RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 IGSF9Q9P2J2 1179 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 CHORDC1Q9UHD1 332 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 NUDT5Q9UKK9 219 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 CBLCQ9ULV8 474 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 ARHGAP26Q9UNA1 814 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 COA3Q9Y2R0 106 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 HBS1LQ9Y450 684 aaKnown RBP5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 ADAMTS20P59510 1910 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 F5P12259 2224 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 HELZP42694 1942 aaKnown RBP5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 TTC28Q96AY4 2481 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 A0A0A6YYK5 440 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 TCRBV5S1A1TA0A578 114 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 E2F8A0AVK6 867 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 BTNL10A8MVZ5 291 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 LOC730098B7Z3J9 87 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 ZNF561-AS1K7EIQ3 104 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 SLC9A3R1O14745 358 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 HGSO14964 777 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 PJA2O43164 708 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 MTA2O94776 668 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 ENDOD1O94919 500 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 LATS1O95835 1130 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 CYP1A2P05177 515 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 PYGMP11217 842 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 MBL2P11226 248 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 BPIP17213 487 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 CEBPBP17676 345 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 RRM1P23921 792 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 SDC4P31431 198 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 ARHGAP25P42331 645 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 PTPN9P43378 593 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 CDKN1CP49918 316 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 GALCP54803 685 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 AIF1P55008 147 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 HADHBP55084 474 aaKnown RBP5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 NTHL1P78549 312 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 GFPT1Q06210 699 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 MAMLD1Q13495 774 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 EIF4EBP2Q13542 120 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 PIGHQ14442 188 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 TEAD2Q15562 447 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 CLUL1Q15846 466 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 CRY1Q16526 586 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 SLC25A52Q3SY17 297 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 DCAF6Q58WW2 860 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 EMC4Q5J8M3 183 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 BRMS1LQ5PSV4 323 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 C10orf120Q5SQS8 335 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 FAM102AQ5T9C2 384 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 NUGGCQ68CJ6 796 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 TXNDC8Q6A555 127 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 GET4Q7L5D6 327 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 STRADAQ7RTN6 431 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 B3GNT8Q7Z7M8 397 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 MIB1Q86YT6 1006 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 ARID3BQ8IVW6 561 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 ADHFE1Q8IWW8 467 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 UNC45BQ8IWX7 931 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 DEFB106AQ8N104 65 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 MAB21L3Q8N8X9 362 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 TDRD5Q8NAT2 981 aaKnown RBP5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 OR2W6PQ8NHA6 318 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 ZSCAN18Q8TBC5 510 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 FEZF2Q8TBJ5 459 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 RFFLQ8WZ73 363 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 ELSPBP1Q96BH3 223 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 ZNF653Q96CK0 615 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 OTUB2Q96DC9 234 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 TCEAL4Q96EI5 215 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 ASB2Q96Q27 587 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 DDX50Q9BQ39 737 aaKnown RBP5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 GORASP1Q9BQQ3 440 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 APOL5Q9BWW9 433 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 SLC46A2Q9BY10 475 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 TSGA10Q9BZW7 698 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 RETREG1Q9H6L5 497 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 NMUR1Q9HB89 426 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 SPATA6Q9NWH7 488 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 THG1LQ9NWX6 298 aaKnown RBP5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 TAS2R14Q9NYV8 317 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 TBC1D14Q9P2M4 693 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 B4GALT6Q9UBX8 382 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 CNOT8Q9UFF9 292 aaKnown RBP5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 IP6K2Q9UHH9 426 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 SLC12A6Q9UHW9 1150 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 LSM7Q9UK45 103 aaKnown RBP5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 PCDHA13Q9Y5I0 950 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 COL6A3P12111 3177 aa5.68□□□□□ -1.5
HMGB1P44-201ENST00000508597 C2orf78A6NCI8 922 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 TMEM191CA6NGB0 347 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 C2CD4BA6NLJ0 364 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 TMCO5BA8MYB1 307 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 ANHXE9PGG2 379 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 GOLGA8SH3BPF8 625 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 MYO1FO00160 1098 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 CHADO15335 359 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 IRAK2O43187 625 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 CCP110O43303 1012 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms