RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 TUBA1BP68363 451 aa5.48□□□□□ -1.53
TOPBP1-206ENST00000508524 BIRC2Q13490 618 aa5.48□□□□□ -1.53
TOPBP1-206ENST00000508524 CAPSQ13938 189 aa5.48□□□□□ -1.53
TOPBP1-206ENST00000508524 EFHC1Q5JVL4 640 aa5.48□□□□□ -1.53
TOPBP1-206ENST00000508524 Q6ZTC4 211 aa5.48□□□□□ -1.53
TOPBP1-206ENST00000508524 H1FNTQ75WM6 255 aaPredicted RBP5.48□□□□□ -1.53
TOPBP1-206ENST00000508524 MON1AQ86VX9 555 aa5.48□□□□□ -1.53
TOPBP1-206ENST00000508524 NR2C2APQ86WQ0 139 aa5.48□□□□□ -1.53
TOPBP1-206ENST00000508524 C2CD5Q86YS7 1000 aa5.48□□□□□ -1.53
TOPBP1-206ENST00000508524 DENND6AQ8IWF6 608 aa5.48□□□□□ -1.53
TOPBP1-206ENST00000508524 TCP11L2Q8N4U5 519 aa5.48□□□□□ -1.53
TOPBP1-206ENST00000508524 DNAAF1Q8NEP3 725 aa5.48□□□□□ -1.53
TOPBP1-206ENST00000508524 CCT6BQ92526 530 aa5.48□□□□□ -1.53
TOPBP1-206ENST00000508524 RNF183Q96D59 192 aa5.48□□□□□ -1.53
TOPBP1-206ENST00000508524 PLSCR4Q9NRQ2 329 aa5.48□□□□□ -1.53
TOPBP1-206ENST00000508524 A0A1B0GVM2 712 aa5.47□□□□□ -1.53
TOPBP1-206ENST00000508524 VWA3AA6NCI4 1184 aa5.47□□□□□ -1.53
TOPBP1-206ENST00000508524 IRAK2O43187 625 aa5.47□□□□□ -1.53
TOPBP1-206ENST00000508524 CHRM4P08173 479 aa5.47□□□□□ -1.53
TOPBP1-206ENST00000508524 ARL4CP56559 192 aa5.47□□□□□ -1.53
TOPBP1-206ENST00000508524 KRTAP10-6P60371 365 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-206ENST00000508524 ERVFC1-1P60608 527 aa5.47□□□□□ -1.53
TOPBP1-206ENST00000508524 ST3GAL1Q11201 340 aa5.47□□□□□ -1.53
TOPBP1-206ENST00000508524 PLEKHO1Q53GL0 409 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-206ENST00000508524 SPSB3Q6PJ21 355 aa5.47□□□□□ -1.53
TOPBP1-206ENST00000508524 COG8Q96MW5 612 aa5.47□□□□□ -1.53
TOPBP1-206ENST00000508524 TWNKQ96RR1 684 aa5.47□□□□□ -1.53
TOPBP1-206ENST00000508524 YME1L1Q96TA2 773 aa5.47□□□□□ -1.53
TOPBP1-206ENST00000508524 C1QTNF4Q9BXJ3 329 aa5.47□□□□□ -1.53
TOPBP1-206ENST00000508524 DDX31Q9H8H2 851 aaKnown RBP5.47□□□□□ -1.53
TOPBP1-206ENST00000508524 NOD2Q9HC29 1040 aa5.47□□□□□ -1.53
TOPBP1-206ENST00000508524 CUX1P39880 1505 aa5.47□□□□□ -1.53
TOPBP1-206ENST00000508524 PRG4Q92954 1404 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-206ENST00000508524 ADGRF5Q8IZF2 1346 aa5.47□□□□□ -1.53
TOPBP1-206ENST00000508524 SCN5AQ14524 2016 aa5.47□□□□□ -1.53
TOPBP1-206ENST00000508524 J3KR12 359 aa5.46□□□□□ -1.54
TOPBP1-206ENST00000508524 MYF6P23409 242 aa5.46□□□□□ -1.54
TOPBP1-206ENST00000508524 CYP4A11Q02928 519 aa5.46□□□□□ -1.54
TOPBP1-206ENST00000508524 EEF1A2Q05639 463 aaKnown RBP5.46□□□□□ -1.54
TOPBP1-206ENST00000508524 EFR3AQ14156 821 aa5.46□□□□□ -1.54
TOPBP1-206ENST00000508524 ANKRD45Q5TZF3 282 aa5.46□□□□□ -1.54
TOPBP1-206ENST00000508524 TYW3Q6IPR3 259 aaKnown RBP5.46□□□□□ -1.54
TOPBP1-206ENST00000508524 MB21D2Q8IYB1 491 aaPredicted RBP5.46□□□□□ -1.54
TOPBP1-206ENST00000508524 RAB40AQ8WXH6 277 aa5.46□□□□□ -1.54
TOPBP1-206ENST00000508524 SH3KBP1Q96B97 665 aa5.46□□□□□ -1.54
TOPBP1-206ENST00000508524 SLITRK1Q96PX8 696 aa5.46□□□□□ -1.54
TOPBP1-206ENST00000508524 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.46□□□□□ -1.54
TOPBP1-206ENST00000508524 SPATS2LQ9NUQ6 558 aaKnown RBP5.46□□□□□ -1.54
TOPBP1-206ENST00000508524 IFT80Q9P2H3 777 aaPredicted RBP5.46□□□□□ -1.54
TOPBP1-206ENST00000508524 SPATA31D1Q6ZQQ2 1576 aa5.46□□□□□ -1.54
TOPBP1-206ENST00000508524 ABCA5Q8WWZ7 1642 aa5.45□□□□□ -1.54
TOPBP1-206ENST00000508524 A0A0U1RQJ8 604 aa5.45□□□□□ -1.54
TOPBP1-206ENST00000508524 PLSCR5A0PG75 271 aa5.45□□□□□ -1.54
TOPBP1-206ENST00000508524 CBY3A6NI87 242 aa5.45□□□□□ -1.54
TOPBP1-206ENST00000508524 EBAG9O00559 213 aa5.45□□□□□ -1.54
TOPBP1-206ENST00000508524 PEX12O00623 359 aa5.45□□□□□ -1.54
TOPBP1-206ENST00000508524 SLC16A5O15375 505 aa5.45□□□□□ -1.54
TOPBP1-206ENST00000508524 KLK10O43240 276 aa5.45□□□□□ -1.54
TOPBP1-206ENST00000508524 ANP32CO43423 234 aa5.45□□□□□ -1.54
TOPBP1-206ENST00000508524 WEE2P0C1S8 567 aa5.45□□□□□ -1.54
TOPBP1-206ENST00000508524 CXCR3P49682 368 aa5.45□□□□□ -1.54
TOPBP1-206ENST00000508524 PAPOLAP51003 745 aaKnown RBP5.45□□□□□ -1.54
TOPBP1-206ENST00000508524 ANKRD1Q15327 319 aa5.45□□□□□ -1.54
TOPBP1-206ENST00000508524 KIF19Q2TAC6 998 aa5.45□□□□□ -1.54
TOPBP1-206ENST00000508524 DCAF6Q58WW2 860 aa5.45□□□□□ -1.54
TOPBP1-206ENST00000508524 FBXO47Q5MNV8 452 aa5.45□□□□□ -1.54
TOPBP1-206ENST00000508524 PRSS45Q7RTY3 260 aa5.45□□□□□ -1.54
TOPBP1-206ENST00000508524 CUZD1Q86UP6 607 aa5.45□□□□□ -1.54
TOPBP1-206ENST00000508524 CHD1LQ86WJ1 897 aa5.45□□□□□ -1.54
TOPBP1-206ENST00000508524 AADATQ8N5Z0 425 aa5.45□□□□□ -1.54
TOPBP1-206ENST00000508524 USP38Q8NB14 1042 aa5.45□□□□□ -1.54
TOPBP1-206ENST00000508524 SPATA5Q8NB90 893 aa5.45□□□□□ -1.54
TOPBP1-206ENST00000508524 LILRB1Q8NHL6 650 aaPredicted RBP5.45□□□□□ -1.54
TOPBP1-206ENST00000508524 GDPD5Q8WTR4 605 aa5.45□□□□□ -1.54
TOPBP1-206ENST00000508524 GAREM1Q9H706 876 aa5.45□□□□□ -1.54
TOPBP1-206ENST00000508524 ANKRD10Q9NXR5 420 aa5.45□□□□□ -1.54
TOPBP1-206ENST00000508524 SUFUQ9UMX1 484 aa5.45□□□□□ -1.54
TOPBP1-206ENST00000508524 PCDHGB3Q9Y5G1 929 aa5.45□□□□□ -1.54
TOPBP1-206ENST00000508524 ADAMTS12P58397 1594 aa5.45□□□□□ -1.54
TOPBP1-206ENST00000508524 SH2D7A6NKC9 451 aaPredicted RBP5.44□□□□□ -1.54
TOPBP1-206ENST00000508524 PER2O15055 1255 aa5.44□□□□□ -1.54
TOPBP1-206ENST00000508524 CH25HO95992 272 aa5.44□□□□□ -1.54
TOPBP1-206ENST00000508524 MT3P25713 68 aa5.44□□□□□ -1.54
TOPBP1-206ENST00000508524 RYKP34925 604 aa5.44□□□□□ -1.54
TOPBP1-206ENST00000508524 RPL3P39023 403 aaKnown RBP5.44□□□□□ -1.54
TOPBP1-206ENST00000508524 LIFRP42702 1097 aa5.44□□□□□ -1.54
TOPBP1-206ENST00000508524 GRAMD1BQ3KR37 738 aa5.44□□□□□ -1.54
TOPBP1-206ENST00000508524 C17orf99Q6UX52 265 aa5.44□□□□□ -1.54
TOPBP1-206ENST00000508524 IL20RBQ6UXL0 311 aa5.44□□□□□ -1.54
TOPBP1-206ENST00000508524 CCDC129Q6ZRS4 1044 aa5.44□□□□□ -1.54
TOPBP1-206ENST00000508524 ZNF114Q8NC26 417 aa5.44□□□□□ -1.54
TOPBP1-206ENST00000508524 RFWD2Q8NHY2 731 aa5.44□□□□□ -1.54
TOPBP1-206ENST00000508524 TRIB2Q92519 343 aa5.44□□□□□ -1.54
TOPBP1-206ENST00000508524 CNOT9Q92600 299 aaKnown RBP5.44□□□□□ -1.54
TOPBP1-206ENST00000508524 MROH8Q9H579 483 aa5.44□□□□□ -1.54
TOPBP1-206ENST00000508524 EPHX3Q9H6B9 360 aa5.44□□□□□ -1.54
TOPBP1-206ENST00000508524 KCNG2Q9UJ96 466 aa5.44□□□□□ -1.54
TOPBP1-206ENST00000508524 C17orf113A0A1B0GUU1 675 aa5.43□□□□□ -1.54
TOPBP1-206ENST00000508524 DENND3A2RUS2 1198 aa5.43□□□□□ -1.54
TOPBP1-206ENST00000508524 VNN2O95498 520 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms