RNA–Protein interactions for RNA: ENST00000507245.1

SMAD5-203, Transcript of SMAD family member 5, humanhuman

TSL 2

Gene SMAD5, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-203ENST00000507245 NPC1O15118 1278 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 MATN3O15232 486 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 FZD7O75084 574 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 URI1O94763 535 aaPredicted RBP6.23□□□□□ -1.41
SMAD5-203ENST00000507245 STBD1O95210 358 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 VNN1O95497 513 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 C22orf31O95567 290 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 PRKCBP05771 671 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 CA3P07451 260 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 NDUFB7P17568 137 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 SFNP31947 248 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 BUD31P41223 144 aaPredicted RBP6.23□□□□□ -1.41
SMAD5-203ENST00000507245 HALP42357 657 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 SUMO2P61956 95 aaKnown RBP6.23□□□□□ -1.41
SMAD5-203ENST00000507245 PTK2BQ14289 1009 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 LPIN1Q14693 890 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 NONOQ15233 471 aaKnown RBP eCLIP6.23□□□□□ -1.41
SMAD5-203ENST00000507245 ZNF484Q5JVG2 852 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 FBXO47Q5MNV8 452 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 KIAA0895LQ68EN5 471 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 MIS18BP1Q6P0N0 1132 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 CRIP3Q6Q6R5 217 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 MTHFD1LQ6UB35 978 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 Q6YL49 198 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.23□□□□□ -1.41
SMAD5-203ENST00000507245 MYCT1Q8N699 235 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 C11orf44Q8N8P7 122 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 NECAB1Q8N987 351 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 USP38Q8NB14 1042 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 ACTRT2Q8TDY3 377 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 DNAJB3Q8WWF6 145 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 SEPT8Q92599 483 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 TOP1MTQ969P6 601 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 RSPRY1Q96DX4 576 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 SCLT1Q96NL6 688 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 RAD9AQ99638 391 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 IFIH1Q9BYX4 1025 aaKnown RBP6.23□□□□□ -1.41
SMAD5-203ENST00000507245 TMEM8AQ9HCN3 771 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 TRIM36Q9NQ86 728 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 ZNF302Q9NR11 478 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 DKK3Q9UBP4 350 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 KCNJ14Q9UNX9 436 aa6.23□□□□□ -1.41
SMAD5-203ENST00000507245 IGKV6-21A0A0C4DH24 114 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 AQP12BA6NM10 295 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 VWC2LB2RUY7 222 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 KIF28PB7ZC32 967 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 DDX39AO00148 427 aaKnown RBP6.22□□□□□ -1.41
SMAD5-203ENST00000507245 SLC37A4O43826 429 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 TDP2O95551 362 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 MMP1P03956 469 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 ERBB2P04626 1255 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 LINC00271P0C7V0 271 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 GCFC2P16383 781 aaKnown RBP6.22□□□□□ -1.41
SMAD5-203ENST00000507245 XBP1P17861 261 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 TACR2P21452 398 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 GRIA3P42263 894 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 GRK6P43250 576 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 PPM1FP49593 454 aaPredicted RBP6.22□□□□□ -1.41
SMAD5-203ENST00000507245 SEC24CP53992 1094 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 ALDH18A1P54886 795 aaKnown RBP6.22□□□□□ -1.41
SMAD5-203ENST00000507245 POLE2P56282 527 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 MRPS6P82932 125 aaKnown RBP6.22□□□□□ -1.41
SMAD5-203ENST00000507245 PPP2R5CQ13362 524 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 ATP1A4Q13733 1029 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 CLCA4Q14CN2 919 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 ST3GAL2Q16842 350 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 EARS2Q5JPH6 523 aaKnown RBP6.22□□□□□ -1.41
SMAD5-203ENST00000507245 LRCH2Q5VUJ6 765 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 ABLIM2Q6H8Q1 611 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 ZNF551Q7Z340 670 aaPredicted RBP6.22□□□□□ -1.41
SMAD5-203ENST00000507245 NEK8Q86SG6 692 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 MAFAQ8NHW3 353 aaPredicted RBP6.22□□□□□ -1.41
SMAD5-203ENST00000507245 TRAPPC12Q8WVT3 735 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 LINC00476Q8WZB0 136 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 WASF1Q92558 559 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 ZBTB10Q96DT7 871 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 VPS50Q96JG6 964 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 FAM20AQ96MK3 541 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 LLPHQ9BRT6 129 aaKnown RBP6.22□□□□□ -1.41
SMAD5-203ENST00000507245 TEKT3Q9BXF9 490 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 MYLK2Q9H1R3 596 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 UNC45AQ9H3U1 944 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 SYBUQ9NX95 663 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 IGSF9Q9P2J2 1179 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 VPS51Q9UID3 782 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 SLC27A6Q9Y2P4 619 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 INSL6Q9Y581 213 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 TRPV2Q9Y5S1 764 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 HS3ST3A1Q9Y663 406 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 MYO9BQ13459 2157 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 PLXNA4Q9HCM2 1894 aa6.22□□□□□ -1.41
SMAD5-203ENST00000507245 VCANP13611 3396 aa6.21□□□□□ -1.42
SMAD5-203ENST00000507245 KRTAP4-8A0A0G2JLE6 195 aa6.21□□□□□ -1.42
SMAD5-203ENST00000507245 WDR27A2RRH5 827 aa6.21□□□□□ -1.42
SMAD5-203ENST00000507245 LINC01553A4QN01 128 aa6.21□□□□□ -1.42
SMAD5-203ENST00000507245 EPOPA6NHQ4 379 aa6.21□□□□□ -1.42
SMAD5-203ENST00000507245 QSOX1O00391 747 aa6.21□□□□□ -1.42
SMAD5-203ENST00000507245 SYT5O00445 386 aa6.21□□□□□ -1.42
SMAD5-203ENST00000507245 MAGEB2O15479 319 aa6.21□□□□□ -1.42
SMAD5-203ENST00000507245 ASNA1O43681 348 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms