RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 OTOGLQ3ZCN5 2332 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 SDK1Q7Z5N4 2213 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 hCG_1818297A0A087WSY0 165 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 A0A1W2PPC4 97 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 A0A1W2PQU0 124 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 LNP1A1A4G5 178 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 MIF4GDA9UHW6 222 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 PATE3B3GLJ2 98 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 C10orf142B7Z368 130 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 NEMP1O14524 444 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 PPP1R12AO14974 1030 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 MUSKO15146 869 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 LATO43561 262 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 TSPAN6O43657 245 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 AP1G1O43747 822 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 RNGTTO60942 597 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 PCDH8O95206 1070 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 PIGNO95427 931 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 FTCDO95954 541 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 SYPP08247 313 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 CCNB1P14635 433 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 TIMP2P16035 220 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 SDHBP21912 280 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 TGM2P21980 687 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 XPAP23025 273 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 MARCKSL1P49006 195 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 PEX5P50542 639 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 SUOXP51687 545 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 POLR2LP62875 67 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 RPS21P63220 83 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 PPIDQ08752 370 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 ITKQ08881 620 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 AP1B1Q10567 949 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 LLGL1Q15334 1064 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 TEAD4Q15561 434 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 PPP2R5EQ16537 467 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 RALGPS1Q5JS13 557 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 TCEAL6Q6IPX3 200 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 BRAT1Q6PJG6 821 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 NPNTQ6UXI9 565 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 TRIM69Q86WT6 500 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 HORMAD1Q86X24 394 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 CAMK1DQ8IU85 385 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 CCDC13Q8IYE1 715 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 PGBD5Q8N414 524 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 UBL4BQ8N7F7 174 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 PAF1Q8N7H5 531 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 C1orf216Q8TAB5 229 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 P3H4Q92791 437 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 TCEAL3Q969E4 200 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 VOPP1Q96AW1 172 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 SKA1Q96BD8 255 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 NUDCD1Q96RS6 583 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 LGMNQ99538 433 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 ZDHHC5Q9C0B5 715 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 TM9SF3Q9HD45 589 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 NT5MQ9NPB1 228 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 SCUBE2Q9NQ36 999 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 LZTFL1Q9NQ48 299 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 RBM22Q9NW64 420 aaKnown RBP eCLIP7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 AMACRQ9UHK6 382 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 DMTF1Q9Y222 760 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 FADS3Q9Y5Q0 445 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 CAPN6Q9Y6Q1 641 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 PTPRZ1P23471 2315 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 DMDP11532 3685 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 SPAG17Q6Q759 2223 aa7.23□□□□□ -1.25
PDLIM5-215ENST00000511586 RIF1Q5UIP0 2472 aaKnown RBP7.22□□□□□ -1.25
PDLIM5-215ENST00000511586 PIEZO1Q92508 2521 aa7.22□□□□□ -1.25
PDLIM5-215ENST00000511586 FAM186AA6NE01 2351 aa7.22□□□□□ -1.25
PDLIM5-215ENST00000511586 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-215ENST00000511586 A0A1W2PQ67 120 aa7.22□□□□□ -1.25
PDLIM5-215ENST00000511586 TSPAN11A1L157 253 aa7.22□□□□□ -1.25
PDLIM5-215ENST00000511586 TTC24A2A3L6 582 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-215ENST00000511586 PRAMEF26H0Y7S4 382 aa7.22□□□□□ -1.25
PDLIM5-215ENST00000511586 KCNK1O00180 336 aa7.22□□□□□ -1.25
PDLIM5-215ENST00000511586 ARHGAP33O14559 1287 aa7.22□□□□□ -1.25
PDLIM5-215ENST00000511586 MTSS1O43312 755 aa7.22□□□□□ -1.25
PDLIM5-215ENST00000511586 GDF9O60383 454 aa7.22□□□□□ -1.25
PDLIM5-215ENST00000511586 SOCS5O75159 536 aa7.22□□□□□ -1.25
PDLIM5-215ENST00000511586 GJB3O75712 270 aa7.22□□□□□ -1.25
PDLIM5-215ENST00000511586 TJP3O95049 919 aa7.22□□□□□ -1.25
PDLIM5-215ENST00000511586 PYGMP11217 842 aa7.22□□□□□ -1.25
PDLIM5-215ENST00000511586 ENGP17813 658 aa7.22□□□□□ -1.25
PDLIM5-215ENST00000511586 CR2P20023 1033 aa7.22□□□□□ -1.25
PDLIM5-215ENST00000511586 CES1P23141 567 aa7.22□□□□□ -1.25
PDLIM5-215ENST00000511586 MAT2AP31153 395 aaKnown RBP7.22□□□□□ -1.25
PDLIM5-215ENST00000511586 PTPN7P35236 360 aa7.22□□□□□ -1.25
PDLIM5-215ENST00000511586 ABL2P42684 1182 aa7.22□□□□□ -1.25
PDLIM5-215ENST00000511586 CSNK1EP49674 416 aaKnown RBP7.22□□□□□ -1.25
PDLIM5-215ENST00000511586 AFF3P51826 1226 aaKnown RBP7.22□□□□□ -1.25
PDLIM5-215ENST00000511586 ATXN3P54252 364 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-215ENST00000511586 MAXP61244 160 aa7.22□□□□□ -1.25
PDLIM5-215ENST00000511586 PPP2CBP62714 309 aa7.22□□□□□ -1.25
PDLIM5-215ENST00000511586 RACK1P63244 317 aaKnown RBP7.22□□□□□ -1.25
PDLIM5-215ENST00000511586 PPP2CAP67775 309 aa7.22□□□□□ -1.25
PDLIM5-215ENST00000511586 ELP6Q0PNE2 266 aa7.22□□□□□ -1.25
PDLIM5-215ENST00000511586 UGP2Q16851 508 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms