RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 PNMA8BQ9ULN7 279 aaPredicted RBP10.56□□□□□ -0.72
DDX41-211ENST00000510171 PCDHGA7Q9Y5G6 932 aa10.56□□□□□ -0.72
DDX41-211ENST00000510171 HEMK1Q9Y5R4 338 aaPredicted RBP10.56□□□□□ -0.72
DDX41-211ENST00000510171 KALRNO60229 2985 aa10.56□□□□□ -0.72
DDX41-211ENST00000510171 MYLKQ15746 1914 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 FAM170AA1A519 330 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 CYSRT1A8MQ03 144 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 TMEM110-MUSTN1A8MSY1 372 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 ALPIP09923 528 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 CTSEP14091 401 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 CYP11B1P15538 503 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 RHOQP17081 205 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 ERCC5P28715 1186 aaPredicted RBP10.55□□□□□ -0.72
DDX41-211ENST00000510171 SLC5A2P31639 672 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 MAPKAPK2P49137 400 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 CSRP3P50461 194 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 PEX5P50542 639 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 PDX1P52945 283 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 INHBCP55103 352 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 ATP11AP98196 1134 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 RAD51Q06609 339 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 NFATC3Q12968 1075 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 EIF3IQ13347 325 aaKnown RBP10.55□□□□□ -0.72
DDX41-211ENST00000510171 ELOCQ15369 112 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 MAN2A1Q16706 1144 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 KLHL40Q2TBA0 621 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 TRNP1Q6NT89 227 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 LEKR1Q6ZMV7 388 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 BNIPLQ7Z465 357 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 JAMLQ86YT9 394 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 IRF2BP1Q8IU81 584 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 SDR16C5Q8N3Y7 309 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 FSTL5Q8N475 847 aaPredicted RBP10.55□□□□□ -0.72
DDX41-211ENST00000510171 ARL10Q8N8L6 244 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 MSANTD4Q8NCY6 345 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 GFM1Q96RP9 751 aaKnown RBP10.55□□□□□ -0.72
DDX41-211ENST00000510171 EPAS1Q99814 870 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 MAGEH1Q9H213 219 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 MBNL1Q9NR56 388 aaKnown RBP10.55□□□□□ -0.72
DDX41-211ENST00000510171 SIRPGQ9P1W8 387 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 OR12D3Q9UGF7 316 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 DNAI1Q9UI46 699 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 TMEM59LQ9UK28 342 aa10.55□□□□□ -0.72
DDX41-211ENST00000510171 KDELR3O43731 214 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 NOBOXO60393 691 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 RASGRP1O95267 797 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 LSM8O95777 96 aaKnown RBP10.54□□□□□ -0.72
DDX41-211ENST00000510171 CELA2BP08218 269 aaPredicted RBP10.54□□□□□ -0.72
DDX41-211ENST00000510171 TIMP2P16035 220 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 ITIH2P19823 946 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 ADRA1BP35368 520 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 UGT1A5P35504 534 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 ANP32AP39687 249 aaKnown RBP10.54□□□□□ -0.72
DDX41-211ENST00000510171 HK3P52790 923 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 CCL7P80098 99 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 NRG1Q02297 640 aaPredicted RBP10.54□□□□□ -0.72
DDX41-211ENST00000510171 LINC00303Q3SY05 128 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 C2CD6Q53TS8 623 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 CT47A1Q5JQC4 288 aaPredicted RBP10.54□□□□□ -0.72
DDX41-211ENST00000510171 LRRC73Q5JTD7 316 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 ATXN7L2Q5T6C5 722 aaPredicted RBP10.54□□□□□ -0.72
DDX41-211ENST00000510171 TAF3Q5VWG9 929 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 ENPP7Q6UWV6 458 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 ARCQ7LC44 396 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 B3GNT8Q7Z7M8 397 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 NLRP14Q86W24 1093 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 GKN2Q86XP6 184 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 HID1Q8IV36 788 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 TP53I13Q8NBR0 393 aaPredicted RBP10.54□□□□□ -0.72
DDX41-211ENST00000510171 OR6C4Q8NGE1 309 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 CPA5Q8WXQ8 436 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 TSACCQ96A04 125 aaPredicted RBP10.54□□□□□ -0.72
DDX41-211ENST00000510171 CCDC74AQ96AQ1 378 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 VOPP1Q96AW1 172 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 SGF29Q96ES7 293 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 TMEM74Q96NL1 305 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 ARHGAP9Q9BRR9 750 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 EDEM3Q9BZQ6 932 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 FOXP3Q9BZS1 431 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 NUP62CLQ9H1M0 184 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 NDFIP2Q9NV92 336 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 TMEM248Q9NWD8 314 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 GPR34Q9UPC5 381 aa10.54□□□□□ -0.72
DDX41-211ENST00000510171 ZSCAN5CA6NGD5 496 aaPredicted RBP10.53□□□□□ -0.72
DDX41-211ENST00000510171 NVLO15381 856 aaKnown RBP10.53□□□□□ -0.72
DDX41-211ENST00000510171 BUB1O43683 1085 aa10.53□□□□□ -0.72
DDX41-211ENST00000510171 RAMP2O60895 175 aa10.53□□□□□ -0.72
DDX41-211ENST00000510171 ITGB2P05107 769 aa10.53□□□□□ -0.72
DDX41-211ENST00000510171 RPLP0P05388 317 aaKnown RBP10.53□□□□□ -0.72
DDX41-211ENST00000510171 JMJD7P0C870 316 aa10.53□□□□□ -0.72
DDX41-211ENST00000510171 SFTPCP11686 197 aa10.53□□□□□ -0.72
DDX41-211ENST00000510171 HGFP14210 728 aa10.53□□□□□ -0.72
DDX41-211ENST00000510171 XPAP23025 273 aaPredicted RBP10.53□□□□□ -0.72
DDX41-211ENST00000510171 HTR1BP28222 390 aa10.53□□□□□ -0.72
DDX41-211ENST00000510171 C1QBPQ07021 282 aaKnown RBP10.53□□□□□ -0.72
DDX41-211ENST00000510171 RAPGEF1Q13905 1077 aa10.53□□□□□ -0.72
DDX41-211ENST00000510171 LRRC14Q15048 493 aa10.53□□□□□ -0.72
DDX41-211ENST00000510171 TGIF1Q15583 401 aa10.53□□□□□ -0.72
DDX41-211ENST00000510171 ALG11Q2TAA5 492 aa10.53□□□□□ -0.72
DDX41-211ENST00000510171 WSCD2Q2TBF2 565 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms