 TIMP2P16035 220 aa16.68■□□□□ 0.26
DDX41-213ENST00000512027 AKT2P31751 481 aa16.68■□□□□ 0.26
DDX41-213ENST00000512027 NUDT1P36639 197 aa16.68■□□□□ 0.26
DDX41-213ENST00000512027 ARSEP51690 589 aa16.68■□□□□ 0.26
DDX41-213ENST00000512027 ZNF135P52742 658 aaPredicted RBP16.68■□□□□ 0.26
DDX41-213ENST00000512027 RPS21P63220 83 aaKnown RBP16.68■□□□□ 0.26
DDX41-213ENST00000512027 RAD51Q06609 339 aa16.68■□□□□ 0.26
DDX41-213ENST00000512027 IL10RBQ08334 325 aa16.68■□□□□ 0.26
DDX41-213ENST00000512027 SLC10A7Q0GE19 358 aa16.68■□□□□ 0.26
DDX41-213ENST00000512027 DPYSL3Q14195 570 aa16.68■□□□□ 0.26
DDX41-213ENST00000512027 MESDQ14696 234 aa16.68■□□□□ 0.26
DDX41-213ENST00000512027 KIAA1161Q6NSJ0 714 aa16.68■□□□□ 0.26
DDX41-213ENST00000512027 TTC7BQ86TV6 843 aa16.68■□□□□ 0.26
DDX41-213ENST00000512027 GAS2L3Q86XJ1 694 aa16.68■□□□□ 0.26
DDX41-213ENST00000512027 CNGA4Q8IV77 575 aa16.68■□□□□ 0.26
DDX41-213ENST00000512027 SLC22A18ASQ8N1D0 253 aa16.68■□□□□ 0.26
DDX41-213ENST00000512027 TC2NQ8N9U0 490 aa16.68■□□□□ 0.26
DDX41-213ENST00000512027 SLC35G2Q8TBE7 412 aa16.68■□□□□ 0.26
DDX41-213ENST00000512027 KLHDC7BQ96G42 594 aa16.68■□□□□ 0.26
DDX41-213ENST00000512027 FEM1CQ96JP0 617 aa16.68■□□□□ 0.26
DDX41-213ENST00000512027 WRAP53Q9BUR4 548 aaKnown RBP16.68■□□□□ 0.26
DDX41-213ENST00000512027 CALN1Q9BXU9 219 aa16.68■□□□□ 0.26
DDX41-213ENST00000512027 ASPMQ8IZT6 3477 aa16.67■□□□□ 0.26
DDX41-213ENST00000512027 POM121BA6NF01 834 aa16.67■□□□□ 0.26
DDX41-213ENST00000512027 AREL1O15033 823 aa16.67■□□□□ 0.26
DDX41-213ENST00000512027 MFSD11O43934 449 aa16.67■□□□□ 0.26
DDX41-213ENST00000512027 PCDHGA12O60330 932 aa16.67■□□□□ 0.26
DDX41-213ENST00000512027 MMP20O60882 483 aa16.67■□□□□ 0.26
DDX41-213ENST00000512027 EPHA8P29322 1005 aaPredicted RBP16.67■□□□□ 0.26
DDX41-213ENST00000512027 LBRQ14739 615 aaKnown RBP16.67■□□□□ 0.26
DDX41-213ENST00000512027 SUZ12Q15022 739 aaKnown RBP16.67■□□□□ 0.26
DDX41-213ENST00000512027 HADHQ16836 314 aaKnown RBP16.67■□□□□ 0.26
DDX41-213ENST00000512027 PTAR1Q7Z6K3 402 aaPredicted RBP16.67■□□□□ 0.26
DDX41-213ENST00000512027 SRLQ86TD4 932 aa16.67■□□□□ 0.26
DDX41-213ENST00000512027 SLCO6A1Q86UG4 719 aa16.67■□□□□ 0.26
DDX41-213ENST00000512027 IQCHQ86VS3 1027 aa16.67■□□□□ 0.26
DDX41-213ENST00000512027 CHCHD4Q8N4Q1 142 aa16.67■□□□□ 0.26
DDX41-213ENST00000512027 LZTR1Q8N653 840 aa16.67■□□□□ 0.26
DDX41-213ENST00000512027 SAP25Q8TEE9 199 aa16.67■□□□□ 0.26
DDX41-213ENST00000512027 LRRN4Q8WUT4 740 aa16.67■□□□□ 0.26
DDX41-213ENST00000512027 RAB7BQ96AH8 199 aa16.67■□□□□ 0.26
DDX41-213ENST00000512027 BMFQ96LC9 184 aa16.67■□□□□ 0.26
DDX41-213ENST00000512027 SCNM1Q9BWG6 230 aa16.67■□□□□ 0.26
DDX41-213ENST00000512027 CPEB1Q9BZB8 566 aaKnown RBP16.67■□□□□ 0.26
DDX41-213ENST00000512027 COQ6Q9Y2Z9 468 aa16.67■□□□□ 0.26
DDX41-213ENST00000512027 PTPRBP23467 1997 aa16.66■□□□□ 0.26
DDX41-213ENST00000512027 EPG5Q9HCE0 2579 aa16.66■□□□□ 0.26
DDX41-213ENST00000512027 TSPAN6O43657 245 aa16.66■□□□□ 0.26
DDX41-213ENST00000512027 MAFKO60675 156 aa16.66■□□□□ 0.26
DDX41-213ENST00000512027 PEX11BO96011 259 aa16.66■□□□□ 0.26
DDX41-213ENST00000512027 ATXN1LP0C7T5 689 aaKnown RBP16.66■□□□□ 0.26
DDX41-213ENST00000512027 GRK6P43250 576 aa16.66■□□□□ 0.26
DDX41-213ENST00000512027 ZNF75DP51815 510 aa16.66■□□□□ 0.26
DDX41-213ENST00000512027 SHC2P98077 582 aa16.66■□□□□ 0.26
DDX41-213ENST00000512027 HNRNPDQ14103 355 aaKnown RBP16.66■□□□□ 0.26
DDX41-213ENST00000512027 TPRG1LQ5T0D9 272 aa16.66■□□□□ 0.26
DDX41-213ENST00000512027 TMCO4Q5TGY1 634 aa16.66■□□□□ 0.26
DDX41-213ENST00000512027 NCBP2-AS2Q69YL0 99 aa16.66■□□□□ 0.26
DDX41-213ENST00000512027 PGBD5Q8N414 524 aa16.66■□□□□ 0.26
DDX41-213ENST00000512027 ATPAF2Q8N5M1 289 aa16.66■□□□□ 0.26
DDX41-213ENST00000512027 PCDH19Q8TAB3 1148 aa16.66■□□□□ 0.26
DDX41-213ENST00000512027 FAM71BQ8TC56 605 aa16.66■□□□□ 0.26
DDX41-213ENST00000512027 KLF6Q99612 283 aaPredicted RBP16.66■□□□□ 0.26
DDX41-213ENST00000512027 C1QTNF2Q9BXJ5 285 aa16.66■□□□□ 0.26
DDX41-213ENST00000512027 SUV39H2Q9H5I1 410 aa16.66■□□□□ 0.26
DDX41-213ENST00000512027 TOR4AQ9NXH8 423 aa16.66■□□□□ 0.26
DDX41-213ENST00000512027 DKK3Q9UBP4 350 aa16.66■□□□□ 0.26
DDX41-213ENST00000512027 KLK13Q9UKR3 277 aa16.66■□□□□ 0.26
DDX41-213ENST00000512027 TFR2Q9UP52 801 aa16.66■□□□□ 0.26
DDX41-213ENST00000512027 COL5A1P20908 1838 aaPredicted RBP16.66■□□□□ 0.26
DDX41-213ENST00000512027 WDFY3Q8IZQ1 3526 aa16.65■□□□□ 0.26
DDX41-213ENST00000512027 TSPAN11A1L157 253 aa16.65■□□□□ 0.26
DDX41-213ENST00000512027 DFNA5O60443 496 aa16.65■□□□□ 0.26
DDX41-213ENST00000512027 ITGAVP06756 1048 aa16.65■□□□□ 0.26
DDX41-213ENST00000512027 XPAP23025 273 aaPredicted RBP16.65■□□□□ 0.26
DDX41-213ENST00000512027 ARRB1P49407 418 aaPredicted RBP16.65■□□□□ 0.26
DDX41-213ENST00000512027 SCNN1BP51168 640 aa16.65■□□□□ 0.26
DDX41-213ENST00000512027 MAXP61244 160 aa16.65■□□□□ 0.26
DDX41-213ENST00000512027 SGCGQ13326 291 aa16.65■□□□□ 0.26
DDX41-213ENST00000512027 ZNF235Q14590 738 aa16.65■□□□□ 0.26
DDX41-213ENST00000512027 CCDC157Q569K6 752 aa16.65■□□□□ 0.26
DDX41-213ENST00000512027 ZNF542PQ5EBM4 170 aa16.65■□□□□ 0.26
DDX41-213ENST00000512027 Q6ZSR6 202 aa16.65■□□□□ 0.26
DDX41-213ENST00000512027 ABI3BPQ7Z7G0 1075 aa16.65■□□□□ 0.26
DDX41-213ENST00000512027 EID2Q8N6I1 236 aa16.65■□□□□ 0.26
DDX41-213ENST00000512027 KCTD6Q8NC69 237 aa16.65■□□□□ 0.26
DDX41-213ENST00000512027 CXorf40AQ8TE69 158 aa16.65■□□□□ 0.26
DDX41-213ENST00000512027 ERVMER34-1Q9H9K5 563 aa16.65■□□□□ 0.26
DDX41-213ENST00000512027 PCDH12Q9NPG4 1184 aa16.65■□□□□ 0.26
DDX41-213ENST00000512027 HYOU1Q9Y4L1 999 aa16.65■□□□□ 0.26
DDX41-213ENST00000512027 IGF2RP11717 2491 aa16.65■□□□□ 0.26
DDX41-213ENST00000512027 ARID1BQ8NFD5 2236 aaPredicted RBP16.65■□□□□ 0.26
DDX41-213ENST00000512027 USP24Q9UPU5 2620 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms