RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 MMP21Q8N119 569 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 ZCCHC9Q8N567 271 aaKnown RBP3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 PDILTQ8N807 584 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 ZMIZ2Q8NF64 920 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 SLC35F5Q8WV83 523 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 TIGD1Q96MW7 591 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 GFM1Q96RP9 751 aaKnown RBP3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 BARD1Q99728 777 aaKnown RBP3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 WDR77Q9BQA1 342 aaPredicted RBP3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 CHCHD6Q9BRQ6 235 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 ISCUQ9H1K1 167 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 CDT1Q9H211 546 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 PRKRIP1Q9H875 184 aaPredicted RBP3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 PLEKHA5Q9HAU0 1116 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 BLOC1S4Q9NUP1 217 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 SPATS2LQ9NUQ6 558 aaKnown RBP3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 POT1Q9NUX5 634 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 ELOVL5Q9NYP7 299 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 MKLN1Q9UL63 735 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 A4GNTQ9UNA3 340 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 CARD8Q9Y2G2 431 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 KDM3AQ9Y4C1 1321 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 PI4KAP2A4QPH2 592 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 GAGE12JA6NER3 117 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 CBY3A6NI87 242 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 HSPB2A8KAH6 182 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 KLRF2D3W0D1 207 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 EBAG9O00559 213 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 SOCS2O14508 198 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 PPEF2O14830 753 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 BCAT2O15382 392 aaPredicted RBP3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 TIPRLO75663 272 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 RNASEH2AO75792 299 aaKnown RBP3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 MTA2O94776 668 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 EPN2O95208 641 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 CCNDBP1O95273 360 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 IFNA2P01563 188 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 KLKB1P03952 638 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 HEXAP06865 529 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 TMEM191BP0C7N4 346 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 CBSLP0DN79 551 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 ICAM3P32942 547 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 TTKP33981 857 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 CBSP35520 551 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 CENPAP49450 140 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 ENTPD1P49961 510 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 ARF3P61204 181 aaPredicted RBP3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 OLR1P78380 273 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 ARF1P84077 181 aaKnown RBP3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 TMEM115Q12893 351 aaPredicted RBP3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 ERV3-1Q14264 604 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 GPR18Q14330 331 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 RNPS1Q15287 305 aaKnown RBP3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 MED22Q15528 200 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 HSPB2Q16082 182 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 PLEKHO1Q53GL0 409 aaPredicted RBP3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 SLC45A4Q5BKX6 768 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 Q5PR19 223 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 WASHC2DQ5SRD0 308 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 PRAMEF19Q5SWL8 479 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 ASPHD1Q5U4P2 390 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 ITPRIPL1Q6GPH6 555 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 KLHL24Q6TFL4 600 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 PARM1Q6UWI2 310 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 CTU1Q7Z7A3 348 aaKnown RBP3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 PXKQ7Z7A4 578 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 PIM3Q86V86 326 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 DHX40Q8IX18 779 aaKnown RBP3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 TDRD9Q8NDG6 1382 aaKnown RBP3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 GJC3Q8NFK1 279 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 GTF3C6Q969F1 213 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 TMEM18Q96B42 140 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 INTS12Q96CB8 462 aaKnown RBP3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 NPFFR1Q9GZQ6 430 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 TMX4Q9H1E5 349 aaPredicted RBP3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 KLHL31Q9H511 634 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 MVB12BQ9H7P6 319 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 BRF2Q9HAW0 419 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 BPIFA1Q9NP55 256 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 EIF2B3Q9NR50 452 aaKnown RBP3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 SIRT3Q9NTG7 399 aaPredicted RBP3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 NDRG3Q9UGV2 375 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 LIMA1Q9UHB6 759 aaKnown RBP3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 KCNE2Q9Y6J6 123 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 PIAS3Q9Y6X2 628 aa3.57□□□□□ -1.84
TRAPPC11-207ENST00000511409 FAM237BA0A1B0GVD1 139 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 A0A1W2PQM1 296 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 FSD2A1L4K1 749 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 KDM4EB2RXH2 506 aaPredicted RBP3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 F5H0A9 414 aaPredicted RBP3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 H3BNX3 289 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 IFNL4K9M1U5 179 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 CHL1O00533 1208 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 TGFB1I1O43294 461 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 RGS11O94810 467 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 DDX58O95786 925 aaKnown RBP3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 TFP02787 698 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 CYP1A2P05177 515 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 KRT10P13645 584 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 SRD5A1P18405 259 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms