RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 C16orf87Q6PH81 154 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 KIRREL2Q6UWL6 708 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 TUBA1AQ71U36 451 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 INTS8Q75QN2 995 aaKnown RBP4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 NLRP9Q7RTR0 991 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 TECPR1Q7Z6L1 1165 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 C2CD5Q86YS7 1000 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 KIRREL3Q8IZU9 778 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 SYT2Q8N9I0 419 aaPredicted RBP4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 ABHD11Q8NFV4 315 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 LRRC8CQ8TDW0 803 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 IP6K1Q92551 441 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 RAPGEF5Q92565 580 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 STMN2Q93045 179 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 EFHD2Q96C19 240 aaPredicted RBP4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 SNX27Q96L92 541 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 RUNDC3BQ96NL0 473 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 MOGAT1Q96PD6 335 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 LENG8Q96PV6 779 aaPredicted RBP4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 UBAC1Q9BSL1 405 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 FAM167BQ9BTA0 163 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 PUS3Q9BZE2 481 aaKnown RBP4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 EDEM3Q9BZQ6 932 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 NACA2Q9H009 215 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 CCDC68Q9H2F9 335 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 LRMDAQ9H2I8 198 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 ECT2Q9H8V3 914 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 ARMT1Q9H993 441 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 METTL14Q9HCE5 456 aaKnown RBP4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 PREBQ9HCU5 417 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 SARS2Q9NP81 518 aaKnown RBP4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 KLHL13Q9P2N7 655 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 ZNF212Q9UDV6 495 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 ANGPTL2Q9UKU9 493 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 TTC7AQ9ULT0 858 aaPredicted RBP4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 SHOC2Q9UQ13 582 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 L3MBTL1Q9Y468 752 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 TTLL3Q9Y4R7 772 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 A0A1W2PP64 1363 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 SZT2Q5T011 3432 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 NEDD4P46934 1319 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 PDS5AQ29RF7 1337 aaKnown RBP4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 BRCA1P38398 1863 aaKnown RBP4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 NFAT5O94916 1531 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 POC1B-GALNT4F8VUJ3 575 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 GOLGA8TH3BQL2 631 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 H7C1Q1 480 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 IDH3BO43837 385 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 HEXIM1O94992 359 aaKnown RBP4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 ZWINTO95229 277 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 NTN1O95631 604 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 GYPCP04921 128 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 ATP1A1P05023 1023 aaKnown RBP4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 ITGA2BP08514 1039 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 NUDT17P0C025 328 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 GOLGA8HP0CJ92 632 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 GNAZP19086 355 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 TMOD1P28289 359 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 ADORA2AP29274 412 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 EPHX2P34913 555 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 HOXD12P35452 270 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 NR4A2P43354 598 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 CDK7P50613 346 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 PMS2P54278 862 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 RAD23BP54727 409 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 NCALDP61601 193 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 MCL1Q07820 350 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 FHL1Q13642 323 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 GTF2H3Q13889 308 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 BTG3Q14201 252 aaPredicted RBP4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 KRT71Q3SY84 523 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 LIN52Q52LA3 116 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 PARP10Q53GL7 1025 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 RILPL1Q5EBL4 403 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 HAUS3Q68CZ6 603 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 AWAT2Q6E213 333 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 TMTC3Q6ZXV5 915 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 MARK2Q7KZI7 788 aaKnown RBP4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 ASRGL1Q7L266 308 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 PPP1R42Q7Z4L9 355 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 ZNF280BQ86YH2 543 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 NELFCDQ8IXH7 590 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 SLC15A3Q8IY34 581 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 GALNT4Q8N4A0 578 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 TTC39CQ8N584 583 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 ENAHQ8N8S7 591 aaPredicted RBP4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 TERB1Q8NA31 727 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 SPATA20Q8TB22 786 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 RAPGEF4Q8WZA2 1011 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 TAF4BQ92750 862 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 CASP10Q92851 521 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 CAPZA3Q96KX2 299 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 NUDCD1Q96RS6 583 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 RPS6KC1Q96S38 1066 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 HNRNPABQ99729 332 aaKnown RBP4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 LRRC1Q9BTT6 524 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 TMEM109Q9BVC6 243 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 RTFDC1Q9BY42 306 aaPredicted RBP4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 KRTAP1-5Q9BYS1 174 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 CXorf36Q9H7Y0 433 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms