RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 LRRC72A6NJI9 287 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 PRR5-ARHGAP8B1AHC4 643 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 TRIM3O75382 744 aaPredicted RBP4.98□□□□□ -1.61
PTPN13-209ENST00000511467 ULK1O75385 1050 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 CELF2O95319 508 aaKnown RBP4.98□□□□□ -1.61
PTPN13-209ENST00000511467 BAG2O95816 211 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 HSD3B1P14060 373 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 GNSP15586 552 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 LPOP22079 712 aaPredicted RBP4.98□□□□□ -1.61
PTPN13-209ENST00000511467 HSD3B2P26439 372 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 TKTL1P51854 596 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 CASP5P51878 434 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 GMFBP60983 142 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 RING1Q06587 406 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 USP4Q13107 963 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 SUZ12Q15022 739 aaKnown RBP4.98□□□□□ -1.61
PTPN13-209ENST00000511467 UBE2SQ16763 222 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 LCLAT1Q6UWP7 414 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 SPOCK2Q92563 424 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 NR1H4Q96RI1 486 aaPredicted RBP4.98□□□□□ -1.61
PTPN13-209ENST00000511467 BRD9Q9H8M2 597 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 DNAJC28Q9NX36 388 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 ADA2Q9NZK5 511 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 ZNF214Q9UL59 606 aaPredicted RBP4.98□□□□□ -1.61
PTPN13-209ENST00000511467 ANGPT4Q9Y264 503 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 MAGEA13PA6NCF6 341 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 MEI4A8MW99 385 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 LZTS3O60299 673 aaPredicted RBP4.98□□□□□ -1.61
PTPN13-209ENST00000511467 PEX10O60683 326 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 UGT1A5P35504 534 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 GPR15P49685 360 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 HERC3Q15034 1050 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 SLC8B1Q6J4K2 584 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 MZT2AQ6P582 158 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 SLC4A11Q8NBS3 891 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 OR6C4Q8NGE1 309 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 PROX1Q92786 737 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 NKD2Q969F2 451 aaPredicted RBP4.98□□□□□ -1.61
PTPN13-209ENST00000511467 MTMR8Q96EF0 704 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 PDCD2LQ9BRP1 358 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 TTYH1Q9H313 450 aaPredicted RBP4.98□□□□□ -1.61
PTPN13-209ENST00000511467 TASP1Q9H6P5 420 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 IFT80Q9P2H3 777 aaPredicted RBP4.98□□□□□ -1.61
PTPN13-209ENST00000511467 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.98□□□□□ -1.61
PTPN13-209ENST00000511467 TBK1Q9UHD2 729 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 ZNF112Q9UJU3 913 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 DTNAQ9Y4J8 743 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 SPTA1P02549 2419 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 FAM25AB3EWG3 89 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 FAM25CB3EWG5 89 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 FAM25GB3EWG6 89 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 PITPNM1O00562 1244 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 TMEM127O75204 238 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 RNH1P13489 461 aaKnown RBP4.98□□□□□ -1.61
PTPN13-209ENST00000511467 C6orf52Q5T4I8 152 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 PLD3Q8IV08 490 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 CNTD1Q8N815 330 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 OR52L1Q8NGH7 329 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 MYDGFQ969H8 173 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 CXorf40BQ96DE9 158 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 CCT8L2Q96SF2 557 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 NPHS2Q9NP85 383 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 MS4A12Q9NXJ0 267 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 MARCH2Q9P0N8 246 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 IRAK3Q9Y616 596 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 NUP210Q8TEM1 1887 aaPredicted RBP4.98□□□□□ -1.61
PTPN13-209ENST00000511467 F8VP50 259 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 CST8O60676 142 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 SCGNO76038 276 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 MED26O95402 600 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 GJB6O95452 261 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 ANXA5P08758 320 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 HNRNPA1P09651 372 aaKnown RBP eCLIP4.98□□□□□ -1.61
PTPN13-209ENST00000511467 PSMC3P17980 439 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 ADORA2AP29274 412 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 OR1G1P47890 313 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 MYBPC3Q14896 1274 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 PDGFRLQ15198 375 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 PTGISQ16647 500 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 FBXO43Q4G163 708 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 SLC44A2Q8IWA5 706 aaPredicted RBP4.98□□□□□ -1.61
PTPN13-209ENST00000511467 TMIEQ8NEW7 156 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 SCGB3A2Q96PL1 93 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 DESI2Q9BSY9 194 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 CRNNQ9UBG3 495 aaPredicted RBP4.98□□□□□ -1.61
PTPN13-209ENST00000511467 SRP68Q9UHB9 627 aaKnown RBP4.98□□□□□ -1.61
PTPN13-209ENST00000511467 TAGLN3Q9UI15 199 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 MEIS2O14770 477 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 PPEF2O14830 753 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 TREHO43280 583 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 TRIM13O60858 407 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 RGS20O76081 388 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 EDN1P05305 212 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 THOP1P52888 689 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 TBC1D25Q3MII6 688 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 ACCSLQ4AC99 568 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 DENND5BQ6ZUT9 1274 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 CHSY3Q70JA7 882 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 SH3RF1Q7Z6J0 888 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 GALNT7Q86SF2 657 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms