RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 ADRA1AP35348 466 aa14.33□□□□□ -0.12
RNF4-208ENST00000507247 ITGA8P53708 1063 aa14.33□□□□□ -0.12
RNF4-208ENST00000507247 WNT3AP56704 352 aa14.33□□□□□ -0.12
RNF4-208ENST00000507247 ELAVL3Q14576 367 aaKnown RBP14.33□□□□□ -0.12
RNF4-208ENST00000507247 TPSAB1Q15661 275 aa14.33□□□□□ -0.12
RNF4-208ENST00000507247 HSF5Q4G112 596 aaPredicted RBP14.33□□□□□ -0.12
RNF4-208ENST00000507247 CWF19L1Q69YN2 538 aaKnown RBP14.33□□□□□ -0.12
RNF4-208ENST00000507247 HIBCHQ6NVY1 386 aaPredicted RBP14.33□□□□□ -0.12
RNF4-208ENST00000507247 ZDHHC24Q6UX98 284 aa14.33□□□□□ -0.12
RNF4-208ENST00000507247 TMEM92Q6UXU6 159 aa14.33□□□□□ -0.12
RNF4-208ENST00000507247 SYNPOQ8N3V7 929 aa14.33□□□□□ -0.12
RNF4-208ENST00000507247 NAT8LQ8N9F0 302 aa14.33□□□□□ -0.12
RNF4-208ENST00000507247 OR8D1Q8WZ84 308 aa14.33□□□□□ -0.12
RNF4-208ENST00000507247 PRCCQ92733 491 aaPredicted RBP14.33□□□□□ -0.12
RNF4-208ENST00000507247 TUBGCP5Q96RT8 1024 aa14.33□□□□□ -0.12
RNF4-208ENST00000507247 TRIB3Q96RU7 358 aa14.33□□□□□ -0.12
RNF4-208ENST00000507247 FICDQ9BVA6 458 aa14.33□□□□□ -0.12
RNF4-208ENST00000507247 TDRD1Q9BXT4 1180 aaKnown RBP14.33□□□□□ -0.12
RNF4-208ENST00000507247 GDF3Q9NR23 364 aa14.33□□□□□ -0.12
RNF4-208ENST00000507247 EIF2B3Q9NR50 452 aaKnown RBP14.33□□□□□ -0.12
RNF4-208ENST00000507247 VPS45Q9NRW7 570 aa14.33□□□□□ -0.12
RNF4-208ENST00000507247 C2orf42Q9NWW7 574 aa14.33□□□□□ -0.12
RNF4-208ENST00000507247 WHRNQ9P202 907 aa14.33□□□□□ -0.12
RNF4-208ENST00000507247 IL36AQ9UHA7 158 aa14.33□□□□□ -0.12
RNF4-208ENST00000507247 SARDHQ9UL12 918 aa14.33□□□□□ -0.12
RNF4-208ENST00000507247 MMP17Q9ULZ9 603 aa14.33□□□□□ -0.12
RNF4-208ENST00000507247 AAR2Q9Y312 384 aaKnown RBP14.33□□□□□ -0.12
RNF4-208ENST00000507247 RAI2Q9Y5P3 530 aa14.33□□□□□ -0.12
RNF4-208ENST00000507247 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.32□□□□□ -0.12
RNF4-208ENST00000507247 CHURC1-FNTBB4DL54 471 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 STK25O00506 426 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 ALOX15BO15296 676 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 HTRA2O43464 458 aaPredicted RBP14.32□□□□□ -0.12
RNF4-208ENST00000507247 USP12O75317 370 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 SUN1O94901 812 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 AGTP01019 485 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 UGT2B4P06133 528 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 PDHA1P08559 390 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 GRIA1P42261 906 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 MAPK8P45983 427 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 METAP1P53582 386 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 COPAP53621 1224 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 DRG2P55039 364 aaKnown RBP14.32□□□□□ -0.12
RNF4-208ENST00000507247 RAD51Q06609 339 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 BCL2L1Q07817 233 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 ARSIQ5FYB1 569 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 EOGTQ5NDL2 527 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 SDE2Q6IQ49 451 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 TRIM67Q6ZTA4 783 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 ZNF534Q76KX8 674 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 KDELC2Q7Z4H8 507 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 ZSWIM9Q86XI8 627 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 PPIL6Q8IXY8 311 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 UBXN4Q92575 508 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 CLDN23Q96B33 292 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 PPP1R2P1Q96PQ5 205 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 TBL1YQ9BQ87 522 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 APOL2Q9BQE5 337 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 OSBPL6Q9BZF3 934 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 NEUROG2Q9H2A3 272 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 ATP13A3Q9H7F0 1226 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 LRRC40Q9H9A6 602 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 PPM1HQ9ULR3 514 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 CHKBQ9Y259 395 aa14.32□□□□□ -0.12
RNF4-208ENST00000507247 LOC285095A0A1B0GVY8 99 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 GOLGA6CA6NDK9 693 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 GOLGA6BA6NDN3 693 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 ERI2A8K979 691 aaKnown RBP14.31□□□□□ -0.12
RNF4-208ENST00000507247 GOLGA8MH3BSY2 632 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 PSMD3O43242 534 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 FZD6O60353 706 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 SYNCRIPO60506 623 aaKnown RBP14.31□□□□□ -0.12
RNF4-208ENST00000507247 GPR37L1O60883 481 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 SOCS5O75159 536 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 ATXN1LP0C7T5 689 aaKnown RBP14.31□□□□□ -0.12
RNF4-208ENST00000507247 GOLGA6DP0CG33 693 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 ITIH2P19823 946 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 SERPINA4P29622 427 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 ECHS1P30084 290 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 CHRNA4P43681 627 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 LMAN1P49257 510 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 TUBB4BP68371 445 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 GRM3Q14832 879 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 STARD3Q14849 445 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 MORF4L2Q15014 288 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 POM121L1PQ3SYA9 428 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 TMEM31Q5JXX7 168 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 GDPD4Q6W3E5 623 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 PCGF5Q86SE9 256 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 HOOK3Q86VS8 718 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 MMAAQ8IVH4 418 aaKnown RBP14.31□□□□□ -0.12
RNF4-208ENST00000507247 FLCNQ8NFG4 579 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 OR2T3Q8NH03 318 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 PIP4K2CQ8TBX8 421 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 ART4Q93070 314 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 ARRDC3Q96B67 414 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 ECHDC3Q96DC8 303 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 FEM1CQ96JP0 617 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 KLHL32Q96NJ5 620 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 FSD1LQ9BXM9 530 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms