RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 PTPN13Q12923 2485 aa3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 SLC38A8A6NNN8 435 aa3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 SEPT4O43236 478 aa3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 MBTPS2O43462 519 aa3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 FAM155BO75949 473 aa3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 CYP2A6P11509 494 aaPredicted RBP3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 SFPQP23246 707 aaKnown RBP eCLIP3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 ARL4CP56559 192 aa3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 RIPPLY3P57055 190 aa3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 RPL15P61313 204 aaKnown RBP3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 FKBP1AP62942 108 aaKnown RBP3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 SLC14A1Q13336 389 aa3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 TIGD6Q17RP2 521 aa3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 CERKLQ49MI3 558 aaPredicted RBP3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 AWAT1Q58HT5 328 aa3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 CEP78Q5JTW2 689 aa3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 PXDC1Q5TGL8 231 aa3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 KYAT3Q6YP21 454 aaKnown RBP3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 GPR142Q7Z601 462 aa3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 GALNT16Q8N428 558 aa3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 CERS5Q8N5B7 392 aa3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 IL17REQ8NFR9 667 aa3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 PHOSPHO2Q8TCD6 241 aa3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 HMGB4Q8WW32 186 aa3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 AKAP1Q92667 903 aaKnown RBP eCLIP3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 TRMT61AQ96FX7 289 aaKnown RBP3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 REXO5Q96IC2 774 aaKnown RBP3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 SCLT1Q96NL6 688 aa3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 QTRT1Q9BXR0 403 aaKnown RBP3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 MFSD1Q9H3U5 465 aa3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 SAYSD1Q9NPB0 183 aa3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 LIN7CQ9NUP9 197 aaKnown RBP3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 TMOD2Q9NZR1 351 aa3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 RRP7AQ9Y3A4 280 aaKnown RBP3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 DGKBQ9Y6T7 804 aa3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 ZHX2Q9Y6X8 837 aa3.94□□□□□ -1.78
TOPBP1-208ENST00000511439 ZZEF1O43149 2961 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 HMX3A6NHT5 357 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 C16orf96A6NNT2 1141 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 TTC34A8MYJ7 566 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 LOC730098B7Z3J9 87 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 TMEM232C9JQI7 657 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 PRYO14603 147 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 HSD3B1P14060 373 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 ICAM3P32942 547 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 HOXD12P35452 270 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 PPM1FP49593 454 aaPredicted RBP3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 AGTR2P50052 363 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 CLCN5P51795 746 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 FOXL2P58012 376 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 FAM3BP58499 235 aaPredicted RBP3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 PPFIA1Q13136 1202 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 RAPGEF1Q13905 1077 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 TRIP6Q15654 476 aaKnown RBP3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 CNGA3Q16281 694 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 ZNF569Q5MCW4 686 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 ANKRD40Q6AI12 368 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 ANKRD18AQ8IVF6 992 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 LAS2Q8IYD9 372 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 CCDC105Q8IYK2 499 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 SCYL3Q8IZE3 742 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 C8orf58Q8NAV2 365 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 TRPV1Q8NER1 839 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 GPRC5AQ8NFJ5 357 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 OR6Y1Q8NGX8 325 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 ZNF398Q8TD17 642 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 ASB12Q8WXK4 309 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 TRIM63Q969Q1 353 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 TRAPPC9Q96Q05 1148 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 FAM167BQ9BTA0 163 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 PRSS22Q9GZN4 317 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 BRD8Q9H0E9 1235 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 ELAC1Q9H777 363 aaKnown RBP3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 ITM2CQ9NQX7 267 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 ZNF112Q9UJU3 913 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 RAB21Q9UL25 225 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 AFG3L2Q9Y4W6 797 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 SIRT4Q9Y6E7 314 aaPredicted RBP3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 LOC400499M0QZD8 3231 aa3.93□□□□□ -1.78
TOPBP1-208ENST00000511439 CYP2D7A0A087X1C5 515 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 ENO4A6NNW6 628 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 H0Y3Z8 333 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 SLC30A4O14863 429 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 CREB3O43889 395 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 TOP3BO95985 862 aaKnown RBP3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 CYP3A4P08684 503 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 HMOX1P09601 288 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 CBSLP0DN79 551 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 ACTN1P12814 892 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 IGFBP2P18065 325 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 NDUFS1P28331 727 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 SERPINA4P29622 427 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 SLC8A1P32418 973 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 CBSP35520 551 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 ADD2P35612 726 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 STAT6P42226 847 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 CCT5P48643 541 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 ZNF84P51523 738 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 548.8 ms